KEGG   Oncorhynchus keta (chum salmon): 118398257
Entry
118398257         CDS       T09424                                 
Name
(RefSeq) elongation factor 1-alpha-like
  KO
K03231  elongation factor 1-alpha
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118398257
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118398257
   03016 Transfer RNA biogenesis [BR:oke03016]
    118398257
   03012 Translation factors [BR:oke03012]
    118398257
   04131 Membrane trafficking [BR:oke04131]
    118398257
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oke04147]
    118398257
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     118398257
Transfer RNA biogenesis [BR:oke03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    118398257
Translation factors [BR:oke03012]
 Eukaryotic type
  Elongation factors
   118398257
Membrane trafficking [BR:oke04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    118398257
Exosome [BR:oke04147]
 Exosomal proteins
  Proteins found in most exosomes
   118398257
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Gtr1_RagA
Other DBs
NCBI-GeneID: 118398257
NCBI-ProteinID: XP_035649311
LinkDB
Position
19:complement(39025166..39029207)
AA seq 462 aa
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASPNMGWFKGWKVERKEGGASGVTLLEALDSILAPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
AALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGNFTAQVIILNHPGTISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIIVMVPGKPMCVESFAAYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASTGKVTKSAIKATKAK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggaaaggaaaagatccacatcaacattgtggtcattggccatgtcgactccggaaag
tcaaccaccacaggtcatctgatctacaaatgcggaggcattgacaagagaaccattgaa
aagttcgagaaggaagccgctgagatgggcaagggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagagggagcgtggtatcaccatcgacatttccctgtggaagttc
gagactgccaagtactacgtcacaatcattgatgcccctgggcacagagactttatcaag
aacatgatcactggtacctctcaggctgattgcgctgtgctgattgttgctggtggtgtg
ggtgagtttgaggctggtatctccaagaacggccagacccgtgagcacgctctcctcgcc
tacactctgggagtgaaacagctcattgttggcgtcaacaagatggactctactgagccc
ccctacagccagaagcgttttgaggagatccagaaggaggtcagcacctacatcaagaag
attggctacaaccctgccactgtcgcctttgtgcccatctctggatggcatggggacaac
atgctggaggctagccccaacatgggctggttcaagggatggaaggtcgaacgtaaggag
ggtggcgctagcggtgtgacccttctggaggctctggactctatcctggccccttcccgc
cccactgacaagcccctccgtctgcccctgcaggacgtctacaaaatcggcggtattgga
acagtacccgtgggccgtgtggagactggcaccctgaaggccggtatgatcgtcaccttc
gcccccgctaatgtcaccactgaggtgaagtctgtggagatgcaccacgagaccctggaa
gcggctctacccggtgacaatgttggcttcaacgtcaagaacgtgtccgtcaaggatatc
cgtcgtggcaacgtggctggagacagcaagaacgaccccccaatggaggccggcaacttc
acagctcaggtcatcatcctgaaccaccccggcaccatctcccagggctatgcccccgta
ctggattgccacactgctcacatcgcctgcaagttcagcgagctcaaggagaagatcgac
cgtcgttccggcaagaagcttgaggacaaccccaaagccctgaaatctggagacgccgcc
atcattgtcatggtgccaggaaagcccatgtgtgtggagagcttcgctgcctaccctccc
cttggtcgttttgctgtgcgcgacatgagacagaccgttgccgttggtgtcatcaaggcc
gttgacaagaaggctgccagcactggcaaggtgaccaagtctgccattaaggccaccaaa
gccaaatga

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