Oncorhynchus keta (chum salmon): 118397985
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Entry
118397985 CDS
T09424
Symbol
trps1
Name
(RefSeq) zinc finger transcription factor Trps1 isoform X1
KO
K22040
atypical GATA-binding protein TRPS1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118397985 (trps1)
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
118397985 (trps1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Znf_C2H2_Trps1_4th
zf-C2H2_Trps1_3rd
zf-C2H2_Trps1_1st
zf-C2H2_Trps1_2nd
zf-C2H2_Trps1_5th
GATA
zf-C2H2_ZNF462_11
Motif
Other DBs
NCBI-GeneID:
118397985
NCBI-ProteinID:
XP_052326018
LinkDB
All DBs
Position
19:complement(23481561..23662642)
Genome browser
AA seq
1437 aa
AA seq
DB search
MLGRDMVRKKNPPLRSFGGEEEGEGETLASEATGPDSEDSTGSQASEPNGADGLLPAEPG
RAHVPVTDDQEDPSSSPGSVSGSIEQDGGGGRGDGGAGTGTVPTVGSDTPGFNYPSHKKG
GNVASFPCHEVTDSDLPALASRAQPDGAVSLSPFRSEPDEGGGGQARSPAGELLLGERGE
AGEGGGVEGVLLLGAQGRGYSSASGVIVQGVTRNGEDRDPSYSPTGGLSGHQDGMDSSGY
PLLRPLHPQRVLGEGAEDTMPSPLGPETGVAPPSSPKLQDFKCNICGYGYYGNDPTDLIK
HFRKYHLGLHNRTRQDAELDTKILALHNMVGFSPQSLHTKDATRPPSHAALTGVLQDAAG
STRLLLNGTYDVQVTLGGTFIGIGRKTPDCQGNTKYFRCKFCNFTYMGSSSLELEQHFLS
AHPNKMKSHPPQLPNDDKPSDRRGNCVTRGGGAEGAEPGKWTDRVAVRAEDDSVAGYSVP
IRATDSPGWTGTDGGATAADYYWCKYCSFSCESPSSQRLLEHYEKRHNQPGGGGTREGSP
AERERGSSKARDRERDPDRDLTPHSRRKDKTGMGGTPGATDPETVVTSYNCQFCDFRYSM
NHGPEVIVVAPLLRHYQQAHSIHKCTIKHCPFCPRGLCSPEKHLGEISYPFACRKSACSH
CARLLLQLSPQDISPSPRPSVTHLCDQCPYATSDIDLLLLHYDSAHATHGVLEVKPEEEG
AETGRISAPKGPHGEHSCTKCHFITDVEEEIFRHYRRVHGCCRCRHCSFTASDTSSLLDH
FNTAHCQDSSASSHPSASSATTNGCSATTPSTLSIKEESKGDLKLYSLVPPEGRAAEAGP
GAEGGVKSEALDEKDTQGPKGWVEAREAQAQSHAAGLVWVPKERAGDILRGSPAQYPQGA
LHLLNAVAATQEQQHHQQKGGSAVLRDSPGLVFSLGGVDTKAFLSGQTQGGAEKPGHLVQ
QYSSPTEGKAAKEESQSLLRRRRGSGVFCANCLTTKTSLWRKNANGGYVCNACGLYQKLH
STPRPLNIIKQNNGEQIIRRRTRKRLNPDPLPSEPVGSKQQRINSEERLNGSPLERRPGE
DGPGSDGGPVPRGGEPPNALGKYEAYGSSGAKGHPSPRSTHAFLVSQTLEIHKRMPPLHI
HNKNPAEGGAEGNGVGSAGVHHMGSEGKGGSASERGSPIEKYMRPSKQASYSPPGSPIEK
YQYPFFSLPFIHNDLQSEADWLRFWTKYKMSVPGNPHYLGHMPGLPNPCQSFVPYSTFSL
PSHFPSPPPAGPESDIPLDLAIKHSKPAPTANGSTAAAKERISSADTRAMPTVPPVEKEK
EKEREQHERGEEKEEVEEGPSPQPAPPPPTVAAKPERVDQSTQDELTCKCIHCGIVFLDE
VMYALHMSCHADGGPFQCSICLHSCADKYDFTTHIQRGLHRPTVEAETKADAPMDSV
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcagagatatggtgaggaaaaagaacccccctttgagaagcttcggtggtgag
gaggaaggagaaggagagactctggcctcggaggccactgggccggatagcgaggacagt
acggggagccaggcctcagagcctaacggtgccgacgggctgctgccagccgaaccaggc
cgggcccacgtgccggtgacagacgatcaggaggacccctcctcctcccctggctctgtc
tcaggctccatcgaacaggatggaggaggagggaggggggatggaggagcaggaacagga
acagtgccgacagtcggcagcgacacgcctggctttaattaccccagccacaagaaggga
ggaaatgtagcgtccttcccctgccatgaggtgacagactcagatctgccggcgctcgca
tcccgggcccagcccgatggggctgtgtctctgtctccgttcagatcagaaccagatgag
gggggagggggtcaggcacgcagcccggctggggagctgctgctgggggagaggggggag
gccggggagggaggaggtgtagaaggggtgctgctgctgggtgcccaggggaggggctac
agcagtgccagcggcgttatcgtccagggcgtcacccgtaatggcgaggacagggacccg
tcctacagccccacaggaggtctctcaggtcaccaggatggtatggatagctctggatac
cctttgctacgccctctccacccacaaagggtgttaggtgagggggccgaggacaccatg
cccagtcccctggggcccgagacaggggtagcccctccttcctctcccaaattgcaggac
ttcaagtgcaacatctgtgggtatggttactatgggaacgaccccacggacctgatcaaa
cacttccggaagtaccacctgggcctgcacaaccgcacgcggcaggacgcggagctggac
actaagatactggccctgcacaacatggtgggcttctctccacagagcctccacaccaaa
gatgctacccggcccccgtcccacgctgccctgaccggagtgctacaggatgcagcaggg
tccacacggttgttactcaacggcacctacgacgtacaggtgacgctgggaggcaccttc
attggcatcgggaggaagactccggactgtcagggaaacaccaagtacttccgctgcaag
ttctgtaacttcacctacatgggcagctcctccttggagctggagcagcactttctgtct
gcccacccgaacaagatgaagtcccaccccccacagctgcccaatgacgacaagccctcg
gacaggaggggcaactgtgtgacacggggcggtggtgcagagggggcggaaccgggaaag
tggacggaccgggtggcggtccgtgcggaggacgactcggtggctggctactctgttccc
atccgcgccaccgactcccctggctggacggggaccgacggcggcgccacagcggcggac
tattactggtgtaagtactgcagcttcagctgtgagtcgcccagctcacaacgcctcctg
gagcactatgagaagagacacaaccagcctgggggaggagggaccagggagggcagccca
gccgagagggaacgaggaagcagcaaggccagggacagagagagagaccctgatcgagac
ctgaccccccacagccggaggaaagacaagacaggaatgggtggcacaccgggggcaaca
gacccagagacggtggtgaccagctacaactgccagttctgtgacttccgctactccatg
aaccacgggcctgaggttattgtggtggcgcctctgctccgccactaccagcaggcccac
agcatccataagtgcaccatcaagcactgcccgttctgcccgcgtggcctctgcagcccc
gagaagcacctgggggagatttcctacccgttcgcctgcaggaagagtgcctgctcccac
tgtgcccgcctcctactccagctgtctccccaggacatctccccgtcccccaggcccagt
gtcacccacctgtgtgaccagtgtccctatgccaccagcgacatcgacctgctcctgctg
cactacgacagcgcccatgccacccatggcgtgctggaggtcaagcccgaggaggagggc
gcagagacggggaggatctcggcccccaagggccctcacggggaacactcatgcaccaag
tgccatttcatcacagatgtggaggaggagatcttccgtcactacaggagagtccacggc
tgctgccggtgccgccactgcagctttacggcctctgacacctcatcacttctggatcac
ttcaacacggcccactgtcaggattcctccgcctcctctcatccctccgcttcctccgcc
accaccaacggctgctccgccaccaccccctccaccctcagcatcaaggaggagagcaag
ggcgacctcaagctctacagtctggttcccccggagggtcgcgccgctgaggcagggcca
ggtgccgagggaggggtgaagagtgaggccctggacgagaaggacacccagggccccaag
ggatgggtggaggccagagaggcccaggcccaatcccacgcagcaggcctagtatgggtg
cctaaggagcgggccggggacatactgaggggtagtccggcccagtatccccagggcgcc
ctgcatctactcaatgctgtggccgccactcaggagcaacagcaccaccagcagaagggg
gggtcagcggtgctcagggactccccaggcctggtgttcagcctggggggggtcgacacc
aaggctttcctgtcaggacagacccagggcggtgccgagaagcccgggcatctggtgcag
cagtactcctcacccaccgaaggcaaggccgccaaggaggagtcccagtcgctcctaagg
agacgacgaggctcaggggtattctgtgccaactgtctgaccaccaagacctcgctgtgg
aggaagaatgccaacgggggatatgtgtgcaacgcgtgtggcctctatcagaagctccac
tcaactccacggccgctgaacatcatcaagcagaacaacggcgagcagatcatccgcaga
cgcacgcggaagcgcctcaaccccgatcctctgccctccgaacctgtgggctccaagcag
cagcgaatcaacagcgaggagcgccttaatggcagtcccctggagcgtcggccaggagag
gatgggccaggctcagacggaggacccgttcctcgcggaggggagcccccgaacgccctg
ggcaagtacgaggcctacggctcctctggggctaagggccaccccagccctcgctccacc
catgccttcctggtcagccagaccctagagatccacaagcgtatgcctcctttgcacata
cacaacaagaaccctgcggagggaggggcggaggggaacggggtgggctcagccggggtc
catcacatgggctcggaggggaaaggcggctcggcctccgagaggggtagccccatcgag
aagtacatgcgcccttccaaacaggctagctactcgccaccaggcagccccatcgagaag
taccagtacccgttcttcagcctgccctttatccacaacgacctgcagagcgaggccgac
tggttgcgcttctggactaagtataaaatgtctgtgccgggcaacccacactacctaggc
cacatgcctggtctgcccaacccttgccaaagctttgtgccttactccaccttcagcctg
ccctcacacttcccttccccaccccccgccggccccgagagtgacatccctctcgacctg
gccatcaaacattccaaaccggcccccaccgccaacggctccaccgccgctgccaaggag
aggattagcagcgccgacacacgggccatgcccactgtccccccagtagagaaggagaaa
gagaaagagagagagcagcatgagagaggagaggagaaggaggaagtagaagaggggcca
tcgccccagccagctcctcctcccccaaccgttgcagctaagccggagagggtggaccag
agcacgcaggacgagctgacctgcaagtgcatccattgtggcatcgtcttcctggatgag
gtgatgtacgccctacacatgagctgccacgccgacggagggcccttccagtgcagcatc
tgcctgcactcctgcgcagacaagtatgacttcaccacacacatacaacgagggcttcac
cggcccaccgtcgaagctgagacgaaggccgatgctccaatggactctgtgtga
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