Oncorhynchus keta (chum salmon): 118398979
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Entry
118398979 CDS
T09424
Symbol
clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118398979 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118398979 (clasp2)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
118398979 (clasp2)
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
118398979 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT_GCN1
HEAT
TPR_DNAAF5
HEAT_MROH2B_C
TPR_CAND1
Cnd1
TOR1L1_N
RTP1_C1
VPS15-like_hel
ParcG
HEAT_DAAF5
IFRD
MMS19_C
Motif
Other DBs
NCBI-GeneID:
118398979
NCBI-ProteinID:
XP_052328274
LinkDB
All DBs
Position
20:complement(22265401..22362463)
Genome browser
AA seq
1552 aa
AA seq
DB search
MEEHDNMDYFYQQVLQKDVTRRLQVGQDFIDYLNDPQRSTDVEQDKPRLDKTVDELTGWV
NSSNYKVALLGIDIAGAFVDRLGERFRGYLGTVVPALVDRLGDSKDQVREQSQTVILRCM
EVTASPMYVWERLLPGFKHKNFRSREGVCLVLCATLNMYGAQPLSLSKIVPYLCTLTGDQ
NPQVREAATASLVDVYRHIGERVRADLGKRGLPATRLQTIYGRFDEALNSGNMALSPSHV
SQISIVLRPSPKRRQPRRIILRHNHSFEDDVDSTDGSRAQAAFKVPKIPKKPAESSTARR
PSATGPKIGGASKDGAGGIDEEDFIKAFTDVPTVQIYSSRDLEDNLNKIREICSDDKHDW
DQRAAAMKKIRSLIVAGATEYECFFQHLRLLDGAFKLSAKDLRSQVVREACITVAHLSTV
LGNKFDHGAEGILPILFNLIPNCAKVMATSGVSAIRFIIRHTHVPRLIPLITSNCTCKSV
AVRRKCFDFLDLLLQEWQTQTLERHTAVMVASIKKGIADADAEARVEARKAYWGLRNHFP
GEADSLFNSLEPSYQRSLQSSLRNAGSVASLPQSDRSSSSSQESLNRPLSSKWSAAPGRV
PAGHKGGASPGSLQRSRSDVDVNAATVAKQRHIGQVGAGRLTPGSYSSLDDASDKMDGAR
TVNGRLRTKQPLTTATSVSQVDSRGRTRTKMVSQSQRSDESDCTPGSQSATPIGAGSRSG
SPGRVLTSTALSTLGSGAQRVLAGAGGRRSRIPRSQGCSRDSSPTRLSVAPSSISSIYNG
ASRGARGSRIPRPSMSQGCSREASRESSRDTSPVRSFTPLASRHYSRSTGALHTADALGA
TGSGYSISQSSRLSSSVSAMRILNTGSDVEEALADALLLGDMRSKKKPARRRYENYGMYS
DDDANSDASSACSERSYSSRNGGAIPTYMRQTEDVAEVLNRCASANWSERKEGLLGLQAL
LKNQRTLSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFVLVHREDLQDWLFVLLTQL
LKKMGADLLGSVQAKVQRALDITRESFPNDLQFTILMRFTVDQTQTPNLKVKVAVLKYIE
TLTLQMEPQDFVNSSETRLAVSRVITWTTEPKSSDVRKAAQSVLISLFQLNTPEFTMLLA
ALPKTFQDGATKLLQNHLRNTGNAAQAPTGSPLTRHTPRSPASWSSPLTSPTNTSQNTSS
PSAFDYDTENMNSEDIYSSLRGVTEAIQNFSVRSQEDMNEPVRRREGEEGGSASADQVDG
GRTALDNKTSLLNTPLLSSSPRGSRDPFTDSPFKHSVIDTSLDESDQQTDDSSIDQSELV
SELLKELSNHNERVEERKAALCELLKLIRENTLQVSWDEHFKTILLLLLETLGDREHVIR
ALALRVLREILSRQPWRFKNYAELTIMKALEAHKDPHKEVVRAAEETAAMLASSISPDQC
IKVLCPIIQSADYPINLAAIKMQTKVIERVPHEGLVSMLPEIVPGLIQGYDNSESSVRKA
CVFCLVALYAVIGEELKPHLNQLSGSKLKLLNLYIKRAQSGSSGGEPPADSL
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacatgacaacatggattatttttaccagcaggtcctgcagaaagacgttacc
cgcaggctgcaggtcgggcaggacttcatagactacctgaacgacccgcagaggtccacc
gatgtggagcaagacaaaccacggctggataaaactgtagatgagctgacgggatgggtc
aactccagcaactacaaggtggcgttgttggggatagacattgccggggcgtttgtcgat
cgcttgggggagcgcttcagaggatacctgggaacagtggtccctgcgttagtggaccgg
ttgggggacagtaaggaccaggtcagagaacagagtcagacagtcatcctccgctgtatg
gaagtcacagcatcgcctatgtatgtgtgggagaggttgcttcctggttttaaacataag
aatttccgcagcagagagggcgtgtgtctggttctctgcgccaccctcaacatgtatggt
gctcagcctttgagtctcagtaagatcgttccgtacctctgcactctgacaggagatcag
aacccacaggtgcgtgaggctgccacagcatcgctggtggatgtgtatcgccacatagga
gagagagtcagagccgaccttggaaagagaggcctgcctgccacacggttacagacaata
tacgggcgttttgatgaagcgttgaattctgggaacatggcgctcagccccagtcacgtc
tcacagatttctatcgtattgcgtccatctccgaaaagaagacaaccaaggagaatcatc
cttcgtcataaccatagttttgaggatgatgtggacagtacagatgggagccgtgctcag
gctgccttcaaagtccccaaaatccccaagaagcctgcagagtcctctaccgcacgcaga
cccagcgctacaggacccaagatcggaggtgcgtctaaggatggagctgggggcatcgat
gaggaagacttcatcaaagccttcactgacgtccccacagtacagatctactcgtctcgt
gacctggaggataacctgaataagatcagagagatctgttctgatgacaaacatgactgg
gaccagagagccgctgcaatgaagaagatccgctccctgattgttgccggggcaacggag
tacgagtgtttcttccaacacctgaggctgttggacggagcgttcaaactgtcagctaaa
gacctccgatcacaggtggtacgagaggcctgcatcactgtggcccacctgtcgacagtg
ttgggtaataagtttgaccatggtgctgagggcattcttcctatcctgttcaacctcatc
cctaactgtgccaaggttatggccacttcaggggtgtctgctatacgcttcatcatacgg
cacacacatgttcccagactcattcccctgatcaccagtaactgcacctgcaagtctgtg
gccgtcagaaggaaatgttttgacttcttggacctgctgctgcaggagtggcagacccag
actctggagagacatacagcagtgatggtagcgagcattaagaaggggattgcagatgcc
gacgcagaggccagagtagaggcccgcaaggcgtactggggtctgaggaaccattttccg
ggagaggcggattctctgttcaactcgttagaaccgtcttatcagaggagcctccagtcg
tctctcaggaatgccgggagcgtggcgtctcttcctcagagtgaccgctcctcttcctct
tcacaggagagcctcaatcgtcctctgtcgtctaaatggtcagctgctcctggtagagtc
ccggctggtcataagggcggggcgtcgccaggctccctgcagcgttcccgtagcgatgtg
gatgttaatgcagcaacggttgctaagcagcggcacatcgggcaggtgggggcggggaga
ctgacccccggctcctactcgtcattggatgatgcctctgataaaatggatggggccagg
acagtcaatggtcgtctgaggaccaagcagcctctcaccacggcgaccagcgtcagccag
gtggactcccggggacgtacccgcaccaagatggtgtcccagtcgcaacgttccgacgaa
tcagattgcacgccaggatctcagtctgctacccccattggtgccggcagtcggagtggt
tccccgggtcgcgtcctgaccagtaccgctctgagtactctgggttctggagcccagagg
gtcctagctggggctggagggaggcgtagccgcatcccccgcagccagggctgctcacga
gactcctcccctacacgcctgtctgtcgcgccctccagtattagttccatctacaacggc
gcaagcagaggagctcggggcagtcgtatcccccggcccagtatgagtcagggctgcagc
agggaggccagcagagagagcagcagagacaccagccctgtacgctcctttacacccctg
gcgtcgcggcactactctcgctccactggagctctccataccgccgacgctttaggggcc
acagggtcagggtacagtatcagtcagtccagtcgtctgtcctcatccgtcagcgccatg
agaatcctcaacacaggatctgatgtagaagaggccctcgctgatgccctgctgttggga
gacatgagatccaagaagaagccagcgcggcggcgctatgagaactatgggatgtattcg
gatgatgatgctaacagtgacgcgtccagcgcctgctcagagcgctcctacagctccagg
aatggaggagccatccctacgtacatgagacagactgaggacgtggccgaggtgttgaac
cgctgtgccagtgccaattggtcggagaggaaggagggactgctgggtctacaggctcta
ctgaagaaccaacgcaccctcagtcgtgtggagttgaagaggttgtgcgagatcttcacc
agaatgtttgcagacccccatagtaaggtgttcagtatgttcttagagaccctagtggac
tttgtcctggtgcacagagaagacctgcaggactggctgtttgtcctgctcacccagctg
ctgaagaagatgggagctgacctgctgggatcagtacaggccaaggtccagagagcactg
gacatcacacgagagtctttccccaacgacctccagttcactatccttatgaggttcact
gtggaccagactcagacaccaaacctcaaggtgaaggtggctgttctgaagtacattgag
acattgaccctgcagatggagccgcaggactttgtgaactccagtgagacgcgcctggct
gtgtcacgcgtcatcacctggaccacagagcccaagagctccgacgtcaggaaggctgcc
cagtcggtgttgatctcgttgttccagttgaacactccagagttcaccatgctgctggca
gctctgcccaagaccttccaggatggcgccaccaaattgctacagaaccacctgaggaac
acaggcaatgctgcacaggccccgacaggaagccctcttacacgccacacaccccgctct
cctgccagctggtccagccccctcacctctcctaccaacacatcacagaacacatcctca
cccagtgcatttgactacgacacagagaacatgaactcagaggacatctacagtagtctg
agaggagtcacagaggccatccagaacttctccgtccgtagccaggaagacatgaacgaa
ccggtcagacggagggaaggagaggagggtggtagtgctagtgctgaccaggtggatgga
ggtcgtacagctctggacaacaagacgtctctcctcaacacccccctgctctcctcttct
ccccgggggtcccgtgaccccttcactgactcccccttcaaacacagcgtcatagatact
tcactagacgaatcagaccagcaaactgacgacagcagcattgaccaatcagagctggtg
tcagagctgctgaaggagctgtccaatcacaatgagcgtgtggaggagaggaaggcagcg
ctttgtgagctcttgaagctgattcgagaaaacaccctgcaggtctcctgggatgaacac
ttcaaaaccatcctcctgttactactggagacgctgggggacagagagcatgtgatcagg
gcgttagctctgcgtgttctgagggagattctgagccgccagccctggaggtttaagaac
tacgctgaactcaccatcatgaaggccctggaggcgcacaaggacccacacaaagaggtg
gtgcgagcggcagaggagactgcagccatgctggcgtcatccatcagtccagaccagtgt
atcaaggtgttgtgtcccatcatccagtcagctgactaccccatcaacctggctgccatc
aagatgcagactaaagttatagagagggtcccccatgaaggactagtcagcatgctgcct
gagatagtccccggactcatacagggttatgacaactctgagagcagtgtgaggaaggcc
tgtgtattctgtctggtggccctctacgcagtcataggggaggagctaaaacctcacctc
aaccaactgtctggcagcaaattgaagttgttgaatctgtacatcaagcgtgcccagtcc
ggctccagtggtggtgagcccccagcagacagcctatag
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integrated database retrieval system
