Oncorhynchus keta (chum salmon): 118397552
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Entry
118397552 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 1-like
KO
K03260
translation initiation factor 4G
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118397552
03012 Translation factors [BR:
oke03012
]
118397552
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118397552
mRNA cycle factors
Stress granule specific factors
118397552
Translation factors [BR:
oke03012
]
Eukaryotic type
Initiation factors
eIF-4
118397552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
DUF3689
Motif
Other DBs
NCBI-GeneID:
118397552
NCBI-ProteinID:
XP_052323855
LinkDB
All DBs
Position
18:complement(30810240..30907806)
Genome browser
AA seq
1741 aa
AA seq
DB search
MNKAPQPITGPPSATHPAPSPGIQQATFPPGQPPSVVFATPPPQMNTAPQHRQFAPGHRA
LHQQGGFRSLQPYYSRPSNAPRVPPSSTPRPVAPTHVYQPGQQMMMIPSQQIPFPNQQGP
AYFIPGQYRSTYVATPQQYPVPPGTPGFYPGTSPAEYGTYAGAYYPAQQQYTSSVPAAPV
IMNPPPQQQQPPPQQQIHPKRERKQIIIRDPNQGGRDITEEIMSGGTRSGTTPTPPQVSD
DSSESSISGSEGPAVGQADGENVTPVVVRPDDRGNPAATLITGPPALSKTPELVKTYPAP
TEVKLPDTNIKSPSLSQDLPTPLSVTTSHHTTVPTTPQPSTSSIADMMDAPAAAPTPSAP
EVPAYPAPLPEPRPTPAAEEHPSAAKEEREEVNIKEEVAEARQEVTTSSKPEPSLAPVIT
PRSSTNGISATQPPSQGGGASSPVHQHAHPPGSRTPPGVSHRPARGAQAAQWPAAPQPQD
PEKMSAESSECDVSPIAEPEVAQLLSEAPMPKLTHVAVTATPAPVAQATPAPVAQATPAP
VAQATPAPVAQATPAPVAQATPAPIAQAPPVLAETATTTVVTAPRVEDEMDSPPPQSTTP
AGESSMQAAVSVPKKKRKMKDLNKKEAVGDLLDAFKEEQVVESTPEPEQATPTSASDAKE
PRPANTPAVEEVDETWEEKEDKLDAENIEPKPEDLKYQYKEELCRPIDPEEKKRYDRDFL
LGFQFISAAMSKPEGLPQISDVVLDKANKAPLRQLDPSRLPGMNMGPDFTPSFANLGRPG
MGGGGGGHRGGPPSGMGGGGPRRSQQGQRKEPRRIINISSSLTEDVKLNKAEKAWKPAVK
KATSGQAAPEEESDDSEQAKTQELFKRVRSILNKLTPQMFQQLMKQVTELTIDTEERLKG
VIDLIFEKAISEPNFSVAYANMCRCLIGLKVPTTDKPGVTVNFRKLLLNRCQKEFEKDKD
DDVIFEKKQKELDAAATEEKDRLKAELEEAKDKARRRSLGNIKFIGELFKLKMLTEAIMH
DCIVKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMDQYFAQMDKIIKEKKTSSRIRF
MLQDVLDLRRNTWVPRRGEQGPKTIDQIHKDAELEEHREVLKVQQQLLNQNTRGGVGGRG
GGGRDQGSRGGQHPQTGQRSQPQDEGWNTVPISTKSRPIDTSRLSKITKPGALDFNNQLL
APQLGGKGMWGSWGKGSSGGTTGAKPAGEATPESGGRPATSTLNRFSALQPQQPSSSGPS
HDSDRRVPQRNSSSRDRGSDRFERHDRGSNDRFDRRDDRRDDRDRNRPPVTKRSFSRETV
EHSREREHSGPADPVRRVASMTDDRSSRDRARSKDNVKREATLTPPPAQNKPALSEEMLE
KKSTAIIEEYLHINDMKEALQCVVEMNSTPLLFVFVRSGLESTLERSPIVRERMGLLLHQ
LYKAGTLPKEQYYRGLQEILEVAEDMAIDVPHIWLYLAELITPMLHEGGIPMGQLFKEIS
KPLVPQGAAGVLLVQILTLLCKGMSHKKAGAMWREAGLSWKDFLPEDEDVNKFVTEKNVE
FTLGEGGDETEKSSKKELSSEELNKQLDRLIQDKADNQRIYDWVEANLDETQMSSNMFVR
SVMTSICQSAIICENPYKLDAKVITRRAKLLHKYLKDEQKELQALYALQALMVEMEQPAN
LLRMFFDTLYDEDVINEESFNKWESSKDPAEMQGKGVALKSVTAFFTWLREAEDEESDNN
S
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaccacagcctataacgggacccccctctgccacccaccctgccccctcc
cccggaatccaacaggccaccttccctcctggacaacccccttctgttgtctttgccacc
ccacctccacaaatgaacacagcaccacagcaccgacagtttgcccccgggcaccgtgct
ttacaccaacagggaggattcaggtcactgcagccgtactacagccggcccagcaatgcc
ccccgggtgccccccagcagcacgccaaggcctgtggcgcccacacacgtctaccagccg
ggccaacagatgatgatgatcccctcacagcagatccccttccccaaccaacagggccct
gcctacttcattcccggacagtaccggtcaacgtacgtggccacccctcagcagtacccg
gtcccaccgggcactccaggcttctacccaggcaccagcccagctgaatatggtacatat
gcaggggcatactacccggcccaacagcagtacacgtcctccgtgccagctgctccggtc
atcatgaaccctcccccccagcagcagcaaccacctccacagcaacagatccatcccaaa
agggagcgcaaacagatcataatacgagaccctaaccagggtggtagagacataactgag
gagattatgtcagggggcacccgcagtggcaccacccccacacccccacaggtgagcgac
gattcttcagagtcgtctatatctggatcagagggcccagccgttggccaggccgacggg
gagaacgtgacacctgtcgtggtcagaccagatgaccgagggaatcctgcagccactctc
ataactggccccccagccctgtctaaaacccctgaactggtcaagacttaccctgcccca
acagaggtcaaactcccagacacaaacattaaatccccttccttatcccaggacctaccc
acacccctgtcggtaactaccagccaccacactactgtccctactaccccccaaccctca
actagttccattgcagacatgatggacgctccagccgctgctccaaccccatctgcccct
gaagtgcccgcttaccctgcacccctgcctgaaccccgccccactcctgcagctgaggag
catccctcagctgccaaggaggagcgggaggaagtgaatattaaagaggaggtggcggag
gctaggcaggaggtgactacatcatccaaacctgagccttcccttgctccagtgatcacc
cctaggagcagcactaatggtatctctgccacccagccccccagccaaggaggaggagcc
agcagccctgtccatcaacatgcccaccccccaggcagcagaaccccccccggagtctcc
catcgcccagccagaggagctcaggctgcccaatggcctgccgctccccagccccaggac
cctgagaagatgtctgcggagtcgtccgagtgtgacgtcagccccattgctgagcctgag
gtggctcagttactgagcgaggcacccatgcctaaactgacgcatgttgcagtcacagca
acgcccgcccccgttgcccaggccacgcccgcccccgttgcccaggccacgcccgccccc
gttgcccaggccacgcccgcccccgttgcccaggccacgcccgcccccgttgcccaggcc
acgcccgcccccattgcccaggcaccgcctgtcctagctgagactgctactactacagtt
gtaactgctccccgtgtagaagacgagatggactctccaccaccacagagcaccacccca
gccggggagagttctatgcaagctgctgtttctgtgccaaaaaaaaagaggaagatgaag
gatctgaacaagaaggaggctgttggagacctcctagatgcctttaaggaggagcaggta
gtggagagcactcctgagccagagcaggccacacccacttctgcctctgacgctaaggag
ccccgcccggccaacacccctgcagtcgaagaggtggatgagacgtgggaggagaaggag
gacaaactggatgcagagaatatcgaacccaagcccgaggatctgaagtaccaatacaaa
gaggaactatgtcggcctatagacccagaggagaagaagaggtatgacagggacttcctg
ctgggcttccagttcatcagtgccgccatgtccaagcctgagggcctgcctcagatcagt
gacgtggtgctggacaaggcgaataaggcccctctccgccagctggaccccagccgtttg
ccagggatgaacatgggccccgacttcacaccgtcgtttgccaacctgggcaggcctgga
atgggaggaggtggaggtggccacagaggagggccaccctctggtatgggtggtggagga
ccgcgtcgctcccaacagggtcagcgtaaggagcccaggaggatcatcaacatctcttcg
tctctgacggaagacgtgaagctcaacaaggctgagaaggcctggaagcccgctgtcaag
aaggctaccagtgggcaagctgctcctgaggaggagagcgacgactcggaacaggccaag
acccaggagctgttcaagagggtccgtagtatcctgaacaagctgacccctcagatgttc
caacagctgatgaagcaggtcacagagctgaccatcgatacagaggagaggctgaaggga
gtgatagatctgatctttgagaaggccatctctgaacccaacttctccgtggcctacgcc
aacatgtgccgctgccttattgggctcaaagtccccaccacagacaagccgggagtcact
gtgaatttccgcaagctgcttctgaaccgctgtcagaaggagtttgagaaggacaaggac
gatgatgtcatctttgagaagaagcagaaagagctggacgctgcagccacggaggagaag
gatcgcctgaaggcagagctggaggaggccaaagacaaggcgcggcggcggtcgctaggc
aacatcaagttcattggtgagctattcaagctgaagatgctgacggaggccatcatgcat
gactgcatcgtcaagctgctgaagaaccacgatgaggagtcactagagtgcctctgtaga
ctcttgtcaactataggcaaggacctggactttgaaaaggcaaagccacgtatggaccag
tactttgcccagatggacaagatcatcaaggagaagaagacatcgtccagaatccgcttc
atgctgcaggacgtactggatctcaggaggaacacgtgggtccccaggagaggagagcag
ggccccaagaccatagaccagatccacaaggatgctgagctggaggagcacagggaggtt
ctcaaggtgcagcagcaactcctcaaccagaacacccgaggaggagttggaggacgtggt
ggtggaggaagagatcaggggagccgcgggggccaacacccccagacgggccaaaggagt
cagccccaggacgagggctggaacacagttcccatctccaccaagagcagacccatcgac
accagccgactcagcaagatcactaagcccggggctttggacttcaacaaccagctgctg
gcgccccagctcgggggtaagggcatgtggggcagctggggcaagggcagcagtggaggc
accaccggagccaaacccgctggtgaagccaccccagagtcaggaggccgcccagccacc
agcaccctcaacaggttctcagcattgcagccacagcagccctcctcctcagggccctca
catgactcggacagaagagttcctcagaggaacagctcgagccgggaccgtggcagcgac
agattcgagcgtcatgaccgtggcagcaacgaccgcttcgacaggcgggatgaccggcga
gacgaccgggacaggaaccggcccccggtcaccaagcggagctttagcagggagacggtg
gagcacagcagagagagggagcacagcggccctgctgatccagtacgccgtgtagccagc
atgaccgatgatcggagcagcagagaccgagccaggagcaaagacaatgtgaagagggaa
gctactctgaccccccctcctgcccagaacaaacctgccttgagtgaagaaatgctggaa
aagaagtccacagctatcatagaggagtacctacacatcaacgacatgaaggaggcgctg
cagtgtgtagtggagatgaacagcaccccgctgctctttgtatttgtacggagtggtcta
gagtccactctggagcgcagccccatcgtcagagaacgcatgggcctgctgctacaccag
ctgtacaaggcagggaccctgcccaaagagcagtactacagagggcttcaggagatactg
gaggtggcggaggacatggccatagacgtcccccacatctggctctacctggctgagctt
atcacccctatgcttcacgaaggaggcatccccatgggacagctcttcaaggagatatcc
aagcccctggttcctcagggggcggctggagttctgctggtccagatcctcaccttactc
tgcaaaggaatgagccataaaaaggcaggcgccatgtggagggaggcggggcttagctgg
aaagactttctgcctgaggacgaggacgtcaacaagtttgtgacagaaaagaatgtggag
ttcaccctgggagaaggaggagatgagacagagaagagcagtaagaaagagctgagctca
gaggagctgaacaaacagctggacagactcatacaggacaaggctgacaaccagaggatc
tatgattgggtcgaggctaacctggacgagacgcagatgtcctccaacatgtttgtcaga
tcagtcatgacatccatctgccagtcagccatcatctgtgagaacccttacaagttggat
gcgaaggtgatcacccggagggccaagctgctccacaagtacctgaaggatgagcagaag
gagctgcaggctctctacgccttgcaggccctcatggtggagatggagcagcctgccaac
ctgctgcggatgttctttgacacgctgtatgatgaggacgtgatcaacgaagagtccttc
aacaagtgggagtccagcaaggaccccgcagagatgcagggtaagggtgtggccctgaag
tccgtcaccgccttcttcacctggctccgtgaggccgaggacgaggagtctgacaacaac
agctag
DBGET
integrated database retrieval system
