Oncorhynchus keta (chum salmon): 118398257
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Entry
118398257 CDS
T09424
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118398257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118398257
03016 Transfer RNA biogenesis [BR:
oke03016
]
118398257
03012 Translation factors [BR:
oke03012
]
118398257
04131 Membrane trafficking [BR:
oke04131
]
118398257
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118398257
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118398257
Transfer RNA biogenesis [BR:
oke03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
118398257
Translation factors [BR:
oke03012
]
Eukaryotic type
Elongation factors
118398257
Membrane trafficking [BR:
oke04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
118398257
Exosome [BR:
oke04147
]
Exosomal proteins
Proteins found in most exosomes
118398257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
118398257
NCBI-ProteinID:
XP_035649311
LinkDB
All DBs
Position
19:complement(39025166..39029207)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASPNMGWFKGWKVERKEGGASGVTLLEALDSILAPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
AALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGNFTAQVIILNHPGTISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIIVMVPGKPMCVESFAAYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASTGKVTKSAIKATKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacattgtggtcattggccatgtcgactccggaaag
tcaaccaccacaggtcatctgatctacaaatgcggaggcattgacaagagaaccattgaa
aagttcgagaaggaagccgctgagatgggcaagggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagagggagcgtggtatcaccatcgacatttccctgtggaagttc
gagactgccaagtactacgtcacaatcattgatgcccctgggcacagagactttatcaag
aacatgatcactggtacctctcaggctgattgcgctgtgctgattgttgctggtggtgtg
ggtgagtttgaggctggtatctccaagaacggccagacccgtgagcacgctctcctcgcc
tacactctgggagtgaaacagctcattgttggcgtcaacaagatggactctactgagccc
ccctacagccagaagcgttttgaggagatccagaaggaggtcagcacctacatcaagaag
attggctacaaccctgccactgtcgcctttgtgcccatctctggatggcatggggacaac
atgctggaggctagccccaacatgggctggttcaagggatggaaggtcgaacgtaaggag
ggtggcgctagcggtgtgacccttctggaggctctggactctatcctggccccttcccgc
cccactgacaagcccctccgtctgcccctgcaggacgtctacaaaatcggcggtattgga
acagtacccgtgggccgtgtggagactggcaccctgaaggccggtatgatcgtcaccttc
gcccccgctaatgtcaccactgaggtgaagtctgtggagatgcaccacgagaccctggaa
gcggctctacccggtgacaatgttggcttcaacgtcaagaacgtgtccgtcaaggatatc
cgtcgtggcaacgtggctggagacagcaagaacgaccccccaatggaggccggcaacttc
acagctcaggtcatcatcctgaaccaccccggcaccatctcccagggctatgcccccgta
ctggattgccacactgctcacatcgcctgcaagttcagcgagctcaaggagaagatcgac
cgtcgttccggcaagaagcttgaggacaaccccaaagccctgaaatctggagacgccgcc
atcattgtcatggtgccaggaaagcccatgtgtgtggagagcttcgctgcctaccctccc
cttggtcgttttgctgtgcgcgacatgagacagaccgttgccgttggtgtcatcaaggcc
gttgacaagaaggctgccagcactggcaaggtgaccaagtctgccattaaggccaccaaa
gccaaatga
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