KEGG   Oncorhynchus keta (chum salmon): 118398726
Entry
118398726         CDS       T09424                                 
Name
(RefSeq) nucleoporin Nup43-like
  KO
K14305  nuclear pore complex protein Nup43
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118398726
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118398726
   03036 Chromosome and associated proteins [BR:oke03036]
    118398726
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     118398726
Chromosome and associated proteins [BR:oke03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    118398726
SSDB
Motif
Pfam: WD40_Prp19 WDR55 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_EML Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP EIF3I Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st WD_LRWD1 KNTC1_N
Other DBs
NCBI-GeneID: 118398726
NCBI-ProteinID: XP_035650260
LinkDB
Position
19:66528878..66531497
AA seq 372 aa
MEGINAKYVSQKISKTRWRPVSSSSLQQPDIFATGSWDNEDNKISIWSIGENGISGLDDE
FEGDPQLVCEHKHNGDVLDLQFLDQDRIVTASSTGAVIIFRHHHNSQTLSVSQLWERAHH
YPCDNAPCTGIVCNSPEIVTVGEDGRIILFRADQEGVLRTIENADSSTIHDVTFLRTTEI
LTVNSIGQLKIWDFRQQGNEPSQILSLTGDRVPLHCVDRHPNQQHIVATGGQDGMLCIWD
VRQGNMPFSLMEAHSAEMWEVHFHPSNPDHLFSCSEDGSLLHWETSSNSDTPSFLQGGRN
TSIVSRSAIAPEGGNQSLISSWLTGDSSKGRLETTHMLPSQTLSVNSLDVLGQCLVCGTD
GEAIYVNRRVPI
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggagggtatcaatgcaaagtacgtgtcacagaaaatcagtaaaacgagatggagaccg
gtctcatcttcgtctttacagcaaccagacatctttgctactgggtcttgggataatgag
gacaacaaaatttccatttggtccatcggggagaatgggatctccggtttggacgatgaa
tttgagggagacccccaattagtatgtgaacacaaacataatggggatgttttggatctt
caatttctggatcaagacagaatagtaacagcatcatcgactggagcagtgatcatcttt
cggcatcaccacaacagccagacattgtctgtttctcaattgtgggaaagagcacatcat
tatccctgcgacaacgctccatgtactggaattgtgtgtaacagccctgagattgtcacg
gtcggggaagatggaaggatcatcctcttcagagcggaccaggaaggagtgctgcgcact
atagaaaatgctgatagtagcacaatccatgatgtgactttcctaaggactacggagatc
ctaactgtcaattcaattggccagctcaaaatatgggacttcaggcagcagggcaatgaa
ccatcacagattctttcactaactggggacagagtcccactgcattgtgtggacaggcac
cccaaccaacaacacattgtggccacaggggggcaggatggcatgctctgtatctgggat
gtgagacaaggcaacatgcccttttcacttatggaggcacactctgctgaaatgtgggag
gtccattttcatccatcaaacccagaccacctgttctcatgctcagaagatggatcactg
ttgcattgggagacttcctcaaattcagacacaccatccttcttacaaggtggacggaac
acgagcatagtttcgcgcagtgcaatagccccagaaggtggaaaccagtccctcatcagt
tcctggctcactggagactcaagtaagggacgccttgagaccactcacatgctgcccagc
cagaccctgtctgtgaacagtctggatgtgctgggacaatgcttggtgtgtgggacggac
ggagaggctatttatgtcaacagacgggtcccaatttag

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