Oncorhynchus keta (chum salmon): 118397536
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Entry
118397536 CDS
T09424
Name
(RefSeq) tsukushi-like isoform X1
KO
K08130
tsukushi
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oke00535
]
118397536
Proteoglycans [BR:
oke00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
118397536
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRR_LRWD1
LRR_EndoS
LRR_RPS2
LRR_9
LRR_NXF1-5
LRRNT
Motif
Other DBs
NCBI-GeneID:
118397536
NCBI-ProteinID:
XP_035648304
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All DBs
Position
18:complement(26977868..26987769)
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AA seq
373 aa
AA seq
DB search
MIHFSGTTRMSLTVSEKSSGCKRTMAFPLCVSLWMLLAVHCQGRAVKNCHPSCHCEVESF
GLFDSFSLTRVDCRGVGTSPIPIPLDTAHLDLSANSMSLLTDTMLSGPGYTTLVSLDLSN
NRISMVSPKALSRLRYLESLDLSHNSLEGLDEGCFSGLPLAEVDLSHNHFREFDLDMFIT
KGHGEPINVDLSHNQLTVVSRSSSRSPLLHVQSLTLAANQLRAVPKLKGIPLRDLSLDGN
SISHIEEGAFEDLKDLVHLSLSALPELFDIQPNSFRGLQNLQVLDLSNNAKLKALSPAVF
SGLVSLQELNLSNSGVTSLPNNMLSHLPSIKSITLGQNIHCWRAQKQGQFHRQLGQEQKH
DEVLTCDVKGIVS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgattcatttctcaggtaccacacggatgagtttgacggtctcagaaaagtcgtcaggc
tgcaagcgcacgatggcgttccccctgtgtgttagtctgtggatgctcctggctgttcac
tgccagggtagagctgtgaagaactgccacccaagctgccactgtgaggtggagagcttt
ggcttgttcgacagcttcagcctgaccagggtggattgcaggggagtgggcaccagtccc
atccccatccccctggacactgcccacctggacttgtccgccaactccatgtccctgctg
accgacactatgctctctggacctggctataccaccttggtcagcctggacctcagcaac
aatcgcatatccatggtcagccccaaggccctgtccaggctgcgctacctggagtctctg
gacctcagccacaactccctggagggcctggatgagggctgcttctctggcctccctctg
gctgaggttgacctcagccacaaccacttccgggagtttgacctcgacatgttcatcact
aaaggtcacggagagccaatcaacgtggatctgtcccacaaccagctgacggtggtctcc
aggagttcctctaggagccccttgctacatgtccagagcctgactctagcagccaatcag
ctgagggccgtgcctaagctcaaaggcatcccgttgagggacctaagcctggatgggaac
agtatctcccacattgaggagggggcctttgaggacctcaaggacctggttcacctatcc
ctcagtgcgcttcctgagctctttgacatccagcctaacagtttcagaggccttcagaac
cttcaggtcttggacctgtccaacaacgccaagctaaaggcactgagcccagctgtgttc
agtggacttgtgtctctacaggagctcaatctgtccaactctggagtaacgtcattgcca
aataacatgctaagtcacttgccaagcatcaagagtatcaccctgggccagaatatccat
tgttggagggctcaaaagcagggccagtttcacaggcagcttggacaggaacagaaacat
gacgaggtgctgacctgtgacgttaaaggcattgtgtcgtga
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