Oncorhynchus keta (chum salmon): 118398588
Help
Entry
118398588 CDS
T09424
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X5
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118398588 (hps1)
Membrane trafficking [BR:
oke04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
118398588 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_2
Fuz_longin_3
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
118398588
NCBI-ProteinID:
XP_035649987
LinkDB
All DBs
Position
2:complement(25674152..25708733)
Genome browser
AA seq
714 aa
AA seq
DB search
MKCLLIASESAEVLFYWTDPEFELNIQEQYGASQEEGEKPPAFEDSINTLFAPIIISCST
MVDRLGDSYTSFCTENNHTYVLHQFEECLYIAVNGDREEGEEDLKRKIYVMKKMLEVLFG
MVTLSSTLIRKELRPQDTEQRTNLWKYLQNLLETYSRLQEQDQSFLVEAVERLIHPTLCE
QCIEFLERRLVQQINSSVERAGEEVLHAFILVHTKLLAFYSSRNASTLTSSDLLALIVMV
QNMYPSNIDLEDTAPEDVENTSAPDIFYTPEPSPTNRDSGTDRDSVNSGRHEESRHEESR
HEESRHEESCHEESCHEESCHVGSGTPVFQFLDPDIQMAEDSLQTLEAPPPDPSNPSRVF
LEVTLKEGCYPMMPHSMYCLPLWPGITLVLLTKIPNSNLAMSVYVFLEAFAKLEKRLSEG
LEGSAARGQTSIQDLRNKLDKFIRALGTSDIQTSQLQSVWTEFKSRAFTRGGPGFSKDLV
PWCRTMKSQLCGVYRQCFITENTVVGGNPQRLSPSLQDRALTMVQEKLMDWKDFLLVKSK
RNITMVSYLEEFPGLIHFIYVDRTAGQMIAPSLNITDRATSELGKGPLAHFIKGKVWGLV
NTSRIYLQKGYSTVTLRDGDYFFCYFLWFENETGYKLEVKDLPILPNDSAPIGMLAWDYY
RKLLRYYSKSHQGEVVKCYELLTVHLGVIPTEYILQHCSQLARKLWEPSRIPLL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtctgctgatagccagcgagagcgcggaggtcctcttctattggacagaccca
gagtttgaactcaacatccaggagcagtatggcgcgtcacaggaagagggggagaagcca
ccagcatttgaggacagcatcaacactctgtttgcccccatcatcatctcctgcagtacc
atggtggacagactgggagacagctatacatccttttgtactgagaacaaccacacctat
gtgctacatcagtttgaggagtgtctgtacatcgctgtgaacggagacagagaagagggc
gaggaggatctgaagaggaagatttacgtgatgaagaagatgcttgaggtcctcttcggc
atggttaccctcagcagcaccctgatcaggaaagagctgcgtcctcaggacacagagcag
aggaccaatctatggaaatatctacagaacctcctggagacctacagccgcctccaagag
caggaccagagctttttagtagaggcagtagagaggttgatccatcctactctatgtgaa
cagtgtatagagtttctggagcgtcgcttggtgcagcagatcaacagtagtgtggagaga
gcaggagaggaggtcctccatgcattcatactggtgcacaccaaactactagccttctat
tccagtcgtaacgctagtaccctcacctcgtctgacctgctggctcttatcgtcatggtg
cagaacatgtatcctagcaacatcgacctggaggatactgcccccgaggatgtggagaac
acctcagccccagatatattctacactccagagccttcccctactaatagggactctggg
actgacagggactctgttaattcaggcaggcatgaggagagcaggcatgaggagagcagg
catgaggagagcaggcatgaggagagctgtcatgaagagagctgtcatgaagagagctgt
catgtggggagcggtactcctgtgttccagtttttggatccagacattcagatggcagag
gacagtctccagaccctggaagctcctccccctgacccctcaaaccctagcagagtcttc
ctagaggtcacgctgaaggagggctgctatcccatgatgcctcactccatgtactgtctg
ccactctggccgggcatcactctggtgctgctcactaagatacctaacagtaacctggcc
atgtcagtctatgtgttcctggaggcatttgctaagttggagaagcgtctgagtgaaggt
ctggaggggtcagcggcccgcggccagacgtccatacaggacctccgcaacaaactggac
aagttcattagggcattgggaacctcagacatacagacgtcccagctacagagtgtgtgg
acagagtttaagagccgggcattcaccagaggaggacctggcttcagcaaggacctggtc
ccctggtgtcgtactatgaagagccagctgtgtggagtctaccgacaatgtttcatcaca
gagaacacagttgtaggagggaatccacagcgtctatcacccagtctacaggacagagct
ctcaccatggtgcaggagaagttgatggattggaaagacttcctgttggtgaagagtaag
agaaacatcaccatggtctcgtaccttgaggagttcccgggcctgatccatttcatctac
gtcgaccgcaccgctggtcagatgatcgctccatctctcaacatcacggaccgcgcaacc
tctgagctaggaaaggggccactggctcacttcataaagggcaaggtatggggcctggtt
aatacatcgaggatttacctacagaagggttattccactgtcactctgagagatggagac
tacttcttctgctacttcctctggttcgaaaacgaaacgggctacaagctggaagtaaag
gacctgccaatcctgcccaatgactccgcccccatcggaatgctggcctgggactactac
aggaagctgttgcgctattatagtaagagccaccagggggaggtggtgaagtgttatgag
ctgctgacagtccatctaggagtcatcccaacagagtacatactacaacactgtagtcaa
ttagcacgcaaactctgggagccctcacgtatacccctactgtag
DBGET
integrated database retrieval system
