Oncorhynchus keta (chum salmon): 118397450
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Entry
118397450 CDS
T09424
Name
(RefSeq) serine/arginine-rich splicing factor 1B-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03040
Spliceosome
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118397450
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118397450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118397450
Spliceosome [BR:
oke03041
]
Common components
Common spliceosomal components
SR proteins
118397450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
118397450
NCBI-ProteinID:
XP_035648087
LinkDB
All DBs
Position
18:complement(21504061..21510954)
Genome browser
AA seq
254 aa
AA seq
DB search
MSGGVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFIEF
EDPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGFGGGGGGGVGGAPRGRYGPPSR
RSEYRVIVSGLPQSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDN
TKFRSHEGETAYVRVKVDGPRSPSYGRSRSRSRSRSRSRSAASRSRSNSRGGGTRGGRGS
PRYSPRHSRSRSHS
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggcgtcgtgcgaggccctgcaggaaataacgattgtcgtatttacgtcgga
aatctaccccctgatattcgcaccaaagatgtcgaggacgtgttttacaaatacggagcg
attcgcgacatcgacttgaaaaatcggagaggaggacctccctttgcctttatcgaattt
gaagatcccagggatgccgacgatgcagtgtacggacgagacggctatgactacgacggt
tatcggctgcgagttgaattccctcggagcggcaggggtggggggagaggcggttttggt
ggtggtggtggtgggggggttggtggcgcccctagaggcagatacgggccgccatccaga
cgctccgagtacagggtcattgtctcagggcttccccagagtggcagctggcaggacctc
aaggatcacatgcgtgaggctggggatgtatgttatgctgacgttttcagagatggaact
ggggttgtggagtttgtgcgcaaagaagacatgacctacgccgttcgaaagctggataac
accaaattccgatcacacgagggagagaccgcttacgttcgcgtgaaagtagatggtccc
cgcagcccgagctatggaagatcacgttccaggagccgcagtcgaagcaggagccgcagc
gcagcaagtcgcagccgcagcaactctcgcggaggtggtacccgtggtggcagaggatct
cctcgctactctccacgccatagccgctctcgctcccattcctaa
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