Oncorhynchus keta (chum salmon): 118398258
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Entry
118398258 CDS
T09424
Name
(RefSeq) elongation factor 1-alpha, oocyte form-like
KO
K03231
elongation factor 1-alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118398258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118398258
03016 Transfer RNA biogenesis [BR:
oke03016
]
118398258
03012 Translation factors [BR:
oke03012
]
118398258
04131 Membrane trafficking [BR:
oke04131
]
118398258
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118398258
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118398258
Transfer RNA biogenesis [BR:
oke03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
118398258
Translation factors [BR:
oke03012
]
Eukaryotic type
Elongation factors
118398258
Membrane trafficking [BR:
oke04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
118398258
Exosome [BR:
oke04147
]
Exosomal proteins
Proteins found in most exosomes
118398258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
118398258
NCBI-ProteinID:
XP_052326512
LinkDB
All DBs
Position
19:complement(39029333..39033240)
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AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETGRYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVTTYIKK
IGYNPATVAFVPISGWHGDNMLEASANMAWFKGWKVERKDGNANGVTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
SAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGTFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDAPKFLKSGDAAIVDMIPGKPMCVESFQEYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASSGKVTKSAVKAGKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatacacattaacatcgtggtcattggccatgtcgactccggcaag
tcaaccaccacaggccatctgatctacaagtgcggaggcattgacaagagaaccattgaa
aagttcgagaaggaagcagctgagatgggcaagggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagagggagcgtggtatcaccatcgacatttctctgtggaagttt
gagaccggcaggtactacgtcacaatcattgatgcccctggacacagagatttcatcaag
aacatgatcactggtacctctcaggctgattgcgctgtgctggttgttgctggtggtgtg
ggtgagtttgaggctggtatctccaagaacggccagacccgtgagcacgctctcctcgcc
tacactctgggagtgaaacagctcattgttggcgtcaacaagatggactctactgagccc
ccctacagccagaagcggtttgaggagatccagaaggaggtcaccacctacatcaagaag
attggctacaaccctgccactgtcgcctttgtgcccatctctggttggcatggggacaac
atgctggaagccagcgccaatatggcctggttcaagggatggaaggtcgaacgtaaggat
ggcaacgccaacggtgtgactctgctagaggccctggactcaatcctgcccccctcccgc
cccacagataagccccttcgtctgcccctccaggatgtctacaaaatcggtggtattgga
acagtacccgtgggccgtgtggagactggcaccctgaaggccggtatgatcgtcaccttc
gcccccgctaatgtcaccactgaggtgaagtctgtggagatgcaccacgagaccctggaa
tcggccatgcccggtgacaatgtcggcttcaacgtcaagaacgtgtccgtcaaggatatc
cgtcgtggcaacgtggctggagacagcaaaaacgaccccccaatggaggccggcaccttc
accgctcaggtcatcatcctgaaccaccctggccagatctcccagggctatgcccctgtg
ctggattgccacactgctcacatcgcctgcaagtttagcgagctcaaggagaagattgac
cgtcgttccggcaagaagcttgaggatgcccccaagttcctgaagtctggagacgctgcc
atcgttgacatgatccccggcaagcccatgtgtgtggagagcttccaggaataccctcct
cttggtcgttttgctgtgcgtgacatgaggcagactgttgctgttggtgtcatcaaggcc
gtcgacaagaaggctgcctccagcggcaaggtcaccaaatctgccgttaaggctggtaaa
aagtga
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