Oncorhynchus keta (chum salmon): 118397485
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Entry
118397485 CDS
T09424
Symbol
tubd1
Name
(RefSeq) tubulin delta chain isoform X1
KO
K10390
tubulin delta
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118397485 (tubd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118397485 (tubd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118397485 (tubd1)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
118397485 (tubd1)
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
118397485 (tubd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_2
DUF6575
Motif
Other DBs
NCBI-GeneID:
118397485
NCBI-ProteinID:
XP_035648156
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All DBs
Position
18:24393469..24399977
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AA seq
446 aa
AA seq
DB search
MSIVTVQLGQCGNQVGQELFEVISNDANDTQRKVYSECSSERFFNETANRELVARSVLID
MEPKVISQSIAKTAKSGKWRYGDRSHFSQKQGSGNNWANGYCVHGPRHEEVVMDIVRREV
EHCDCLAGIVAMMSVAGGTGSGVGTYVTRCLRDAYPNSFILNHLTWPYGTGEVIVQNYNS
VLTLSHLYQLSDAILVHENDTVHKICAQLMNIKHISFRDVNKVIAHQLGSVLQPALTGDS
HGIYNRNPIGELMSSLVCHPEYKLLSVCNIPQVSSSSMAYSMFTWPGLLKHLRQMLIANS
KMEEGIDWQVRAPSLQSEGIERTGSHRRPGFNTSLANLLILRGKDVNNAEISGFHHPSLY
TPWLPADEAFSMWKTPVPFNKYEKSAILVSNSQTLLRPLDNMVGKAWNMFASRAYIHQYT
KFGISEEDFLDSFTSLEQVISSYSQL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcgtgacagtgcaacttggacaatgtggcaaccaggtaggccaagagttgttc
gaggtgatcagcaatgatgcaaatgatacgcaaagaaaggtttacagtgaatgcagcagt
gagcgtttcttcaatgagactgcaaatagagaactcgtggcaaggtcagtgctgattgac
atggaacccaaagtcatctcacagagtattgcaaagactgccaaatctgggaagtggaga
tatggggaccgttcacacttcagtcagaaacagggttctggaaacaactgggcaaatgga
tactgtgtccatggaccacgtcatgaggaggtagtgatggacattgtgaggagggaggtg
gagcactgtgactgtctggcaggaatcgtggccatgatgagtgtggcagggggcacaggg
tcaggggtgggcacatacgttactcggtgtcttcgggacgcctacccaaactccttcatc
ctcaaccacctgacatggccctatggcactggagaggtgatagtccagaactacaactct
gtgctcacactgtcacacctctaccagctctcagatgccatcctggttcatgaaaatgac
acggttcacaagatctgtgctcagctcatgaatatcaaacacatatcattcagggacgtc
aacaaagtcatcgcccaccagctagggagtgttctgcagcctgcactcactggtgactcc
catggtatctacaatagaaaccccataggtgaactgatgagcagcctggtgtgtcaccca
gagtacaagcttctcagcgtgtgcaacattccccaggtgtccagctcctctatggcttac
agcatgttcacctggccgggcctgctcaaacatctacgtcagatgctcattgccaactcc
aaaatggaggaaggcatcgactggcaggtgcgagccccctctctccagtctgaagggata
gagaggaccgggagtcacagacgaccaggcttcaacacctccctggccaacctgctcata
ctgcgggggaaggatgtgaacaatgcagagataagtggatttcaccatccgagtctatat
accccctggcttccagcagatgaggctttcagcatgtggaaaaccccagtcccgtttaac
aagtatgagaagtctgctatactggtcagcaacagtcagactctgttgaggcctctggac
aacatggtggggaaagcctggaacatgtttgcctccagggcctacattcatcaatacact
aagttcgggatctcagaggaggatttcttggatagcttcacgtctcttgaacaggtcatc
tctagctacagtcaactttga
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