Oncorhynchus keta (chum salmon): 118398542
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Entry
118398542 CDS
T09424
Symbol
brf1b
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit b isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118398542 (brf1b)
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
118398542 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Cas12f1-like_TNB
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
118398542
NCBI-ProteinID:
XP_035649887
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All DBs
Position
19:57372843..57495787
Genome browser
AA seq
705 aa
AA seq
DB search
MTSRICKNCGCSEIDLDQARGNAVCTNCGSVLEDNIIVSEVQFVEGSGGISSAVGQFVSA
DGPVKAPVLGTGFHTSLGKESRAQTLQNGKRQIHNLGSQLQLNQHCLDTAFNFFKMVVSK
HLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINSPA
IDPCLYIPRFAHMLEFGEKTHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
EFRRTVKDVIGVVKVCEATLRKRLTEFEDTPTSQLTIDEFMRVDLEQECDPPSFTAGQRK
VKMQALEQELAKKLDEVQGEISLYRDEIETELENSRPKLRGIYAAYAKEIDPLDEVLSQA
SCSSPREVDPEEDEELEAVAQHLNQDFLCQVIQGEQQGDERGGEGVTEEAPPPHPPPRGG
PSLASILGPLPSAASLGLSESIHECIAEDKDSDGKSESGELDLDGIDDNEIERYILNDKE
VRVKTALWMKQNEEYLREQKEKEERITKEKEQGTYKEKPKKTSKKREPIRASTAGEAIEK
MLEQKKISSKINYDVLRDLNSKGGSGNSSPAQPTSTEESPSGPAGRKRLTRRKKQPNKTN
MGLATTIMGKRLRPLISSATKKKRAASQVTPNLTPAANPVLPNLSSPPTPNPAPPGPTMV
ESGPVAYDEVAEDEEEEEVEEPCVSALQLLGGNEYGCEAEEEEVF
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccgcatatgcaagaactgtggttgttccgagatcgacctcgatcaggctcgg
ggcaatgcagtatgcacgaactgtgggtctgtgctggaggacaacatcatcgtgtccgag
gtgcaattcgtggaaggcagtggtgggatttcgtcagctgtggggcaattcgtctcagca
gatggtccagtgaaagccccagtcctgggtactgggttccacaccagccttggaaaagag
tcccgtgctcagacgctgcagaacggaaagcggcagatccacaacctgggcagccagctg
cagctcaaccagcactgcttggacacggccttcaacttctttaagatggtggtgagcaag
cacctgacgcgcggacgcaagatggcgcacgtcattgccgcctgcctctacttggtctgc
cggactgagggcacgccccacatgcttctggacctgagtgatctcctacaggtgaacgtg
tacatcctagggaagaccttcctcctgctggctcgagagctctgcatcaactccccagca
atagacccttgcctgtacatccctcgtttcgcccacatgctggaatttggggagaagacc
catgaggtgtccatgactgcactgcgcctactacagaggatgaagagggactggatgcac
acgggacgcaggccctctgggctgtgtggggcagcgctgctggtggctgcccggatgcac
gagttccgccgcaccgtcaaggacgtgatcggagtggtgaaagtgtgcgaggccacactg
aggaaaagattgacagagtttgaggacactcccaccagtcagctgaccatcgatgagttc
atgcgggtggatctggagcaggagtgtgacccaccctctttcactgctggacagaggaag
gtcaagatgcaggcgcttgaacaagagttagcgaaaaagctggatgaagttcaaggtgaa
atcagtttgtatcgagacgagatcgagacggagctggaaaacagcaggccaaagctcaga
gggatctacgctgcctatgccaaagaaatagacccgctggacgaggtgctttctcaggcc
tcgtgctccagccccagggaggtggaccccgaggaggacgaggagctggaggcagttgcc
caacacctgaaccaggacttcctctgccaggtcatccagggggaacagcaaggggacgaa
agagggggagaaggagtgacagaggaggcaccccctccacatccaccacccagaggaggg
ccctccctagcttccatcctgggtcccttgcctagcgcggctagcctggggctcagtgag
tccatccatgagtgcatcgcagaggacaaggacagtgatggcaagtcggagagcggggaa
ttggacctggacggcatcgacgataatgaaattgagaggtatatcctcaacgacaaagaa
gtgagagttaagacggccctgtggatgaagcagaatgaggaatatctcagggagcagaaa
gaaaaggaggaaaggataactaaagagaaagagcaagggacctacaaggaaaagcccaag
aaaacgtccaagaagcgggagcccatccgtgccagtacggcgggcgaggccatcgagaag
atgctggagcagaagaagatctccagcaagatcaactacgacgtgctgcgtgaccttaac
agcaagggtggcagcggcaacagcagccctgcccagccaacctccacggaagagtcaccc
agtggccccgctgggcggaagaggctgacccgccgcaagaagcagcccaacaagaccaat
atgggcctggccaccaccatcatgggcaagagactccgtccacttatatcctctgcaacc
aagaagaagagagccgcttcacaggtgacccctaacctgaccccggctgcaaaccctgtt
ctgcccaacttgtccagcccgcctacccccaacccggcccctccaggacccactatggtg
gagagtggcccggtggcctatgacgaagtggcagaggatgaagaggaggaagaagtggag
gagccctgtgtcagtgcgttgcagctcctgggaggaaacgagtacggctgtgaggctgaa
gaggaagaggttttctag
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integrated database retrieval system
