Oncorhynchus keta (chum salmon): 118397938
Help
Entry
118397938 CDS
T09424
Name
(RefSeq) CLIP-associating protein 2-like
KO
K16578
CLIP-associating protein 1/2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118397938
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118397938
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
118397938
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
118397938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
TOR1L1_N
Cnd1
ParcG
Arm
TAN
HEAT_DAAF5
IFRD
Motif
Other DBs
NCBI-GeneID:
118397938
NCBI-ProteinID:
XP_052325416
LinkDB
All DBs
Position
19:complement(11732148..11881385)
Genome browser
AA seq
1530 aa
AA seq
DB search
MEEHDNMDYLYQQVLQKDVTRRLQVGQDLIDYLNDPQRSSDVEQDKPRLDKTIDELTGWV
NASNYKVALLGIDIAGAFVDRLGEHFRGYLGTVVPALVDRLGDSKDQVREQSQNLILRCM
EVTASPMYVWERLLPGFKHKNFRSREGVCLVLCAMLNTYGAQPLRLSKIVPHLCTLTGDQ
NPQVREAATTSLVDVYRHIGERVRADLGKSGLPAARLQTIYGRFDEALNSENMALSPSHD
RSFEDDADSADGNRAQAAFKVPKVPKKSAESSAARRPNTTASKIGGASKDGTGGIDEEDF
IKSFTDVPTVQIYSSRDLEDNLNKIREICSDDKHDWDQRAAAMKKIRSLIVAGATEYECF
YQHLRLLDGAFKLSAKDLRSQVVREACITVAHLSTVLGNKFDHGAEGILPVLFNLIPNCA
KVMATSGASAIRFIIRHTHVPRLIPLITSNCTCKSVAVRRKCFDFLDLLLQEWQTQTLER
HTAVMVASIKKGIADADAEARVEARKAYWGLRNHFPGEADSLFNSLEPSYQKSLQSSLKS
SGSVTSLPQSDRSSSSSQESLNRPLSSKWSAAPGRVPAGHKGGASPGSLQRSRSDVDVNA
AAVAKQRHIGQVGPVRLTPGSYSSLDDASDKTDGRLRTKQPLTTATSVSHVDSRGRSRTK
MVSQSQRSYESDCTPGSQSATIVGAGSRSGSPGRVLTSTALSTLGSGAQRVLAGAGGRRS
RIPRSQGCSRDSSPTRLSVAPSSVSSIYKATSRGARGSRIPRPSMSQGCSRETSRESSRD
TSPVRSFTPLASRHYSRSTGALHTADALGAAGYSISQSSHLSSSVSTMRVLTGSDIEEAL
ADALLLGDITSKKKPARRRYENYGMYSDDDANSDASSACSDRSYSSRNGGVIPTYMRQTE
DVAEVLNRCASANWSERKEGLLGLQALLKNQRTLSRVELKRLCEIFTRMFADPHSKRESG
SKVYGTAESGISSASFKVFSMFLETLVDFVLVHREDLQDWLFILLTQLLKKMGADLLGSV
QAKVQRALDITRESFPNDLQFTILMRFTVDQTQTPNLKVKVAVLKYIETLTLQMEPQDFV
NSSETRLAVSRIITWTTEPKSSDVRKAAQSVLISLFQLNTPEFTMLLAALPKTFQDGATK
LLQNHLRNTGNTAQAPRGSPMTRHTPPSPASWSSPLTSPTNTSQNTSTLGAFDYDTENMN
SDDIYSSLRGVTEAIQNFSVRSQEDMNETGGGADQVDGVRTALDNKTSLLNTPLLSSSPR
GSRDTFTDSPFKYNVKDTSLDESDQQTDDSSIDQSELVTELLKELSNHNERVEERKVALC
DLLKLIRENTLQVCWDEHFKTILLLLLETLGDREHVIRALALRVLREILSRQPWRFKNYA
ELTIMKALEAHRDPHKEVARAAEETAAMLASSISPDQCVKVLSPIIQSADYPINLAAIKM
QTRVIERVPHHGLVTMLPEIVPGLIQGYDNAESSVRKACVFCLVALYAVIGEELKPHLNQ
LSGSKLKLLNLYIKRAQSGSSGGEPPPDSL
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacatgacaacatggactatttatatcagcaggtcctgcagaaagacgttacc
cgcaggttgcaggtcgggcaggatttaatagactacctgaacgacccgcagaggtcctcc
gatgtggaacaagacaaaccccggctggataaaaccatagatgagctgacgggatgggtc
aacgccagcaactacaaggtggcgttgttggggatagacattgccggggcgttcgtcgat
cgcctgggggaacactttagaggatacctgggaacagtggtcccagccctcgtggaccgg
ttgggggacagtaaggaccaggtcagagaacagagtcagaatcttatcctgcgctgtatg
gaagtgaccgcgtcgcctatgtatgtgtgggagaggttgcttcctggttttaaacataag
aacttccgcagcagagagggggtgtgtctggttctctgcgccatgctcaacacgtatggt
gctcagccgttgcgtctcagtaagatcgttccccacctctgcactctgactggagaccag
aacccacaggtccgtgaggctgccacaacatctctggtggatgtgtatcgccacataggg
gagagagtcagagccgacctgggaaagagtggcctgcctgccgcacggttacagacaata
tatgggcgttttgacgaagctttgaattctgagaacatggcgctcagccccagtcacgac
cgtagttttgaggatgatgcagacagtgcagatgggaaccgtgctcaggctgccttcaag
gtccccaaggtccccaagaagtcggcagagtcctctgctgcacgaagacccaacactacg
gcttccaagatcggaggtgcgtctaaggatggaaccgggggcatcgatgaagaagacttc
atcaaatctttcactgacgtccccacagtacagatctactcatctcgtgacctggaggat
aacctgaataagatcagagagatctgttctgatgacaaacatgactgggaccagagagcc
gctgcaatgaagaagatccgctcgctgattgttgccggggcaacggagtacgagtgtttc
taccaacacctgaggctgttggacggagcgttcaaactgtcagctaaagacctccgatca
caggtggtacgagaggcctgcatcactgtggctcacctgtcgacagtgttgggtaataag
tttgaccatggtgctgagggaattcttcctgtcctgttcaacctcatccctaactgtgcc
aaggttatggccacttcaggggcgtctgctatacgcttcatcatacggcacacacacgtt
cccagactcatccccctgatcaccagtaactgcacctgcaagtctgtggccgtcagacgg
aaatgttttgacttcttggacctgcttctacaggagtggcagacccagactctggagaga
cacacagcagtgatggtcgccagcattaagaagggaatcgcagatgccgacgcagaggcc
agggtggaggcccgcaaggcatactggggtcttaggaaccatttcccgggggaggcagac
tctctgttcaactcgttagaaccgtcctatcagaagagcctccaatcgtctctcaagagt
tctgggagcgtgacgtctcttcctcagagcgaccgctcctcttcctcatcacaggagagc
cttaatcgtcctctgtcatctaaatggtcagctgctcctggaagagtcccggcgggtcat
aagggcggggcgtcgccgggctccctacaacgttcccgtagcgatgtagatgttaatgcg
gcagcggttgctaagcagcggcacatcgggcaggtggggccagtgagactgacccccggc
tcctactcctcattggatgatgcctcagataaaacagatggtcgtctgaggaccaagcag
cctctcaccacggcaaccagtgtcagccacgtggactcccggggacgaagccgcaccaag
atggtgtcccagtcacaacgttcctacgaatcagattgcacaccaggatctcagtctgct
accatcgttggtgccggcagtcggagtggttccccgggtcgcgtcctgaccagcaccgct
ctgagtacgctgggttctggagcccagagggtcctagctggggccggagggagacgtagc
cgcatcccccgcagccagggctgctcacgagactcctcccctacacgcctgtctgtcgct
ccctccagtgttagttccatctacaaagcaacgagcagaggagctcggggcagtcgtatt
cctcggcccagtatgagtcagggctgcagtagggagaccagcagagagagcagcagagat
accagccctgtgcgttcctttacacctctggcatcgcgccactactctcgctccaccgga
gctctccacaccgccgacgctttaggggccgcagggtacagtatcagtcaatccagccat
ctgtcatcgtcagtcagcaccatgagagtcctcactgggtctgatatagaggaggccctc
gctgacgccctgctgttgggagacataacatccaagaagaagccagcgcggcgtcgctat
gagaactatgggatgtattcggatgatgatgctaacagtgacgcgtccagcgcctgctca
gaccgctcctacagctccaggaacggaggagtcatccctacgtacatgagacagactgaa
gacgtggccgaggtgttgaaccgctgtgccagtgccaactggtcggagaggaaggagggg
cttctgggtctacaggctctactgaagaatcaacgcaccctcagtcgtgtggaactgaag
aggttatgtgagattttcacccggatgtttgcagacccccacagtaagcgagaatccgga
tctaaggtctatggaacggcagaatccggtataagctcagcctccttcaaggtgttcagt
atgttcttggagaccctagtggactttgtcctggtgcacagagaagacctgcaggactgg
ctgttcatcctgctcacccagctgctgaagaagatgggagctgacctgctggggtctgtc
caggccaaggtccagagagcactggacatcacacgagagtctttccccaacgacctccag
ttcactatcctcatgaggttcactgtggaccagactcagacaccaaacctcaaggtgaag
gtggctgttctgaaatacattgagaccttgaccctgcagatggagcctcaggactttgtg
aactccagtgagacgcgcctggctgtgtctcgcatcatcacctggaccacagagcccaag
agctccgacgtcaggaaggcggcccagtcggtactgatctccttgttccagttgaacact
ccagagttcaccatgctgctggcagccctgcccaagaccttccaggatggggccaccaaa
ctgctacagaaccacctgaggaacaccggtaacactgcacaggccccaaggggaagcccc
atgacacgccacacccccccctctcctgccagctggtccagccccctcacctctcctacc
aacacgtcacagaacacatccacactcggtgcgtttgactacgacacagagaacatgaac
tcggacgacatctatagtagtctgagaggtgttacagaggccattcagaacttctccgtc
cgcagtcaggaagacatgaacgaaacgggtggtggtgctgaccaggtggatggagtccgc
actgctctggacaacaagacttctcttctgaacacccctctgctctcctcttctccccgg
ggatcccgagacacctttacagactccccctttaaatacaacgtcaaagatacttcattg
gacgaatcagaccagcaaactgatgacagcagcattgaccaatcagagctggtgactgag
ctgctgaaggagctgtccaatcacaatgagcgtgtggaagagagaaaggtggcgctttgt
gatctcttgaagctgattcgagaaaacaccctgcaggtctgctgggacgaacacttcaaa
accattctcctgttactactggagacgctgggggacagagagcatgtgatcagggcgtta
gctctgcgtgttctgagggagattctgagccgtcagccctggaggttcaagaactacgct
gaactcaccatcatgaaggccctggaggcacacagggacccacacaaagaggtggcgcga
gcggcagaggagacggcggccatgctggcgtcgtccatcagtccagaccagtgtgtcaag
gtgttgtctcccatcatccagtcagctgactaccccatcaacctggctgccatcaagatg
cagaccagagtaatagagagggtcccccaccacggactagtcaccatgctgccggagata
gtccccggactcatacagggttatgacaacgcggagagcagtgtgaggaaggcctgtgta
ttctgtctggtggccctctatgcagtcataggggaggagctaaaacctcacctcaaccaa
ctgtctggcagcaagttgaagttgttgaatctgtacatcaagcgtgcccagtcaggctcc
agtggtggtgagcccccaccagacagcctatag
DBGET
integrated database retrieval system