Oncorhynchus keta (chum salmon): 118398943
Help
Entry
118398943 CDS
T09424
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D isoform X1
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04020
Calcium signaling pathway
oke04080
Neuroactive ligand-receptor interaction
oke04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118398943
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118398943
04082 Neuroactive ligand signaling
118398943
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118398943
Ion channels [BR:
oke04040
]
Ligand-gated channels
Glutamate (ionotropic)
118398943
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
118398943
NCBI-ProteinID:
XP_052327949
LinkDB
All DBs
Position
20:7772581..7843476
Genome browser
AA seq
1919 aa
AA seq
DB search
MAAKPALSLLLAVLACTGPARSSPPLLLRPRERERDLGVVNIAVVHSGSSLLPETAAAGG
TGATNGGPQGRGASSSLAMVAASAPLASASAALVGGSVMTQYGPANVIYLTVNESSPASL
LLQLCELLATTPLQGLVFEEERPPPPDQAPLAPMLEFVSAQTGVPVVAVGGGAGLGREPQ
ESGSIYLQFTCSTAMQLDVVFEVLEEFDWTSFSVVATRHHGYEDFLAMVEALTDGSFIGW
EKKGVVMLNVTDDPGGTRASRLLKENEAQVRLLYCSQEEAALIFKAAWSSGQAGHSHMWF
AVGPALSGLGLEGLPKALFAVRPQGWRDEPRRRIAKGVSVLTHGAMALRKEYGWARGPHY
FAGNCQTDGNQTQRVPDRIRFFSNITLSGRDYSFNSDGYLSNPVLDVISYTEGKGWEEVG
TWQNGVLDLIIQPFSRYGSFLKPLDDTQHLKVVTLEERPFVIVEPADPGTNSCIRDSVPC
RLPLNTTNVPVDEKSSKHCCKGFCIDVLKRLAKIVGFSYDLYLVTNGRHGKRGSDGQWNG
MVGEVVYKRADMAIGSLTVNKERSEVVEFSVPFVETGISVMVSRSNGTVSPSAFLEPYSP
AVWVMMFVMCLSVVAVTVFIFEFFSPVGYNRSLQSAKKTGGSKFTIGKSIWLLWALVFNN
SVPVENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQQPTE
QYPPLRFGTVPNGSTEENIRSNYANMHNFMIRNNQKGVEEAIDNLKTGKLDAFIYDAAVL
NYMARKDEGCKVMTIGSGKVFATTGYGIALHKNTRWKRPVDLALLQLVGDDEIDMLERLW
LSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKIRQCLGRSGGM
DFLLALSRGMYSCCKFEDETVSGGLRNTLPLYQSVPTMPPPPQSHISAAVTCNTTLAMVQ
QQQRHHHQQHEQQQQQQQQQAYSMFPAGSPPTTGHSAMALGPSNSPLLEGPMPCSTFLPR
HDRRLAVVDRWNRPKPGTDKPIGGSGGIPDMAQFQQGLPPHWAGGASGGDGSLDEYKRYY
GPIDPEGLGANADPQTGGSQTPKMNQRGTKSSGMPRLPSKGPPPGHLMSKPPLPLPSSPH
PPPFWRRGSLPKRKGSGGPLYENILPLGRRGGGRYGVRDGGGRRGRRPPPLPLPVPVASP
ALTTPTTPSHSALYTSSSCSSTSSSSSSSSSSVSPSRSNSPSSSTITYTSSQSFKYRAGS
RDVEDVYDSDELTEESSLLLGRRKGKSRRMSSRSLPCSPPPPPVPPRKPRLQYERERAGS
QLAQLQEWWASWGERERRRGTGTRAEGKEEKRHHKERERERKRRKKGRKKKKREEKERER
ERKQRKVKEKKKKREDKAKRRDRGKRSEHEEGGGEQRGQLKAIMQEAYSSYPALRRDSMR
KKSEGSIRSYGWDIPREEERRDSEEKARDGEDTRGKERHRSPYSRHRHAGRPSSSSKQCQ
SPRKPSTAVKFWGAGNPSSEIPSSAFLPLIPLSSRRRSKGSGRAALGKEGETRPLLARNE
RVEVHSKEGLWFHEWDSEDADEDSEEERRKVEQEKRHERRRRTASESERESDKMVGIYSD
DDGSSGEFGKFERYWEGHEGRAVGGIGGGGWFFGTYPAREKAGSINSRDGSLLGRGEGWG
GAGGVGEGGWGSGRIGGTQWPPPPLTPPAPRRYWSVDKLPVKEEKKERRKDKDKGRGDVA
CNCQSALEHQHAHSKLAKVSSPSQEELFLHCQSFVTSANSKRHSFKPDRTQNQPKSGSQS
NLSIQRTDRIRQPSTSQVLIPSLPPATLPALPAPPSSSHPIHIPPPNSSSSVSSPSVVSS
TPGAPQPSSMASASAKVLYQRLRSVPPPQRLQSPHLPLKAKSLCSRRGSAHFSSVESEV
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaagcccgccctctccctcctgttggccgtgttggcctgcacggggcccgcc
cgctcctcccctcccctcttgctccgcccccgggagagagagagggacttgggtgtagtc
aacatcgctgtggtccactcgggctcctccctgctcccggagacggccgctgctggggga
acgggtgccacgaacgggggtcctcaggggaggggggcctcgtcgtcattggctatggtg
gcggcgtctgcgccactggcttctgcttcagcggctctggtgggcggtagcgtgatgacg
cagtatggcccagccaacgtgatctacctgacggtgaacgagagcagcccggcgagcctt
ctgctgcagctgtgtgagctgctggccactacgccactccaggggctggtgttcgaggag
gagaggccaccgccacccgaccaggctcccctggcccccatgctggagtttgtctcggcc
cagaccggagtgcctgttgtggccgtgggaggaggggccggcctgggcagggagccacag
gaaagcggctccatctacctccagttcacctgctccacagccatgcagctggacgtggtc
tttgaggtgctggaagagttcgactggacctccttctccgtggtggccacgcgtcaccac
ggctatgaggacttcctggccatggtggaggcactgacggacggatccttcatcggctgg
gagaagaagggcgtggtcatgctcaacgtcaccgacgacccgggaggaacgcgcgcgagc
aggctgctcaaggagaacgaggcgcaggtgcgtctcctctactgctcccaggaggaggcc
gctctgatcttcaaggcggcctggtcctcgggtcaggccggacactcccacatgtggttc
gccgtggggccagccctgtccggccttggcctggagggcctccccaaagccctgttcgca
gtgcggccgcagggctggagagacgagccccgtcggaggattgccaaaggggtgtctgtg
ctaacccacggagccatggctctgaggaaggagtacggctgggcccgagggccacactac
ttcgcaggcaactgccagacagatggcaaccagacgcaaagggtgccagacaggatcagg
ttcttcagtaacattacgctgagtggccgggactactcgttcaacagtgacggctacctg
tccaatccagtgctggatgtgatttcctacaccgagggaaaaggctgggaggaggttggc
acgtggcagaacggtgttctggatctcatcattcagccgttttcacgctacggctccttc
ctcaagccgctggatgacacccagcacctcaaggtggtcaccctggaggagaggcccttt
gtcattgtggagccagccgacccaggcaccaactcctgcatccgggactcggtgccctgc
agactaccgcttaacaccaccaatgtgccggtggatgagaaatcgtcgaagcactgctgc
aaaggcttctgcattgacgtcctcaagcgattggccaaaatagtgggcttctcctatgac
ctctacctggtgaccaatggcagacacgggaagagggggagtgatgggcagtggaatggc
atggtcggggaggtggtttataaacgggccgacatggccattggctccctgaccgtcaac
aaggagaggtcggaggttgtggagttctcagtgcccttcgtggagacaggcatcagcgtc
atggtctcccgtagcaacggcaccgtctcgccgtcggccttccttgagccatacagccca
gctgtgtgggtgatgatgttcgtcatgtgcctctccgtggtcgctgtcacagtctttatt
ttcgagttcttcagtcccgtcggctacaaccgcagcctgcaaagtgcaaagaagacaggg
ggctctaaattcaccatagggaagtctatctggctgctgtgggcattggtcttcaacaac
tcagtgcctgtggagaaccccagaggaaccaccagtaagatcatggtgctggtgtgggcc
ttctttgcggtcatcttcctggcctcctacacggccaacctggcagccttcatgatccag
gaggagtacatcgacactgtgtctggcctcagcgacaagaagttccagcagcccactgag
cagtaccccccgctccgatttggcaccgtccccaacgggagcaccgaggagaacatccgc
agcaactacgccaacatgcacaacttcatgatccgcaacaaccagaagggcgtggaggag
gccatcgacaacctcaagactggtaaactagatgccttcatctatgatgcggctgtgcta
aactacatggcgaggaaagacgagggctgtaaggtgatgaccattggctcgggcaaggtg
tttgccaccacgggctacggcatcgcccttcataagaacacccgctggaaacgccccgtg
gatttggccctcctgcagctggtgggagacgacgagatcgacatgctcgagcgcctgtgg
ctctcggggatctgtcacaacgacaagattgaggtgatgagctccaagctggacatcgac
aacatggcgggggtcttctacatgctgctggtggccatggggctcagtctgctggttttc
gcctgggagcacctggtgtactggaagatcaggcaatgcctgggccgttccggtggcatg
gacttcctattggctctcagcaggggtatgtacagttgctgcaagtttgaagatgaaacc
gtctctggaggcctccgaaacacacttcccctttatcagagtgttcccacaatgccgcct
ccaccccagtcccacatctcagcggctgtaacctgtaacaccactcttgccatggtgcag
cagcagcagaggcatcatcaccagcagcatgagcagcagcagcagcagcagcagcagcaa
gcatacagcatgtttcctgctggatctcctccaactactgggcactctgcaatggccctt
gggccatcaaacagtccccttttggagggtcctatgccgtgctccacttttctgcctcgc
catgaccgcagattggctgtggtagaccgctggaaccgtcccaagcccggcacggacaag
cctattggtggcagcggtgggatcccagacatggcacagtttcaacagggcttgccccct
cactgggctgggggagccagtggaggggacggtagtctggatgaatacaagcgatactat
ggcccgatcgatccagagggcttaggggcaaatgctgacccacaaacaggtggctctcaa
acccccaaaatgaaccagagggggacaaagtcctcaggaatgccacggctaccttctaaa
ggaccgccccctggtcacttaatgtccaagccccctttaccgctcccctcatccccacat
ccaccgccattttggagaagaggcagcctcccgaaaagaaagggctctggggggcctctg
tatgagaacatcctccctttggggagaagagggggagggcgatacggagtaagggatgga
ggtggcaggcgaggccgtcgccctcccccactcccattgcctgtccctgtcgcgtcccct
gccctcactacccctaccactccctctcactccgccctctacacctccagctcctgctcc
tccacctcatccagttcatcctcgtcctcatcctccgtctccccctcacgctccaactcc
ccctcatcctccaccatcacatacacatcgtcccagagttttaagtacagggctggcagt
agggatgttgaggacgtctatgactctgatgagctgacagaggagtctagcctcctgcta
ggacggagaaagggcaaatcccgacgcatgtcctctcgctcactgccttgcagtccgccc
ccaccgcctgtgccaccccgcaagcctcgtctgcagtatgagagagagagggctgggagc
cagctagcccagctgcaggagtggtgggcctcctggggcgagagagaaagacgcagagga
acaggaaccagggccgaggggaaggaggagaaacggcatcacaaagagcgagaaagggag
agaaagaggaggaagaaaggacggaagaaaaaaaagagagaggagaaggagagggagcgg
gagcgcaagcagcgtaaagtgaaggagaagaagaagaagagagaggacaaggcgaagaga
agagaccggggcaagcggtcagagcacgaggagggaggtggtgagcagagagggcagctc
aaagcgataatgcaagaggcctactcctcctacccggccctgaggcgtgactctatgagg
aaaaagagtgaaggttctatcagaagttacggatgggatattccaagggaggaagagagg
agggacagcgaggaaaaggcaagagatggagaggacactagaggcaaggaaaggcacaga
agtccttactctcgccacaggcatgcaggtaggccttccagttccagcaagcagtgccag
agccccagaaaaccctcaaccgctgtcaagttctggggagcgggaaacccatcgtcagag
attccttcgtctgcatttctgccactgatccctctctcgtccaggcgcaggagtaagggt
tcaggtagagcggccctggggaaagaaggggagacgcgccccctgttggccaggaacgag
agagtggaggttcactccaaagagggtctgtggtttcacgagtgggactccgaagatgcg
gatgaagattccgaggaggaaaggagaaaagtggagcaagagaagagacacgaaagaaga
cgaaggaccgcatcagagtccgaaagggaaagtgataagatggtgggcatctactcagac
gatgacggctcctcgggagaatttggaaagttcgaaaggtactgggagggtcatgagggt
agagcggttgggggaataggagggggaggctggtttttcggcacttatcccgccagagaa
aaagccggcagcataaacagtagggatggctcgttattgggccgtggggagggatggggc
ggagcagggggagtaggggaaggtggctggggatcagggaggataggtggtacacagtgg
cctccacctccattgacaccaccagctcctcgaagatactggtccgtggacaagcttccc
gtgaaggaggagaagaaagagagacggaaggacaaggacaaagggcgaggtgatgtggct
tgcaactgccaatctgccctcgaacatcaacacgctcactctaaattggccaaggtgagc
tcccctagccaggaggaactatttctacactgtcaaagctttgtgaccagcgccaattcc
aaacggcattccttcaaacccgaccggacccagaatcaacccaaatcgggaagccagtcc
aacctcagcatccagcggacagaccgcattcggcagccttctacatcgcaggtcctcatc
ccctccctccctccagcaacactcccagcccttcctgcccctccctcctcatcccatccc
atccacatccctcctccgaactcctcctcttcggtctcgtctccctctgtagtatcctcc
accccaggcgccccccagccgtcttctatggcttctgcgagtgccaaagtcctgtaccag
agactgcgctcagtgcctccgccccaaaggttacagtcacctcacctgcccctcaaggcc
aagagcctctgctcacggagggggtctgcacacttctccagtgtggagagcgaggtgtga
DBGET
integrated database retrieval system
