Oncorhynchus keta (chum salmon): 118398153
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Entry
118398153 CDS
T09424
Name
(RefSeq) F-actin-uncapping protein LRRC16A-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118398153
Membrane trafficking [BR:
oke04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
118398153
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
PBP-Tp47_c
PBP_N
Motif
Other DBs
NCBI-GeneID:
118398153
NCBI-ProteinID:
XP_035649109
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All DBs
Position
19:complement(36099115..36128213)
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AA seq
1380 aa
AA seq
DB search
MSGPALPPGVTFSLLDFESLRDAVGRKIKLTLKKRLKLEVKGDKLENRVLALASHRVFLL
TARVPAKIEQTFNYLDIQGIISNQPTQLLLEYDRGQLSLKLGSVEDVDEVVAHIGSCLHR
ICPGLSPAKAMKKLTLKPPERTAALQSLWEDQATTDLGPCGGFSHMYWCLCDQLGLPFRE
EVQWDVDTIYQTQDTRELNLQDFVHLDNRDLVAIIVVLEYNQWFTKLSTKDYKLSTDVCE
QILRVVSRSSRLEELVLENAGLRSDFVQKLANALTCNPASVLHTLNLTNNSLEDKGISAL
SAQLAKLPTGLKHLNLSKTSISQKGVNSLAQALSANPAVPTTLTHLDLCGNSLRGDDLSN
LYNFLGQHNSLVTLDLSSSDCCLDQVCTSLLRGSLKHLSVLNMSKSVFSHRRSKDVPHSF
KQFFGTALALSSVNLSGTKLPLEALKALLLGLGCNPNLSEVSLDLSSSELRSGGSQILEG
CIAEIPNISSLDISDNGLDSDLTTLLVWLAKNRSIRHLSLGKNFNNIKSKNLSHVLDNLV
HMIQEEESPLTSLSLADSKLKGDLSIVLNALGSNTSLIRVDISGNGMGDMGAKMLAKALQ
INTKLRTVMWDKNNVSLQGLQDVAAALEKNHTIRFMPIPIIDAAQALKASPEKTEDALLK
MEQYLLRNHETRKYLQEQAYRLQQGIVTTTTQQMMDMICVKVQDHLNSLRYTETDVVQED
MKVAKNLMKDARNSKRLLPNLYHMRGSPGGMGSPIQDKLESMAGEIARVMDGQLKTLLQS
MVDTAEGLCPHVMKRSSLHQELMKAGAGRMTIPHSFITTTLLEQSGVDIINKISEVKLSM
ASFLSDRIVDEILESLSRSQNTLAEHLTRKPQPLLHQEPNKMEVLEETVLQPEAQTQEQS
PHHPERLEEMDTCVSKRKSILCRMLRPVSVAFEMEFDLDKALEEVPIYEEDPPPPAPSDK
KPTYFGELPTMEARKLEHHTKLRPKPKKRTKPSREPREPICTSPPPEVEQNDLLGKVDEG
VDEFFYKKITKLSFKRPTLRGSSNIQEGSEKKRESRKSGFLNLIKSRTSKSEKSHGTAAI
TTPAAATVSTVTEEPLSPKAPLWDHSEISPDHSRKPPTPEPTEEQHSESDSKGSPHGGRH
FGVPVMGPLMGLDLLAEMRKMHEKIVSHKSDSSDKADDKKGKPKGQTSSIVPRSKPTGVT
PRSPAPQSIKPHMGPHTLGPLSPRASSSHNPDGTPDSCLGNVSPKGPLPAPRLKREPSDY
EREEESSHINVELTGDPRPFDLDQEMDRSAIGGRQWSSLKRSSSVVQEVEGRERTKSLPA
SVRPSSTVDLVHCQSPGVFAKDNTEEDFSPTPDTDQRQNLRPGNMEDTMTTSQCRKKSYI
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggccggccctgccaccaggtgtcacattttccctacttgacttcgagagtctg
agagatgccgtgggaaggaagatcaagctcaccctgaagaagaggttgaaactggaggtc
aagggtgacaaactggagaaccgagttctggctttggcatcccatcgggtctttctgctt
actgcaagggtccctgccaagattgaacagaccttcaattacctagatatacaggggatc
attagtaaccagcccactcagttgttgttggagtatgaccgaggccagctgtccctgaag
cttggctctgtggaggatgtggatgaggtggtggcccacattgggagctgtctacacaga
atctgtccaggcctctccccagcgaaggcgatgaagaagttgaccctgaagcctcctgag
aggacggccgccctacagtctctctgggaggaccaggccaccacagacctagggccatgt
ggtggtttctcccacatgtactggtgtctctgtgaccagctgggtctgccattcagagag
gaggtgcagtgggatgtggacacaatctatcagacccaggacaccagggaactgaacctg
caggatttcgtacatcttgataaccgagatttggtggccatcattgtggtcctggagtat
aaccaatggttcaccaagctctccacaaaggactacaaactgtccacagatgtgtgtgaa
caaattctgcgagttgtgtcccgctccagtcgcttagaggagctggttttagagaatgca
ggtctcagaagtgatttcgtgcagaagctagccaacgctctgacctgcaaccctgcctct
gtacttcacaccctcaaccttacaaacaactccctggaggacaagggcatatctgctctc
agtgcacagcttgccaaactcccaacgggtctcaagcatttgaacctttcaaagacctcc
atatcgcaaaaaggggttaacagtctggctcaggcgctgagtgccaaccctgctgtcccc
actaccctcacacacctggacctctgtgggaactcactccgaggagacgacctctcaaat
ctgtacaatttcctgggtcaacataacagtctagtaactctggatctgtccagcagtgac
tgctgtctggaccaagtctgcacttcacttctacgaggttctctcaagcacctctcagtg
ctcaacatgtcgaagagtgttttctctcacaggagaagtaaagatgtcccgcattccttc
aagcagttctttggcactgcactggcgctgagcagtgtcaacctgtctggaaccaagctc
cccctggaggcactcaaagcacttttactaggtcttggttgcaatcctaatctcagtgaa
gtatcactggatctcagcagctctgagctaagatctggaggctctcagattctggagggc
tgcatagctgagattcccaacatctccagcctggacatctcagacaacggtttggattca
gacctgaccactctcttggtgtggctggccaaaaatcgctccatccgccacctctcactg
ggcaagaacttcaataacatcaaatcaaaaaatttgtctcatgtcttggacaacctggtg
cacatgatacaggaggaggaatcgcccctgacgtccctctccctggccgactccaagctg
aagggagatctgtccatcgtgctgaacgctctgggcagcaacaccagcctgatccgggtg
gacatcagtggcaacggcatgggagacatgggggccaagatgctggccaaggccctacag
atcaacaccaagctccggacagttatgtgggacaaaaacaatgtcagcctacaaggcctc
caggatgtggcagctgctttagaaaagaaccacaccattcgcttcatgcctatccccatc
atcgatgctgcccaggccctcaaggccagccctgagaaaaccgaggacgccctactaaag
atggagcagtatctcctaaggaaccacgagactcgaaaatacctccaagagcaagcttac
cggcttcagcaaggcattgtcacgacaaccacacaacagatgatggacatgatctgtgta
aaggtgcaggaccacctgaactccctgaggtatacagagactgacgtcgtccaggaggac
atgaaggtggccaagaacctcatgaaggacgccaggaactccaaaagactgctgcccaac
ctgtatcacatgaggggatctcctggtggcatgggcagccccattcaggacaagctagag
tccatggccggagagatagccagggtcatggatggacagctaaagacgttgttgcagtct
atggttgacactgctgagggcctctgtccccatgtgatgaagaggagcagcctgcaccag
gagctgatgaaggcaggtgcaggaaggatgaccatcccccatagcttcatcaccaccaca
ctactggaacagtcaggagtcgacatcatcaacaagatcagtgaagtgaagctcagtatg
gcttccttcctctcagaccgtatcgtggatgagatcttggaatctctgtcccgttcccaa
aacactctggcagaacacctgaccaggaaacctcaacctcttctccaccaggagcccaac
aagatggaggtgctggaggagacagtcctccaacctgaggcccagacccaggagcagagt
cctcaccatcctgagaggctggaggagatggacacatgtgtgtccaaaaggaagagcatt
ctctgcaggatgctgcggcctgtatctgtggcctttgaaatggagtttgacttggacaag
gccctggaagaagtgcctatatatgaggaggatccgccccctcctgccccatcggacaag
aagccgacttactttggcgagctgcccactatggaggcccgaaagctagagcaccacacc
aagctccgccccaaaccgaaaaagaggaccaaacctagccgagaaccacgggaaccaatc
tgcacctctccaccaccagaagtggagcagaatgacctcctggggaaagtggatgagggt
gttgatgaattcttctacaagaaaatcaccaaacttagttttaaacgacccaccctgagg
ggctcctccaacatccaggaggggtcggagaagaaacgggaatcccgtaaaagcggcttc
cttaacctcatcaagtctcgcacctcgaagtctgagaagagccatggaacagctgccatc
accaccccagctgctgcgactgtcagcactgtgacagaggagcccttgtcccccaaggct
ccgttgtgggaccactctgaaatctcccctgaccactcacgaaagccaccaacacctgaa
cccactgaggaacagcactccgagagtgacagtaagggtagtcctcatggtggccggcac
tttggagtccccgtaatgggccccctaatgggattggacctcctggcggagatgagaaaa
atgcatgagaaaatagtctctcataagtcggactcttcagacaaggcagatgataaaaaa
ggaaagccaaagggtcaaacatcgtcgatagtgcccaggtctaaacccaccggtgttaca
cccagatccccagcaccccagagcatcaagccccacatgggaccacacactttgggaccc
ctgagccctcgtgccagcagcagccacaacccagatggcacccctgactcctgtcttgga
aacgtatccccaaaaggaccactgcccgcccctcgcctgaagagagagccctcagactat
gagagggaggaggagagtagccacattaatgttgaactcacaggagaccccagaccattt
gacttggaccaagagatggacaggtctgcaattggtgggagacagtggtcctccctgaag
cgctccagttctgtggtacaggaagtagaaggtcgagaacgcaccaagtccctccctgca
tctgtgagaccttcatccacggtggaccttgtccactgccaaagccctggggtgtttgct
aaagacaacaccgaagaggacttctctcctacccctgacacggaccaaagacagaatctc
aggcctggcaacatggaggacaccatgacgacatcccagtgtagaaagaaaagctacatc
tag
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