Oncorhynchus keta (chum salmon): 118398027
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Entry
118398027 CDS
T09424
Name
(RefSeq) retinoic acid receptor beta-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118398027
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oke03310
]
118398027
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118398027
Nuclear receptors [BR:
oke03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
118398027
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118398027
NCBI-ProteinID:
XP_052326104
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Position
19:complement(27511259..27776896)
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AA seq
495 aa
AA seq
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MKTASWARPRSPSPQPRPPHSPSPEPQLVQMRRYRPGVGVYPFLFPSVISALPLANRLAS
PPALRLQVQQPSSSSSTPSPAAIETQSTSSEELVPSPPSPLAPPRVYKPCFVCQDKSSGY
HYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFGVGMSKESV
RNDRNKKKKESPKPELTENYELSAEQEAIIEKIRKAHQETFPSLCQLGKYTTKSSAEQRV
RLDLGLWDKFSELATKCIIKIVEFAKRVPGFTGLTIADQITLLKAACLDILILRICTRYT
PDQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFAHQLLPMEMDDTETGLLSAICLISGD
RQDLEEPSKVDQLQEPLLEALKIYVRKRRPSKPHMFPKTLMKITDLRSISAKGAERVISL
KMEIPGSMPPLIQEMLENSEGQDGQSSTEGEDGSSPKKGIPNGGKPCPVSPDPDPDASDS
DGPTAAPKEEEEEDP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagccagttgggcccggccccgctcccctagcccccagccccgaccaccacac
tcccccagtcctgagccccagctcgtccaaatgaggcggtacaggcctggggtgggggtg
taccccttcctgttcccctcggtcatcagcgctctgcccctggctaaccgactggcttct
cccccggctctgaggctgcaggtccagcagccctccagcagcagtagtactccatcgcct
gcagccatcgagacccagagcaccagttctgaggagctggtcccaagtcctccgtccccc
ctggccccgccccgcgtctacaagccctgcttcgtgtgccaggacaagtcctcggggtac
cactatggtgtcagcgcctgcgagggctgcaagggttttttccgtagatccatccagaag
aacatggtgtacacgtgtcaccgggacaagaactgcatcatcaacaaggtgaccaggaac
cgctgtcagtactgccggctccagaagtgctttggcgtgggcatgtccaaagagtctgtc
cggaacgaccgcaataagaagaagaaggagagtcccaagccagagctgaccgaaaactat
gagctgagtgcagaacaagaggccatcatagagaagatacgcaaggctcatcaggagacc
ttcccatcgctctgccagctggggaaatacaccacgaagtcgagtgcggaacaacgcgtg
aggctggacctggggctgtgggataagttcagtgagctggctactaagtgcattataaag
attgtggagtttgccaaacgagtgcctggcttcacaggactcaccatagctgaccagatc
acgctgcttaaagctgcctgccttgacatactgattctacgtatctgtacgaggtacact
ccggaccaggacaccatgacgttctcagacggactgacccttaaccggacccagatgcac
aacgcaggcttcggcccgctcaccgacctggtgttcaccttcgcccaccagctgctgccc
atggagatggacgacacagagacaggcctgctcagcgccatctgcctcatctctggagac
cggcaggacctggaggagccctctaaggtagaccagctccaggagcctctactggaagct
ctgaagatctacgtgaggaagaggaggcccagcaagccacacatgttccccaagaccctg
atgaagatcactgacctccgcagcatcagcgccaaaggtgcagagcgggtcatctcgctg
aagatggagatccctgggtccatgcctcctctgatccaggagatgctggagaactcagag
ggccaagacggccagagcagcaccgagggcgaggacggaagcagccccaagaagggaatc
cctaatgggggtaaaccctgccctgtgtcccctgaccctgacccagatgcttcagacagc
gacgggcccacagcggcccccaaggaggaggaggaagaggacccctag
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