Oncorhynchus keta (chum salmon): 118397727
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Entry
118397727 CDS
T09424
Name
(RefSeq) iroquois-class homeodomain protein irx-4-B-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118397727
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
118397727
BRITE hierarchy
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GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
118397727
NCBI-ProteinID:
XP_035648518
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Position
19:25828862..25834506
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AA seq
470 aa
AA seq
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MFDIMAYPQLGYPYSPTHPFLMSTSSLANCLEPGGRSLLDSGVMPPSPQPLRCPVYESRL
LGSPGQELPTPAIGLGVYGAGYGKSQGYYGTCGGDATALYARGTLESKDGAAAHVGASQT
PAYYPYDYAFGQYPYDRYGYGSSVDSAAARRKNATRETTSTLKAWLQEHQKNPYPTKGEK
IMLAIITKMTLTQVSTWFANARRRLKKENKVTWSPRANKSSDERGCDDDSDSAEGSQEEE
PIKSEIDVDDSVTARCVDLQQSDLEDFDLLESDGSDCDPKHQFHTNDTPVHTPPDHHHHP
KDPSTSPLRHTPDTSRHGNERLPLSADCPKHTPEHNRTTNSFYTQQDLQSTESSKPKIWS
IAQTAAIQPEFPACMHTATPSESLSPRGYPTEVPHLKVGSAGQQDSPVTTLRDWVDGVFH
DPLFRQSSFNPVLSKPAMDRAWIGLNRQVMEGRTLGQRSVEHVTSSLQNV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatatcatggcttacccgcagttaggatatccctactcccccacacacccgttc
ctcatgagcacgagctctctggccaactgcctcgagcctggcggaaggtctctcctggac
tccggtgtgatgcctccctctccccagcctctccggtgtccggtgtacgagagcagactg
ctcggctccccgggccaagagctaccaaccccggctataggtctgggtgtgtacggagct
ggctatggaaagagccaggggtattatggcacctgcggaggcgacgcaacagccttatat
gccaggggaacattggagtccaaagatggagcggctgcgcatgtgggggcctctcaaacc
cctgcttactatccgtacgattacgcatttggacagtatccatatgaccgatatgggtat
gggtcatcagtggacagtgcagctgcccggaggaagaacgctaccagggagaccaccagc
actctgaaggcctggttgcaggagcaccagaagaacccgtatcccaccaagggagagaag
atcatgctggccatcatcaccaagatgacactcacacaggtgtccacgtggtttgccaat
gcacggcggaggctgaagaaggagaacaaagtcacatggtcaccacgagccaataagagc
tctgacgagaggggctgtgatgatgacagcgacagtgcagagggatcacaagaggaagag
ccaatcaaaagcgagatagatgttgatgattctgtaacagcgaggtgtgtggacctacaa
cagagtgatctggaggactttgatctgcttgagtcggatggttctgactgcgaccctaaa
caccagtttcacaccaacgacaccccagtacacacaccaccggaccaccaccaccacccc
aaagacccttctaccagcccactcagacataccccagacacatcccgacacgggaacgag
cggttgccactgtcagcagactgtcccaaacacacaccagagcacaaccgtacaaccaac
tcattctacactcaacaggacctgcaaagtacagagagcagcaaacctaaaatctggtcc
atcgcacaaactgctgctatccaacctgaattccctgcatgcatgcacacagccaccccc
agcgagtctctctccccaagggggtatccaactgaagtaccccacctgaaggtggggtcg
gctgggcagcaggactcgccggtgactaccctcagagattgggtggacggggtcttccac
gaccccctgttccgacagagttcctttaaccctgtgttgtccaagccagccatggacagg
gcatggattgggttaaatagacaggtgatggaaggcagaactctgggacaacgttctgtt
gaacatgttacttcgtctttgcagaatgtatag
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