Oncorhynchus keta (chum salmon): 118397878
Help
Entry
118397878 CDS
T09424
Name
(RefSeq) DNA polymerase zeta catalytic subunit-like isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
118397878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oke03400
]
118397878
Enzymes [BR:
oke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
118397878
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
118397878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
118397878
NCBI-ProteinID:
XP_052327072
LinkDB
All DBs
Position
19:complement(66846571..66957543)
Genome browser
AA seq
2991 aa
AA seq
DB search
MFAVRIVTADYYLTSPLKDLDVIYNQFRESDVKKVPVVRIFGATPIGQKTCLHLHGVFPY
LYVPYDGYGQQAESYLRQVAVSIDRALNVSMGNPSTNTQHVFKVALVSGMPFYGYHAKEK
TFMKIYLYNPQMVKRVCELLQGGAVMNKSYQPHEAHIPYLLQLFIDYNLYGMNMVNLGAV
KFRRSQQREEGSPPDHQGFCSRPLKSPCTSKLSDSTLGGTFVHWQEDATPCSLVLEDVEK
QSTCELEADAVAADILNRLEIDNQIGRNPGLQVIWEDEKQRRREKNQSSQVETPQSQDRR
FVASTESERIFMKRFKEILKENEFDVRTQSGSVEGAAEEQDPFPAERPVYPGVLTPEVLH
CTPDNQVEVHRDSQTDTKRNCGKDQGEAIVDEEAILSLLESSQTFLSQRSSHSSLLDGSQ
NHAMVDLLAGLEDDGYREAHMRQNSQHSLPGGGSVHYNSDEEEEGPEREREEAELSLMMS
QRWDSNLPEQSSRQRPGVKDAEESFSDEPQESSDEEMERRGDNSLSANLSISQLDGAADE
NSDSLLTDKSSRTHSSLTVTDTILGKRNPFPGETVHLEPLSSTKVLLECKHPEHRQAHSQ
DAEEPANKHFLGQDSHECSTVFKVNKERPYIQPVKHPIPCNIANQAEVSQICVDKMDVVR
PLYTYEKKTMALEESDLDVFPFSNGKITQSRKKYSSMKNVEKNRLSILQNHRSFSLCYSE
LRNCPSTTDLELGQKGCKSPILRNSITPTPCPIEEDELLAPLEGGMGQDSEDGDMGELKI
RYEDYQENKTERTIVAQQEAHYKFFPSVILSNCLTRPAKKVVGNKLTDGCAKLEQSETRR
SRLKLGKRSLAAAAQKANAYAGETPASDTQVSTAFMAITPTCPKSTNAEEKPVTVAKSVV
VGTGPTEPLPESPALAPTPLPAPIASPAPAPVPAILNVASVECRLAPLLELPAKVTCTKA
SGLPGSKYTLRAKRKMSYDSSEDGEQSVSSRMKHPLALRDRFKENYVLSKQELKYQKRQK
MYRKEPREPPIIIKYIIINRFKGQKNMLVKMAKVSAKEQRVVLTPDRVETYTKMSPIKTF
WPKVPQSCAVKFPLSEPKASKKQPKRKAKVNTTTKKTVNSPPRVRVRQGGERPRRTRGLR
KTLTPSLPWPWPCYCELADDHVTEYTDVMVELGYLSERSLSPVDSTPPRCWSPSDPLMEA
ISSDRLVNRLNDPCLTSVCQEPPPESLGRGVRNRSRTAKPRNVTSTSPRRRIKLSEEVKK
ESTARRKSTIGTPRRRKKVLETVDGTSVGGVCTTTITTRTRRPRGKKQAEGPEQPPVRSR
DCDSSQHLFPEGELPSTESSSEDIPPFQKPASKTSQIIDGSKSLTQFSQSIEPKSEDCES
SIMEVNQSFAFEFVQIRPDTTADECTSQQVKSPTQVEDRKGTPKAESPHSGLRNGKTLPE
DISGLAVLKKLQQRGGQCLSTTTQPPGSTPDPAAAKPSRARRAPSATPWKPRAPRTTTAK
EGKPRSRKEKVNSQPEVPVKQKPPMSDDSPVFLSDPGLDSCYSIEDSLSPELPHNYNFDI
NAIGIGSQAEFSSLYMGSQFVLTDKNLPQKFLSDITQEAVPALALSLETRPEVLFGSGEE
LQESLSGPLTPELFDKTKNCKFVSNHRSPLDSERLPRSREWGTSLGKLHGLSHFQGFHCE
RKELLFSAFDPILPLPLSSASFADNEGLQTGDLLEGNYAFTSTTPCSSPRSFSSLSQVKV
ISQLLRGTGGGAHILKPLMSPPSREEILTTLLDLEMSEVTFQEPFCSNPSDAPGKPREVG
GRKLMVETKLAKELAEFNGDLCLEGLQFWKTAFSTMTRAGSSHTLGAEDTRDQAQLSPSS
AGDQKVILLPCRSAPRRERVQLWLEARKQYEHLQRGRRDMGELERGRLEQVREEQQTDRT
EQPAPFHCSALEDEEEFEKLSGIRTRRERRNDLSLQISPVGGVETQDIPRVVKPVPDINI
RDSEEYFGKSISPHLLPWQEPTQHSPSGPDAVEGERRGSDRGLPLSPRLCTSPERREEKH
FLCPSPFSSMKPRGDGECTSPQLHSTPVLRRHTGRHESETVCSTPVTEDAESTSQRLQHR
RGEHTDTLRRVLLTTQRKNQFAALNAPKKDNSQIEGPSISNSYGFKVSLQNLQDAKALHE
VQHLTLMSMELHVRTRRDLEPDPEFDPICALFYCFSSDAPFPDSDKTQLTGAIVVDKDCQ
ESGQGVRGTAPLLVRSGVSGLKVTYAVNEKQMFQEVVTVIRRFDPDILVGYEVQMRSWGY
LLQRASALSVDLCQQLSRVPGNAKENHFAAERDEYRADTMTEIHIIGRIVIDLWRIMKTE
VTLNNYSFENVAFHVLHQRFPLYSPRSLSDWFDHNTDLYRWKVVDHYVSRVGGTMQLLQQ
HDIIGRTSELARVFGIQFYHVLTRGSQYRVESMMLRVAKPMNYIPVTPSIQQRAQQRAPQ
CIPLVMEPESRFYSNSVVVLDFQSLYPSIAIAYNYCYSTCLGHVESMGTADEFKFGCTSL
RVPPELLYQLRNDITVSPNGIAFVQPTVRKGVLPSMLEEILNTRFMVKRSMKTYKQDKTL
MRLLDARQLGLKLIANGCAAANCSGRMPSVEVGDSIVHKARETLERAIKLVNDTKKWGAH
VVYGDTDSMFVLLKGATKEQAFMIGNEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYM
GYMYESLDQKDPVFHAKGIETVHRDGCPAVSKILERSIKLLFETRDISLVKQFVQRQCGK
VLETKASMQDLTFTKEYRGSGSYRPGACVPALELTRRMMAYDRRLEPRAGERVPYVIVYG
RPGVPLIQLVRRPLEVLQDPSLRLNATYYITKQILPPLQRIFQLIGVDVLSWYLEIPRVQ
KASCSTVAERKGTISQYFTTLHCPVCDELTQLGVCTSCRGEPQRVAITLHQDMRLWESQQ
DQLLQICRNCSGSVERQVLCVSLDCPVLYKLSRVNRQLSKVPYLRQLLEQF
NT seq
8976 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccgtccgtatcgtcaccgctgactactaccttacaagtcctctcaaagacttg
gacgtcatttataaccaattcagagaaagtgacgtgaagaaagtaccagtggttcggatt
ttcggggcaactccaataggtcagaagacctgtctccacctccatggcgtcttcccctac
ctctatgtgccgtacgatggctatgggcagcaggcggagagctacctgcgtcaggtggcc
gtcagcatcgacagggccctcaacgtgtccatgggaaacccctccaccaacacgcagcac
gtcttcaaggtggcactggtctccggcatgcctttttatggataccatgccaaagagaag
acgtttatgaagatctatctgtacaatcctcagatggtcaaaagggtgtgtgagctgtta
caaggaggtgctgtgatgaacaagagctaccagccccacgaggcccacattccttacctg
ctgcagctattcatcgactacaacctgtacggcatgaacatggtcaacctgggagccgtc
aagttccgccggagccagcagcgcgaagaggggtctcccccagatcaccagggcttctgc
agcagacccttgaagagcccctgtacctccaaactgagtgacagtaccctgggaggcaca
tttgtccactggcaggaggatgccacaccctgttctctagtcctggaggatgtggagaaa
cagagtacgtgtgagctggaggcagatgctgtggctgcagacatcctcaaccgtctggag
atagacaatcagattggcaggaaccctggcctgcaggtcatctgggaggacgagaagcag
agacgacgagaaaagaaccagtcatctcaggtcgagaccccacagtcacaggatcgcagg
tttgtcgcctcgacggagagcgagagaatcttcatgaagagattcaaggagatcctgaag
gaaaatgagtttgatgttaggactcagtctgggtctgtggagggcgcggcagaggagcag
gatcccttcccagctgaacggcctgtataccctggtgtcctgaccccagaggtgctgcat
tgtacaccagataaccaggtggaggttcacagagactctcagacagacactaaaaggaac
tgtggtaaagaccagggggaggccattgtggatgaggaggccattctgagtctgttggaa
agcagccagaccttcctctcccagagatccagccactcctccttactagatggcagccag
aaccatgccatggtggacctgctggcaggcctggaggatgatgggtacagagaagcccat
atgaggcagaactcccagcattctctgcctgggggagggagcgttcactacaacagtgac
gaggaggaggaggggccagagcgagagagggaggaggcagaactcagtctgatgatgtca
cagagatgggacagcaaccttccagaacagtcttctagacagagacctggtgtgaaggat
gcagaggagagcttcagtgacgagccccaggaatcctccgatgaggagatggaaaggagg
ggggacaactctctctctgccaatctgtccatttctcagctggacggcgctgcggacgag
aacagtgattcattgttaacggacaaaagctccaggacacactcgtccctcactgtcaca
gacacgatcctggggaagaggaacccctttcctggggagactgtccacctggaacccctg
tcctccaccaaggtcctcctggagtgcaaacaccctgaacataggcaggcccactcacag
gacgcagaggaaccagccaataagcacttcctcggccaggacagccacgagtgctccacg
gtgttcaaggtgaataaagagagaccttacatccagccggtcaaacaccccatcccctgc
aatatcgccaaccaggctgaggtttctcagatctgtgtggacaaaatggacgttgttcgg
cctctgtacacctacgagaagaagacgatggccctggaggagtcagacctggacgtcttt
ccgttcagcaacgggaagatcacccagagcaggaagaagtacagcagtatgaagaacgtg
gagaagaatcgtctgtccatcctgcagaaccacaggagcttctccctgtgttactctgag
ctgaggaactgccccagcacgacagatctagagctgggtcagaaaggctgtaaaagccca
atcctgagaaacagtataaccccaactccatgccccatagaagaggacgagctcctggcc
ccgctggagggcggcatgggccaggacagcgaggacggcgacatgggtgagctgaagatc
cggtacgaggactatcaggagaacaagactgagaggaccatagtagcccagcaggaggca
cactataagtttttccccagtgttattctctccaactgcctaaccaggccagctaagaag
gtagtgggcaacaagctgacagatggctgtgctaagctagagcagtcagagacacgcagg
tccaggctgaagcttggcaagaggtctttggctgctgcagcccagaaggctaatgcgtac
gctggggaaaccccagcctctgacacccaagtcagcacagcctttatggccatcacgcct
acttgtccaaagagcacgaacgccgaggagaagccagtcacagtggcaaagtcagtcgta
gtggggactggacccacagaaccactgccagaatcccctgccctggcacctacccctcta
ccagcccctattgcttcccctgcaccggccccagtccctgccattctgaatgtggcgtct
gtggagtgcaggttggccccactgcttgagctccccgctaaagtaacctgcaccaaagcc
tcaggtctgcctggcagcaagtacaccttgagggccaaacgcaagatgagctacgacagc
agcgaggatggggaacagtcggtatcctctcgcatgaaacaccctctggccctccgagac
cgcttcaaagaaaactacgtcctcagcaagcaggaactaaagtaccagaaaagacagaag
atgtacagaaaggagccaagggagccgcccatcatcatcaaatatataatcatcaaccgg
ttcaaaggtcaaaagaacatgttggtgaagatggccaaggtgagtgctaaggagcagcgg
gtggtgctgacacctgacagagtggagacgtacacaaaaatgtcccccatcaagaccttc
tggcctaaggttccacagtcttgtgcggtcaaattccctctcagtgagcccaaggctagt
aagaaacagcccaaacgaaaggccaaggtcaacaccaccactaagaaaacggtcaacagc
ccacccagagtccgagttaggcaagggggtgagaggcctagaaggactagaggccttaga
aaaaccttgactccctctctgccatggccctggccatgttactgtgaactggccgatgac
cacgtcactgagtacactgatgtgatggtggagttgggttatctatctgagagatccctt
agccctgttgattcaaccccaccccggtgttggtcccccagtgacccccttatggaagcc
ataagttctgatcggttggtgaaccgattaaatgatccctgtctcacctctgtttgtcag
gaaccccccccagagtcgttaggccgaggcgtgcggaaccgcagccggactgctaaacct
agaaatgtaacctctaccagcccaagaagacggattaagctttcagaggaagtcaaaaag
gagagcacagcgagaaggaaaagtactattgggactccaaggaggagaaagaaagttcta
gaaacagttgatggaactagtgtgggtggtgtttgtactactaccatcaccacaagaacg
aggaggcctcgggggaagaagcaggcagaagggcctgaacagccccctgtaagaagcaga
gactgtgacagttcccagcacctcttcccagagggtgagctgccttctactgaatcctcc
tcagaggacataccaccctttcagaagccagcaagcaaaaccagccaaatcattgacggc
tctaaatccctaacccagttctcgcagtctattgaaccaaagtctgaggactgtgaaagc
tccatcatggaggtgaaccaaagctttgcttttgaattcgtccaaattcgtccagacact
actgctgatgaatgcacttcccaacaggttaaatccccaacccaggtggaggacagaaag
ggcacccccaaagcagagtcccctcactcaggccttcggaatgggaagaccttacctgag
gacatctctggcctggctgttctgaaaaagctccagcagagaggtgggcagtgcctttcc
actacaacacagccccctggctccacaccagaccctgctgcagccaagccatcaagagcc
aggagggctccctcagccaccccatggaaaccccgggccccaagaactacaactgccaag
gaggggaaacccagaagcaggaaggagaaggtgaactctcagccagaggtacctgtcaag
caaaagccccccatgtcagatgacagtccagtgttcctgtcagacccaggcctggacagc
tgttactccatagaggacagcctgtccccagagctcccacacaactacaactttgacatc
aacgccatcggtatcggtagccaggcagagttctccagcctgtacatgggcagccagttt
gttctgaccgacaagaacctgcctcagaagttcctgagtgacatcacacaggaggcggta
cctgccttggcgctgagcttagagacgaggcccgaggtgctgtttggctcaggggaggag
ctccaagaaagcttgtccggacctctgactcctgaactctttgacaagacaaaaaattgc
aaatttgtgtccaatcatcgatcacctctggactctgagaggttaccaaggagcagagag
tggggaacgtctctgggcaaactccacggcctcagccacttccagggctttcactgtgag
aggaaagagctgctgttctctgcctttgaccccatcttaccactgcctttgagctctgcg
tctttcgcagacaacgaagggttgcagactggagacctactggaggggaattatgctttt
acatcgaccacgccctgtagttcgccacgctcctttagctcgctatcccaggtgaaggtc
atcagccagctcctcagagggacaggggggggggcccacatcctcaagcccctcatgtcc
cctcccagtcgggaagagatcctcaccaccctcctggacctggagatgtctgaggtcaca
ttccaggagcccttctgcagcaacccctcagacgccccagggaaacccagggaggttggt
gggcgtaagctgatggtggagaccaagttggccaaggagctggctgagttcaacggggac
ctgtgcctggaggggctacagttctggaagacagccttctctaccatgacccgggccggc
tcatctcacacactgggagcagaggacaccagagaccaggcccagctcagcccctcttca
gccggggaccagaaggtcatcctgctgccctgtaggagcgcccccaggcgggaacgcgtc
cagctatggctggaggccagaaaacagtatgagcatctgcagaggggcaggagagacatg
ggagaactggagaggggaaggttggaacaggtaagagaagagcagcaaacagacaggact
gaacagcccgctccgttccattgttcagcattggaagacgaggaggagtttgagaagctc
tcaggtatcaggactcggagggagaggaggaatgatctgtccctacagatatcacctgtt
ggaggggtggaaactcaggacattcccagagtagtgaagcctgtaccggacattaacatc
agagactctgaggagtactttggtaaatccatctctccacacctgctgccatggcaggag
cccacgcagcacagtccctcaggaccagacgcagtagagggagagaggagagggtcagat
cgagggttacccctgtcccccaggctctgcacctctccagagaggagggaggagaagcac
ttcctctgtccctctcccttctcttccatgaagcccaggggggacggggagtgtaccagc
ccccagctccacagcaccccagtccttaggcgacacacaggcaggcatgagtcggagact
gtgtgcagcacccctgtgactgaagacgcagagtccacgtctcagagactgcagcacagg
agaggggaacacacagacaccctaaggagagtgctactgaccacacagaggaagaaccag
tttgctgctttgaacgctccaaagaaagacaactctcagatcgagggccccagcatcagc
aattcatacggattcaaagtcagcttgcagaacctccaggacgctaaagccctgcatgag
gtgcagcacctgacgttgatgagcatggagcttcacgtgcggacccggcgggacctggaa
cccgaccccgagtttgaccccatatgtgccttattctactgcttcagctctgacgcacct
tttcctgactcagacaagacccagctgactggggccatcgtggtagacaaggactgccag
gagagtggccaaggtgtcagaggaacagcacccctgctggtaagatcaggtgtctcagga
ctgaaggtcacctacgctgtgaatgagaagcagatgttccaggaagttgtcactgtcata
agaaggtttgacccagacatcctggtgggctacgaggtccagatgcgttcctggggctac
ctcctccagcgggcatcagcactcagtgtggacctgtgccagcagctttcccgggtacca
ggtaacgccaaagagaaccatttcgcagcagagagagacgagtatagagcagacaccatg
acagagatacacatcatcggacgtatcgtcatcgacctgtggagaattatgaagactgag
gtgacattgaacaactacagttttgagaatgtggccttccacgtcctgcaccagcgcttc
cccctgtacagcccccgctccctgtcagactggttcgaccacaacactgacctgtacagg
tggaaggtggtggaccactatgttagccgggtgggcggtaccatgcagcttctccagcaa
catgacatcatcggcaggaccagcgagctggccagggtgtttgggatccagttctatcac
gtgctcaccaggggatcccagtaccgtgtggagtccatgatgctgcgtgtggccaagccc
atgaactacatccctgttacgcccagcatacaacagagagcccagcagagggcgccacag
tgcatcccgctggtcatggagcctgagtcgcgcttctacagcaactctgtggtggtgctg
gacttccagtcgctctacccctccatcgccatcgcctacaactactgctactctacctgc
ctgggccacgtggagagtatgggaacggccgatgagtttaagtttggctgcacctccctg
agggttccccctgagctcctctatcaactccgcaatgacatcaccgtctctcccaacggc
atcgcctttgtccagcccacggtgaggaagggggtcctgcccagcatgttggaggagata
ctgaatacgcggttcatggtgaagcgttccatgaagacctacaaacaggataagaccttg
atgaggctgctggacgccaggcagctgggactcaagctcatcgccaacggctgtgccgcc
gccaactgctctggacgcatgcccagcgtagaggttggtgacagtattgtccacaaggcc
agggagaccctggagagagccatcaagctggtcaacgacaccaagaaatggggagcccac
gttgtgtacggggacacagacagcatgtttgtcctgctaaagggagcaactaaagagcag
gccttcatgatcggcaacgagatcgcagaggcagtgactgctaccaaccctaaacctgtc
aagctgaagtttgagaaggtgtacctgccgtgcgtgctccagacaaagaagcgctacatg
ggctacatgtacgagagcctggaccagaaggatcccgtgttccacgccaaggggatcgaa
acagtgcaccgagacggatgccctgctgtttccaagattttggagcgttccatcaagctg
ctgtttgagacgcgggacatcagcctggtgaagcagtttgtgcagcgtcagtgtgggaag
gtgctggagaccaaggccagcatgcaggacctgaccttcactaaggagtacaggggcagc
ggctcctaccggccgggggcctgcgtccctgctctggagctcaccaggcgtatgatggcc
tatgaccggcgcctggagccgcgggcgggcgagagggtgccctacgtgattgtgtacggg
aggccgggtgtgcccctcatccagctggtgcggcggcccctggaggtgctgcaggacccg
agtctgcgcctcaacgccacctactacatcaccaagcagatcctgcccccgctgcagcgc
atcttccagctcatcggcgtggacgtgctcagctggtacctggagatccccagggtccag
aaggcatcgtgctccactgtggctgagaggaagggaaccatctcccagtacttcaccacg
ctgcactgtcctgtgtgtgacgagcttacccagctaggggtgtgtaccagctgccggggc
gagccccaacgcgtggccatcactctccatcaggacatgcggctgtgggagagccagcaa
gatcagctgctacagatctgtaggaactgtagtggcagtgtggagcggcaggttctgtgt
gtgtctctggactgtcctgtgctctacaagctgtcccgggtcaacagacagctctccaag
gtgccctacctccgacagctcctggagcagttctga
DBGET
integrated database retrieval system
