Oncorhynchus keta (chum salmon): 118398726
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Entry
118398726 CDS
T09424
Name
(RefSeq) nucleoporin Nup43-like
KO
K14305
nuclear pore complex protein Nup43
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118398726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118398726
03036 Chromosome and associated proteins [BR:
oke03036
]
118398726
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118398726
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118398726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
WD_LRWD1
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
118398726
NCBI-ProteinID:
XP_035650260
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Position
19:66528878..66531497
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AA seq
372 aa
AA seq
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MEGINAKYVSQKISKTRWRPVSSSSLQQPDIFATGSWDNEDNKISIWSIGENGISGLDDE
FEGDPQLVCEHKHNGDVLDLQFLDQDRIVTASSTGAVIIFRHHHNSQTLSVSQLWERAHH
YPCDNAPCTGIVCNSPEIVTVGEDGRIILFRADQEGVLRTIENADSSTIHDVTFLRTTEI
LTVNSIGQLKIWDFRQQGNEPSQILSLTGDRVPLHCVDRHPNQQHIVATGGQDGMLCIWD
VRQGNMPFSLMEAHSAEMWEVHFHPSNPDHLFSCSEDGSLLHWETSSNSDTPSFLQGGRN
TSIVSRSAIAPEGGNQSLISSWLTGDSSKGRLETTHMLPSQTLSVNSLDVLGQCLVCGTD
GEAIYVNRRVPI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggagggtatcaatgcaaagtacgtgtcacagaaaatcagtaaaacgagatggagaccg
gtctcatcttcgtctttacagcaaccagacatctttgctactgggtcttgggataatgag
gacaacaaaatttccatttggtccatcggggagaatgggatctccggtttggacgatgaa
tttgagggagacccccaattagtatgtgaacacaaacataatggggatgttttggatctt
caatttctggatcaagacagaatagtaacagcatcatcgactggagcagtgatcatcttt
cggcatcaccacaacagccagacattgtctgtttctcaattgtgggaaagagcacatcat
tatccctgcgacaacgctccatgtactggaattgtgtgtaacagccctgagattgtcacg
gtcggggaagatggaaggatcatcctcttcagagcggaccaggaaggagtgctgcgcact
atagaaaatgctgatagtagcacaatccatgatgtgactttcctaaggactacggagatc
ctaactgtcaattcaattggccagctcaaaatatgggacttcaggcagcagggcaatgaa
ccatcacagattctttcactaactggggacagagtcccactgcattgtgtggacaggcac
cccaaccaacaacacattgtggccacaggggggcaggatggcatgctctgtatctgggat
gtgagacaaggcaacatgcccttttcacttatggaggcacactctgctgaaatgtgggag
gtccattttcatccatcaaacccagaccacctgttctcatgctcagaagatggatcactg
ttgcattgggagacttcctcaaattcagacacaccatccttcttacaaggtggacggaac
acgagcatagtttcgcgcagtgcaatagccccagaaggtggaaaccagtccctcatcagt
tcctggctcactggagactcaagtaagggacgccttgagaccactcacatgctgcccagc
cagaccctgtctgtgaacagtctggatgtgctgggacaatgcttggtgtgtgggacggac
ggagaggctatttatgtcaacagacgggtcccaatttag
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integrated database retrieval system