Oncorhynchus keta (chum salmon): 118398401
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Entry
118398401 CDS
T09424
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
118398401
Enzymes [BR:
oke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
118398401
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GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TreTu_C
Motif
Other DBs
NCBI-GeneID:
118398401
NCBI-ProteinID:
XP_035649586
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All DBs
Position
19:complement(48985539..49009399)
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AA seq
671 aa
AA seq
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METTQVTLAVRGDTSPGEVIAVVGSCEALGGWCHQRAVTLQPVEHDGTLWKRTVSVPRGA
VPTYRYFKGHFLESKSAGGPCQVIVTKWETHQQPRLMSPTESHLDIDDGQFGFHNGSVCM
DSGWLTCQTEIRLRLHFSKMSPVSITKKKYKKSRFRIKLTLEGVEEEDDEDEEVEQSAAS
WHKMTTTLETSMISGDGYKSRHSQPECGYALEASQWTEYIIHSMDPDNLELTFDFFEEDM
GKHVMPGDAHPGTAGTACLLSSFFVESGKDTGVVTLPIMKGNSRQTLGKVRVDYLVIRPI
EGLQCDMSSSFTKYWRKRSTPLDVGHRGAGSTHAAKHTKVRENTIASFKSAANHGAAYVE
FDVHLSKDCVPIVYHDLTCCISTKKKGDKHSLEMFEVPVKDLTYDQLQQLKLGHASALKV
NDHKDDDDEEEVDEHQPFPSFSQIFHAVPENVGFNIELKWICQMKDGSWEGNLSSYFNMN
LFLDIILSCVLQRAGKRRVVFSCFDPDVCTMVRQKQNKYPILFLTQGISETYPELMDIRC
RTTQIAMSFAQSENILGISAHTEELLQNLEHIREAQSKGLVVFCWGDLNNDHDNRTKLRE
QGIDGLIYDRICDDQVEQANVFKVEEQHTLQETLKSFVCSCYSIPCQAPICAANTKVHNG
TAESDSGLSSS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggagacaactcaagtgactttggcagttaggggagacacatccccaggtgaggtgata
gctgtggttggtagctgtgaagctttaggaggctggtgccatcaaagagctgtgacccta
caaccggttgaacacgatggcacattgtggaagaggaccgtcagtgtgcccagaggtgct
gtgccaacctatcgttacttcaaaggccacttcctggagtcaaagagtgcaggtggtccc
tgtcaggtgatagtcactaagtgggagacgcatcagcagccacgtctgatgagccccaca
gaatcgcaccttgatattgacgatggtcaatttggattccacaacggctcagtgtgtatg
gactctgggtggctgacgtgccagacagagatccgtctgcgtctgcacttctccaagatg
tctcccgtatccatcaccaagaagaaatacaagaagtctcgcttcaggatcaagctgacg
cttgagggtgtggaggaggaggatgatgaagatgaagaggtggagcagagtgcagcgtca
tggcacaagatgaccaccacgctggagaccagtatgatcagtggagatgggtacaagtcc
cgccactcccagcctgagtgtggttacgccctggaggcctcacagtggacagagtacatc
atccactccatggaccccgacaacctagaactcacctttgacttctttgaggaagacatg
ggcaagcacgtgatgccaggggatgcccacccagggacggcgggtacggcctgcctcctc
tcctcattcttcgtggagagtggcaaggacactggcgtggtcactctgcccatcatgaaa
ggcaactccagacagaccctgggcaaagttagagtggactacctggtgatccgtcctatc
gagggactgcagtgtgacatgagctcctccttcaccaagtactggaggaagaggagtacc
cccctggacgttggccacagaggggcggggagcacacacgcagccaaacataccaaagtc
agggagaacaccattgcttcgttcaaaagtgctgccaatcatggggctgcctatgtggag
tttgatgtccatctctccaaggactgtgtccccatcgtgtaccacgatctcacctgttgc
atctctactaagaagaagggagacaagcactctttggagatgtttgaagtgccggtcaaa
gatctcacatacgaccagctacagcagctcaagctgggccatgcttctgccttgaaggtg
aacgaccacaaagatgacgacgacgaggaagaggttgacgaacaccagcccttcccttca
ttctcgcagatcttccatgcagtgcctgaaaatgtgggcttcaacatcgagctgaagtgg
atttgtcagatgaaggatggttcgtgggaaggaaacctgtcctcgtacttcaacatgaac
ctgttcctggacatcatactgagctgtgtgctgcagagagccggcaagagacgcgtcgtc
ttctcctgcttcgaccccgacgtctgcaccatggttcgtcagaagcagaacaagtacccc
atcttgttcctgacccagggcatctctgagacctatcctgagctcatggacatccgctgc
aggaccacacagatcgccatgagctttgcgcagagcgaaaacatcctgggtatcagtgcc
cacacagaggagctgcttcagaacctggagcacatccgagaggctcaatctaaaggcctg
gtggtgttctgctggggagacctcaacaacgaccacgacaacaggaccaagctaagggag
cagggcatcgacggactcatctatgacaggatctgtgacgaccaggttgagcaggccaac
gtcttcaaagtggaggagcagcacactctgcaggagactctgaagagctttgtgtgctcc
tgctactccatcccctgccaggcgcctatctgcgctgccaacaccaaggttcacaacggc
actgcagagtccgactcgggcctcagctcttcctga
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