Oncorhynchus keta (chum salmon): 118397736
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Entry
118397736 CDS
T09424
Name
(RefSeq) zinc-binding protein A33-like
KO
K12012
tripartite motif-containing protein 35
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118397736
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118397736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
Prok-RING_4
zf-RING_2
DUF4200
zf-RING_5
Baculo_IE-1
ATG17_like
Rogdi_lz
zf-RING_6
Apolipoprotein
FUT8_N_cat
DUF6376
DUF3450
DUF1664
DUF2959
Cas_DxTHG
FAD-SLDH
ATPase
Exonuc_VII_L
End3
Motif
Other DBs
NCBI-GeneID:
118397736
NCBI-ProteinID:
XP_035648524
EnsemblRapid:
ENSOKEG00005012681
LinkDB
All DBs
Position
19:34248769..34251277
Genome browser
AA seq
466 aa
AA seq
DB search
MTSIVSLPEGNLSCSVCRDIFKDPVILSCRHGICKVCLLELWKHNEVLECPLCRRRSSLE
LPLDLNLKRQCEAVLQERSRGDTTESEVLCNLHNEKLELFCLEDKQLLCLKCRALKKNTN
DGLCQIDKAAKNYKEKLQTALKSLQGNLKAFNKVIQSCDQAAENIKSQAQHTEKQIKKEF
EKLHQFLRDEEADSVAALREEEEQKNKTVREKIEEMCREISSLSETIRAIEEELRAEDIS
FLQNYKVTMKRTQYTMPDLERVSGPLINVAKHLGNLQFKVWERMQEIVQYTPVTLDPNTA
HPRLRLSEDLTSVRDSDDIQWLPVNPERFDHLQFVLASEGFNSGTHSWLVEVGESENWTI
GVITDSVQRSGLIKSGYWSVGYYEGKYWALCPPVPPTDITLRQKPKQIRVHLDCDRGKLS
FSDPDNNTRLHAFTQHFTERVSPFIGNYCELHSLKILPLKVSVTVV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccatagtatctctcccagaggggaatctctcctgttctgtgtgccgtgacatc
ttcaaggacccggtcatcctgtcatgtagacacggcatctgtaaagtctgcttgttggaa
ctgtggaaacataacgaagtgctggaatgccctctctgtagaagaagatcatcgctggag
cttccacttgatctgaatctgaagaggcagtgtgaggctgtcttacaggagaggagtcgg
ggagatacgactgagtctgaggtgctctgcaatctgcataatgagaagcttgagctcttc
tgtctggaggataaacagctactgtgtttaaagtgtagggccttaaagaaaaacaccaac
gacggcctttgtcagattgataaagctgctaagaattataaggagaaactccagactgca
ctaaaatccttacagggaaacctgaaggcctttaacaaagttatacaatcctgtgatcaa
gcagcagaaaatatcaagagccaggctcagcacacagagaagcagattaagaaggagttt
gaaaagcttcatcagtttctaagagatgaagaggcagatagtgtagctgcactgcgggag
gaagaggagcagaagaataagacggtgagggagaagattgaagagatgtgcagagagata
tcatcactgtctgaaacaatcagagccatagaagaggagctgagagctgaagacatctca
ttcttgcagaactacaaggtcacaatgaaaagaacccagtacacaatgccggatctagag
agggtgtcaggtccacttatcaatgtggcaaagcacctgggcaacctgcagttcaaagtc
tgggagaggatgcaggagattgttcaatatactcctgtgactctggaccccaatactgcc
catccgcgtctccgcctgtctgaagatctgaccagtgtgagagacagtgatgatatacag
tggcttcctgtcaacccagagaggtttgatcacctccagtttgtcctggcctctgagggc
tttaactcagggacacacagctggcttgttgaggttggggagagtgaaaactggaccata
ggtgtgatcacagactctgtccagaggtctggattgataaagagtggatactggagtgtc
ggatattacgaaggtaaatactgggcattatgcccacctgttccacccactgatatcaca
ttgagacagaaacctaagcagatcagagtgcatctggactgtgacagaggaaagctgtca
ttctcggaccctgataataacacacggctacacgcgttcacacaacatttcacagagaga
gtctctccatttattggtaattactgtgaactccactctctaaagatcttaccactgaag
gtctctgtaacagtggtttag
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