KEGG   Oncorhynchus keta (chum salmon): 118397872
Entry
118397872         CDS       T09424                                 
Name
(RefSeq) afadin-like isoform X1
  KO
K05702  afadin
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04517  IgSF CAM signaling
oke04520  Adherens junction
oke04530  Tight junction
Brite
KEGG Orthology (KO) [BR:oke00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    118397872
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    118397872
   04530 Tight junction
    118397872
SSDB
Motif
Pfam: RA DIL PDZ FHA PDZ_6 RA_2 PDZ_2 RA_3 RASSF8-10_RA Yop-YscD_cpl
Other DBs
NCBI-GeneID: 118397872
NCBI-ProteinID: XP_052326945
LinkDB
Position
19:63676513..63818679
AA seq 1944 aa
MSGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERKLDLDEKPLVVQLNWNKD
DREGRFVLKNENDIIPKKAQSNGPEREKEGVMQNFKRTLSKKEKKKEKKREKEAHISDGD
EQALSREDGENSRLAAEVYKDMPENSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRP
DSGGTLRIYADSLKPNIPYKTILLSTTDMADFAVVEALEKYGLEKENPREYCIARHTDDK
SGKEIILDDTECPLQIFRDWPNDRGDLVFQLKKRPPDYVPKKGRKPEDKGPRGKGMDVPL
HGSLPPEKLPYLVELSPGRGNHYGYYTYRHHEDGSDSRDKPKLYRLQHSVTEVGSDTTDD
GSIQLFGPGILPHHCKLMHTEGLVTVTPHSLEAETYVDGQRVTETTVLRSGATLQFGASH
VFKFVDPSYDHSMGKGGPGPMMRGRHKSGSVPETTFDLQGDLHSGTALSTSKSSGKLEME
RPSNGSERGMVKPMIRGEQQDSRSQDSLSPEVTLPASIEFRDNSEDTFLTAIINYTNSST
VHFKLSPTYVLYMTCRYVMSSHYRPDIGPSERTHKVIAIVNKMVSMMEGVIQEIPEADQK
QKNIAGALAFWMANASELLNFIKQDKDLSRITLDAQDVLAHLVQMAFKYLVQCLQSDLSN
YMPAFLDDPEEQNPQRPKIEDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFN
KLVMEADSGLCSHYWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSM
QDVQNIHNTCFKLNSLQLNALMTNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGRE
VQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGFQEFLDPLCQRGFCRLTPHPRSPGTWTIH
FEGVDCDSHFSADNSDLQMRKEPEVVTVTLKKHNGMGLSIVAAKGAGQDKLGIYIKSVVK
GGAADMDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATL
LNQPSPMMPRASQGGRDKNGKLRPKSEGFELYNNSVQNGSPESPQADWQAYPEPKKMSGE
ERLLKNRADHRSSPNVANQSQSPGGKAVYTRGPGTKITSVSTGNLCVDDEPSPPHPEAYP
IPTQTYPREYFTIPASKSTNRMDSAPGQIYADDRGPHGPMEDHHHNSIAMQRVDHSQEEL
CDLPGGYPPTGLRPEDLVHLHQQQQREADYQRGSGEHWVNHHQVSSSVESSTSSQEHLNY
SSSSSNKTQSNHKSGPGRWKTPGPIAPHPGPVAQATRTDLPPPPPPPVHYQDFELQPDLP
LPPPPSATQQQAAAAAADRKKREEQQRWYEKEKARLEEERERKRREQERKLGQVRNPAVP
VAHNNNNQHGGTLPPPTQHQQMPPPRSPMQQVPHPYLPSQGQQQAQQQQPPRPEKLSTLP
RAGTLPPQGNPMDTVIRELLPQQQPRTIERRDLQYITISKEELSSSDSLSPDPWKRDARE
KLEKQQQLHIVDLLDREIQDLQAKPERTAEESDRLRKLMLEWQFQKRLQESKQSDEEDEE
DDDEDVDTMMIMQRLEAEKRARLQDEERRRKQQLEEIRKREAEDRAKQEEERRWREEERA
RREVDEKRRQEEEYYTRLEEGRRRQHEEAERKLLTPDEPGLYRPPLPRDYQPQPPPPTAS
PATTATNAPPPPPQRNTSYLKTQVVSPDALYTAKFVSYNDEEDEDTTGLAGQVKLSSTRK
SYGDLPPAHKPQPPARKPRPMSDGIFLSSSFQPPAVNANSTAGQPPPPPIKPSLSFIPTG
NFKGFNSYTGNTTGVVGLGEVYKDPREKWTKGGQEQENTLTEGAPESMTFKERQRLFSQG
KEVSNKVKASRKLMELENELNTKQ
NT seq 5835 nt   +upstreamnt  +downstreamnt
atgtcggggagcagggaggaggagcggcggaaactagccgatatcattaaccactggaac
gccaaccggcttgacctgttcgagatcagccaacccaccgaggacttggagttccacggt
gtgatgcgtttctacttccaggaccgcgtagcagggaactttgccaccaagtgtatccgc
gtgtcctccacggccaccactcaggatgtcatcgagacgctggccgagaagttccggccc
gacatgaggatgctctcctctcccaaatactccctctacgaggtccatgtcagcggggaa
gaacggaagctggacctggatgagaagccactggttgtgcagctcaactggaacaaagac
gaccgcgagggacgtttcgtcctcaagaatgagaacgacatcatccccaagaaggcgcag
agcaacgggccggagagggagaaggagggggtaatgcagaacttcaaacggacactgtcc
aagaaagagaagaagaaggagaagaagcgagagaaggaggctcacatttctgacggagat
gagcaagcactgagcagagaagatggtgagaactccagactggcggcggaggtgtacaag
gacatgccggagaacagcttcacccggaccatctccaaccctgaggtggtgatgaagagg
aggcggcagcagaaactggagaagaggatgcaggagttccgcagtagcgacggcaggcca
gactctggggggacgttgaggatctatgcagacagtctgaaacccaatatcccctataag
accatcttgctgtccacgacagacatggcagactttgctgtggtggaggctctggagaag
tacggcctggagaaagagaacccccgggagtactgcatcgccaggcacacagatgacaag
tctgggaaggagatcatcctggatgatacagagtgtcctcttcagatcttcagagactgg
cccaacgacagaggagacctagtattccagctgaagaagagacctccagactacgtgcca
aagaagggccgcaagccagaggacaagggccccagggggaagggcatggacgtgcccctg
catgggtctctacccccagagaaactgccttacctggtggagctcagcccagggaggggg
aatcactatggctactacacctatcggcaccacgaagacggctcagactccagggacaaa
ccgaaactctaccgcctgcagcacagtgttactgaggtgggctcagacactacagacgac
ggctccatccagctgtttggtccaggtatcctgccccaccactgtaaactgatgcatacg
gagggtttggtgacagtgacaccacacagtctggaggctgagacttacgtggacggccag
cgtgtcaccgagaccaccgtgctgcgaagcggagccacactgcagttcggcgcctcccac
gtgttcaagtttgtggaccccagctacgaccacagcatgggcaagggagggcccggacca
atgatgagaggcaggcacaagtcaggaagtgttcctgagacgacctttgacctgcaaggg
gacctccacagtgggacggccctctccaccagcaagagctcagggaagctggaaatggag
cgtccatccaacggcagcgagagaggcatggtcaaacccatgatccgcggggagcagcag
gacagcaggtcccaggacagcctgagcccagaagtaacgttgccggccagcatcgagttc
agggacaactccgaagataccttcctgacggccatcatcaactacaccaacagctccacg
gtgcacttcaagctgtcccccacctacgtgttgtacatgacctgtcgctacgtcatgtcc
agtcactaccggcccgacatcggcccctcggagcgcacccacaaagtcatagccatcgtc
aacaagatggtgagcatgatggaaggagtcatccaggagattcctgaagcggaccagaag
cagaagaacattgcgggggccctggctttctggatggccaatgcctcagagctgctcaac
ttcatcaagcaggacaaggatctgtcgcgcatcacactggatgcccaggatgtgctggca
cacctcgtccagatggccttcaagtacctggtccagtgtctgcagtctgacctgagtaac
tacatgcctgccttcctggatgacccagaggaacagaaccctcaaaggcccaaaatagag
gatgttttgcacaccctgacgggcgccatgtcgctgctgcgtcgttgccgtgtcaacgcg
gcactgaccatccagctgttctcccagctcttccacttcatcaacatgtggctgttcaac
aagctggtgatggaggccgactctggactgtgttcacactactggggcgccatcctccgc
cagcagctcagccacatcgaggcctgggcagagaaacagggcctggagctggctgctgac
tgccacctcagtcgcatcgtacaggctacgactctcctcaccatggacaagtactccatg
caagacgtgcagaacatccacaacacctgcttcaagctgaactccctgcagctcaacgcc
ctcatgaccaactaccactgtgctcccgacgagccttacatcccccctgaacttatagac
cacgtggttgccgtggcggagaacacagcagatgagctggctcgtagcgatggccgagag
gtccagctagaggaggaccctgacctgcagctgcccttcctgctgcccgaggacggctac
tcctgcgacgttgtgaggaacattcccaacggattccaggagttcctggaccccctttgt
cagagaggattctgtcggctaacccctcacccgcgctcccctgggacctggaccatccac
tttgaaggagtcgactgcgacagccacttctctgcagacaactcagacctgcaaatgcgg
aaggaaccggaagttgtgacggtcaccctgaagaagcacaatggcatgggcctcagcatt
gtggctgccaagggtgctgggcaggacaagctcgggatctacatcaagtctgttgtgaag
ggaggcgcggctgacatggacgggcgtctggctgcaggggaccagctgctgagtgtggac
ggccgcagcctggtgggcctctcccaggagagggctgcggagttgatgacgaggacaggc
tctgtggtgacactggaggtggccaaacagggagccatctaccacggcctggccacgctc
ctcaaccagccttctcctatgatgcccagagcgtcgcaaggagggcgtgacaagaatggt
aaactgagaccaaagagcgaaggctttgaactgtacaacaactctgtccagaacggctct
ccagagagcccccaggccgactggcaggcctacccagaaccaaagaagatgagcggggag
gagaggctactgaagaaccgggccgaccaccgctccagccccaacgtggccaaccagagc
cagagtccgggagggaaggccgtctacacacgaggacctgggaccaagatcacctctgtc
tccacgggcaacctgtgtgttgacgacgagccctctcctccccatccggaggcctatcct
attcccactcagacctaccccagggaatacttcaccatcccagcctccaagtctacgaac
cggatggactctgccccaggacagatatacgctgacgacaggggtcctcacggccccatg
gaagaccaccaccacaacagcatagctatgcagcgggtggaccactctcaggaggagctg
tgtgacctcccagggggctaccctccaaccggcctgcgtcctgaggacttggtccacctg
caccagcagcagcagagagaggctgactaccagcggggcagtggagaacactgggtcaac
caccaccaggtctcctcctctgtggagtcctccacctccagccaggagcacctcaactac
tcctcgtcctcctccaacaagacccagagcaaccacaagagtgggccgggacgctggaag
acccccggccccatcgctccccacccaggccccgtggcccaggccacacgcacggacctc
cctccaccgccccctccccctgtacactaccaggactttgagctccagcccgacctgccc
ctgccccctcctccctcggccacccagcagcaggccgcagccgccgccgccgaccgcaag
aagcgcgaggagcagcagcgctggtatgagaaggagaaggcccggttagaggaggagagg
gagaggaagaggagggagcaggagaggaagctgggacaggtccgtaacccagctgtgcct
gtagcccacaacaacaacaaccaacacgggggcacactcccccctcccacacagcaccag
cagatgccccctccccggtcccccatgcagcaggtgccccatccctacctcccctcccag
ggccaacagcaggcccagcagcagcagccccccaggccagagaaactgtccaccctgccc
agagcgggcaccctgccccctcagggtaacccaatggacacagtgatcagagagctgctc
ccccagcagcagccccgcaccatcgagcgccgggacctacagtacatcaccatcagcaag
gaggagctgtcttccagcgacagcctgtccccagacccctggaagagagacgcccgggag
aagctggagaagcagcagcagctgcacatcgtagacctgctggacagggagatccaggac
ctgcaggccaagccggagcgtacggctgaggagagtgaccggctcaggaagctgatgctg
gagtggcagttccagaagagactgcaggagtccaagcagagtgatgaggaagatgaggag
gatgacgacgaggacgtggacaccatgatgatcatgcagcggctggaggcagagaagaga
gcaaggttgcaggacgaggagcggcggaggaagcaacagctggaggagatccgtaagcgc
gaagcggaggaccgggccaaacaggaggaggagagacgctggagagaggaggagagggcc
agacgagaggtcgatgagaagaggaggcaggaggaggagtactacacacgtctggaggaa
gggcggcgccggcagcacgaggaggccgagcgcaagctgctgacgcctgacgagcctggt
ctgtacagacctcccctccccagggactaccagcctcagcccccccctcccactgcatcc
cccgcaaccactgccactaacgctccaccacccccgcctcagagaaacacttcctacctc
aaaacccaggtcgtctcccctgacgccttgtacactgccaagtttgtctcgtacaatgac
gaggaggatgaggacactacaggcctagcaggtcaggttaagctctcctccaccaggaag
tcctatggcgacctcccgcccgcgcacaagccgcagccgcctgcgcgcaagccccgtcct
atgtctgatgggatctttctgtccagctcattccagccgccggctgtcaatgccaacagt
actgcagggcagccccctccccctcccatcaaacccagcctcagcttcatcccgacaggc
aactttaaaggatttaattcatacactggaaacacaaccggggttgtaggattaggagaa
gtttacaaggacccgcgagagaagtggacgaaaggtggtcaagaacaggaaaacacttta
actgaaggagccccggagagtatgacattcaaggagcgccagcggcttttttcccaaggg
aaggaagtatccaacaaagtcaaggcctcgcgaaaactcatggagctggaaaatgaactc
aatacaaagcagtag

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