Oncorhynchus keta (chum salmon): 118398175
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Entry
118398175 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-A-like
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118398175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118398175
03036 Chromosome and associated proteins [BR:
oke03036
]
118398175
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118398175
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118398175
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
118398175
Noncanonical PRC1 (PRC1.1)
118398175
Noncanonical PRC1 (PRC1.3/1.5)
118398175
Noncanonical PRC1 (PRC1.6)
118398175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
zf-RING_6
zf-RING_4
RING_XB3-XBAT31
zf-RING_5
zf-rbx1
zf-UDP
TRAF3_RING
zf-C3HC4_5
Zn_ribbon_Top1
Sina_RING
Motif
Other DBs
NCBI-GeneID:
118398175
NCBI-ProteinID:
XP_035649150
LinkDB
All DBs
Position
19:complement(36607165..36610628)
Genome browser
AA seq
381 aa
AA seq
DB search
MVTPVNIQNPSKTWELSLYELHRSPQEAIMDSTEIAVSPRSLHSELMCPICLDMLKNTMT
TKECLHRFCSDCIVTALRSGNKECPTCRKKLVSRRSLRRDSNFDALISKIYPSRDEYEAH
QDRVLERLNRLHNNRILSSSIEEGLRMQALHRAQRVRKPAQESDNTTFSGGEDNGDTRSH
LSHDSAPSHVVLPPSHTPPEAGHTRNPKRPRESDGSVPEMDGGSPAPPVRRHKESPGSEI
ELVFRPHPLLVNTQDYSQTRYVKTTANATVDHLSKYLALRIALEDRQRDSQSDAGTEKEG
GAKGGDAAAEGASLKNISEKQYTIYIPISGGQFSTLNGSLTLELVNEKYWKVRKPLELYY
APTKDQQPQPSQPKSPQPKEV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggtgactccagtcaacatccaaaaccccagtaagacgtgggagctgagcttgtatgag
ctgcacaggagcccacaggaggcaatcatggacagcacagagatagcagtgtcccccagg
agcctccacagtgagctgatgtgccccatctgtctggacatgctgaagaacaccatgacc
accaaggagtgcctgcaccgcttctgctccgactgcatcgtcactgcactccgatcaggg
aacaaggaatgccccacgtgccgaaagaagctggtgtcgagacgctcattgcgccgtgac
tccaacttcgacgccctcatctcaaagatctaccccagccgggacgagtacgaggcccac
caggaccgggtgctggagagactcaaccgactgcacaacaatcggatactcagctccagc
atcgaggaggggctacgcatgcaggcacttcacagagcccagcgagtgcgcaaaccggcg
caggagagtgacaacacaaccttcagtggtggcgaggacaacggggacacacggtcacac
ctctcccacgactccgctccctcccatgtggtcctccccccgagccacaccccccctgag
gccgggcacacccggaaccccaagcggcccagagaatcggacgggtcggtcccggagatg
gatgggggcagccccgcgccaccagtccgccgccacaaagagagccccggctccgagatt
gagctggtgttccgcccacatcccctgctggttaacacacaggactacagccagaccaga
tatgtgaagaccacagccaatgcaacagtggaccacctgtctaagtacctggctctgcgt
atcgctctggaggacagacaaagagacagccaatcagatgcagggacagagaaagagggg
ggtgcgaaaggaggggacgcagcagcagaaggggccagcctgaagaatatcagtgagaaa
caatacaccatctacattcccatatcagggggccagttctctactctcaatggctccctg
actctggagctggtaaatgagaagtactggaaggtcagaaagcctctggagctctactat
gcccccaccaaggaccaacagcctcaaccatcacagccaaagtccccacagcccaaagag
gtgtga
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integrated database retrieval system
