Oncorhynchus keta (chum salmon): 118397872
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Entry
118397872 CDS
T09424
Name
(RefSeq) afadin-like isoform X1
KO
K05702
afadin
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04517
IgSF CAM signaling
oke04520
Adherens junction
oke04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118397872
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118397872
04530 Tight junction
118397872
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
RA_3
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
118397872
NCBI-ProteinID:
XP_052326945
LinkDB
All DBs
Position
19:63676513..63818679
Genome browser
AA seq
1944 aa
AA seq
DB search
MSGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERKLDLDEKPLVVQLNWNKD
DREGRFVLKNENDIIPKKAQSNGPEREKEGVMQNFKRTLSKKEKKKEKKREKEAHISDGD
EQALSREDGENSRLAAEVYKDMPENSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRP
DSGGTLRIYADSLKPNIPYKTILLSTTDMADFAVVEALEKYGLEKENPREYCIARHTDDK
SGKEIILDDTECPLQIFRDWPNDRGDLVFQLKKRPPDYVPKKGRKPEDKGPRGKGMDVPL
HGSLPPEKLPYLVELSPGRGNHYGYYTYRHHEDGSDSRDKPKLYRLQHSVTEVGSDTTDD
GSIQLFGPGILPHHCKLMHTEGLVTVTPHSLEAETYVDGQRVTETTVLRSGATLQFGASH
VFKFVDPSYDHSMGKGGPGPMMRGRHKSGSVPETTFDLQGDLHSGTALSTSKSSGKLEME
RPSNGSERGMVKPMIRGEQQDSRSQDSLSPEVTLPASIEFRDNSEDTFLTAIINYTNSST
VHFKLSPTYVLYMTCRYVMSSHYRPDIGPSERTHKVIAIVNKMVSMMEGVIQEIPEADQK
QKNIAGALAFWMANASELLNFIKQDKDLSRITLDAQDVLAHLVQMAFKYLVQCLQSDLSN
YMPAFLDDPEEQNPQRPKIEDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFN
KLVMEADSGLCSHYWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSM
QDVQNIHNTCFKLNSLQLNALMTNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGRE
VQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGFQEFLDPLCQRGFCRLTPHPRSPGTWTIH
FEGVDCDSHFSADNSDLQMRKEPEVVTVTLKKHNGMGLSIVAAKGAGQDKLGIYIKSVVK
GGAADMDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATL
LNQPSPMMPRASQGGRDKNGKLRPKSEGFELYNNSVQNGSPESPQADWQAYPEPKKMSGE
ERLLKNRADHRSSPNVANQSQSPGGKAVYTRGPGTKITSVSTGNLCVDDEPSPPHPEAYP
IPTQTYPREYFTIPASKSTNRMDSAPGQIYADDRGPHGPMEDHHHNSIAMQRVDHSQEEL
CDLPGGYPPTGLRPEDLVHLHQQQQREADYQRGSGEHWVNHHQVSSSVESSTSSQEHLNY
SSSSSNKTQSNHKSGPGRWKTPGPIAPHPGPVAQATRTDLPPPPPPPVHYQDFELQPDLP
LPPPPSATQQQAAAAAADRKKREEQQRWYEKEKARLEEERERKRREQERKLGQVRNPAVP
VAHNNNNQHGGTLPPPTQHQQMPPPRSPMQQVPHPYLPSQGQQQAQQQQPPRPEKLSTLP
RAGTLPPQGNPMDTVIRELLPQQQPRTIERRDLQYITISKEELSSSDSLSPDPWKRDARE
KLEKQQQLHIVDLLDREIQDLQAKPERTAEESDRLRKLMLEWQFQKRLQESKQSDEEDEE
DDDEDVDTMMIMQRLEAEKRARLQDEERRRKQQLEEIRKREAEDRAKQEEERRWREEERA
RREVDEKRRQEEEYYTRLEEGRRRQHEEAERKLLTPDEPGLYRPPLPRDYQPQPPPPTAS
PATTATNAPPPPPQRNTSYLKTQVVSPDALYTAKFVSYNDEEDEDTTGLAGQVKLSSTRK
SYGDLPPAHKPQPPARKPRPMSDGIFLSSSFQPPAVNANSTAGQPPPPPIKPSLSFIPTG
NFKGFNSYTGNTTGVVGLGEVYKDPREKWTKGGQEQENTLTEGAPESMTFKERQRLFSQG
KEVSNKVKASRKLMELENELNTKQ
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggagcagggaggaggagcggcggaaactagccgatatcattaaccactggaac
gccaaccggcttgacctgttcgagatcagccaacccaccgaggacttggagttccacggt
gtgatgcgtttctacttccaggaccgcgtagcagggaactttgccaccaagtgtatccgc
gtgtcctccacggccaccactcaggatgtcatcgagacgctggccgagaagttccggccc
gacatgaggatgctctcctctcccaaatactccctctacgaggtccatgtcagcggggaa
gaacggaagctggacctggatgagaagccactggttgtgcagctcaactggaacaaagac
gaccgcgagggacgtttcgtcctcaagaatgagaacgacatcatccccaagaaggcgcag
agcaacgggccggagagggagaaggagggggtaatgcagaacttcaaacggacactgtcc
aagaaagagaagaagaaggagaagaagcgagagaaggaggctcacatttctgacggagat
gagcaagcactgagcagagaagatggtgagaactccagactggcggcggaggtgtacaag
gacatgccggagaacagcttcacccggaccatctccaaccctgaggtggtgatgaagagg
aggcggcagcagaaactggagaagaggatgcaggagttccgcagtagcgacggcaggcca
gactctggggggacgttgaggatctatgcagacagtctgaaacccaatatcccctataag
accatcttgctgtccacgacagacatggcagactttgctgtggtggaggctctggagaag
tacggcctggagaaagagaacccccgggagtactgcatcgccaggcacacagatgacaag
tctgggaaggagatcatcctggatgatacagagtgtcctcttcagatcttcagagactgg
cccaacgacagaggagacctagtattccagctgaagaagagacctccagactacgtgcca
aagaagggccgcaagccagaggacaagggccccagggggaagggcatggacgtgcccctg
catgggtctctacccccagagaaactgccttacctggtggagctcagcccagggaggggg
aatcactatggctactacacctatcggcaccacgaagacggctcagactccagggacaaa
ccgaaactctaccgcctgcagcacagtgttactgaggtgggctcagacactacagacgac
ggctccatccagctgtttggtccaggtatcctgccccaccactgtaaactgatgcatacg
gagggtttggtgacagtgacaccacacagtctggaggctgagacttacgtggacggccag
cgtgtcaccgagaccaccgtgctgcgaagcggagccacactgcagttcggcgcctcccac
gtgttcaagtttgtggaccccagctacgaccacagcatgggcaagggagggcccggacca
atgatgagaggcaggcacaagtcaggaagtgttcctgagacgacctttgacctgcaaggg
gacctccacagtgggacggccctctccaccagcaagagctcagggaagctggaaatggag
cgtccatccaacggcagcgagagaggcatggtcaaacccatgatccgcggggagcagcag
gacagcaggtcccaggacagcctgagcccagaagtaacgttgccggccagcatcgagttc
agggacaactccgaagataccttcctgacggccatcatcaactacaccaacagctccacg
gtgcacttcaagctgtcccccacctacgtgttgtacatgacctgtcgctacgtcatgtcc
agtcactaccggcccgacatcggcccctcggagcgcacccacaaagtcatagccatcgtc
aacaagatggtgagcatgatggaaggagtcatccaggagattcctgaagcggaccagaag
cagaagaacattgcgggggccctggctttctggatggccaatgcctcagagctgctcaac
ttcatcaagcaggacaaggatctgtcgcgcatcacactggatgcccaggatgtgctggca
cacctcgtccagatggccttcaagtacctggtccagtgtctgcagtctgacctgagtaac
tacatgcctgccttcctggatgacccagaggaacagaaccctcaaaggcccaaaatagag
gatgttttgcacaccctgacgggcgccatgtcgctgctgcgtcgttgccgtgtcaacgcg
gcactgaccatccagctgttctcccagctcttccacttcatcaacatgtggctgttcaac
aagctggtgatggaggccgactctggactgtgttcacactactggggcgccatcctccgc
cagcagctcagccacatcgaggcctgggcagagaaacagggcctggagctggctgctgac
tgccacctcagtcgcatcgtacaggctacgactctcctcaccatggacaagtactccatg
caagacgtgcagaacatccacaacacctgcttcaagctgaactccctgcagctcaacgcc
ctcatgaccaactaccactgtgctcccgacgagccttacatcccccctgaacttatagac
cacgtggttgccgtggcggagaacacagcagatgagctggctcgtagcgatggccgagag
gtccagctagaggaggaccctgacctgcagctgcccttcctgctgcccgaggacggctac
tcctgcgacgttgtgaggaacattcccaacggattccaggagttcctggaccccctttgt
cagagaggattctgtcggctaacccctcacccgcgctcccctgggacctggaccatccac
tttgaaggagtcgactgcgacagccacttctctgcagacaactcagacctgcaaatgcgg
aaggaaccggaagttgtgacggtcaccctgaagaagcacaatggcatgggcctcagcatt
gtggctgccaagggtgctgggcaggacaagctcgggatctacatcaagtctgttgtgaag
ggaggcgcggctgacatggacgggcgtctggctgcaggggaccagctgctgagtgtggac
ggccgcagcctggtgggcctctcccaggagagggctgcggagttgatgacgaggacaggc
tctgtggtgacactggaggtggccaaacagggagccatctaccacggcctggccacgctc
ctcaaccagccttctcctatgatgcccagagcgtcgcaaggagggcgtgacaagaatggt
aaactgagaccaaagagcgaaggctttgaactgtacaacaactctgtccagaacggctct
ccagagagcccccaggccgactggcaggcctacccagaaccaaagaagatgagcggggag
gagaggctactgaagaaccgggccgaccaccgctccagccccaacgtggccaaccagagc
cagagtccgggagggaaggccgtctacacacgaggacctgggaccaagatcacctctgtc
tccacgggcaacctgtgtgttgacgacgagccctctcctccccatccggaggcctatcct
attcccactcagacctaccccagggaatacttcaccatcccagcctccaagtctacgaac
cggatggactctgccccaggacagatatacgctgacgacaggggtcctcacggccccatg
gaagaccaccaccacaacagcatagctatgcagcgggtggaccactctcaggaggagctg
tgtgacctcccagggggctaccctccaaccggcctgcgtcctgaggacttggtccacctg
caccagcagcagcagagagaggctgactaccagcggggcagtggagaacactgggtcaac
caccaccaggtctcctcctctgtggagtcctccacctccagccaggagcacctcaactac
tcctcgtcctcctccaacaagacccagagcaaccacaagagtgggccgggacgctggaag
acccccggccccatcgctccccacccaggccccgtggcccaggccacacgcacggacctc
cctccaccgccccctccccctgtacactaccaggactttgagctccagcccgacctgccc
ctgccccctcctccctcggccacccagcagcaggccgcagccgccgccgccgaccgcaag
aagcgcgaggagcagcagcgctggtatgagaaggagaaggcccggttagaggaggagagg
gagaggaagaggagggagcaggagaggaagctgggacaggtccgtaacccagctgtgcct
gtagcccacaacaacaacaaccaacacgggggcacactcccccctcccacacagcaccag
cagatgccccctccccggtcccccatgcagcaggtgccccatccctacctcccctcccag
ggccaacagcaggcccagcagcagcagccccccaggccagagaaactgtccaccctgccc
agagcgggcaccctgccccctcagggtaacccaatggacacagtgatcagagagctgctc
ccccagcagcagccccgcaccatcgagcgccgggacctacagtacatcaccatcagcaag
gaggagctgtcttccagcgacagcctgtccccagacccctggaagagagacgcccgggag
aagctggagaagcagcagcagctgcacatcgtagacctgctggacagggagatccaggac
ctgcaggccaagccggagcgtacggctgaggagagtgaccggctcaggaagctgatgctg
gagtggcagttccagaagagactgcaggagtccaagcagagtgatgaggaagatgaggag
gatgacgacgaggacgtggacaccatgatgatcatgcagcggctggaggcagagaagaga
gcaaggttgcaggacgaggagcggcggaggaagcaacagctggaggagatccgtaagcgc
gaagcggaggaccgggccaaacaggaggaggagagacgctggagagaggaggagagggcc
agacgagaggtcgatgagaagaggaggcaggaggaggagtactacacacgtctggaggaa
gggcggcgccggcagcacgaggaggccgagcgcaagctgctgacgcctgacgagcctggt
ctgtacagacctcccctccccagggactaccagcctcagcccccccctcccactgcatcc
cccgcaaccactgccactaacgctccaccacccccgcctcagagaaacacttcctacctc
aaaacccaggtcgtctcccctgacgccttgtacactgccaagtttgtctcgtacaatgac
gaggaggatgaggacactacaggcctagcaggtcaggttaagctctcctccaccaggaag
tcctatggcgacctcccgcccgcgcacaagccgcagccgcctgcgcgcaagccccgtcct
atgtctgatgggatctttctgtccagctcattccagccgccggctgtcaatgccaacagt
actgcagggcagccccctccccctcccatcaaacccagcctcagcttcatcccgacaggc
aactttaaaggatttaattcatacactggaaacacaaccggggttgtaggattaggagaa
gtttacaaggacccgcgagagaagtggacgaaaggtggtcaagaacaggaaaacacttta
actgaaggagccccggagagtatgacattcaaggagcgccagcggcttttttcccaaggg
aaggaagtatccaacaaagtcaaggcctcgcgaaaactcatggagctggaaaatgaactc
aatacaaagcagtag
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integrated database retrieval system