Oncorhynchus keta (chum salmon): 118399010
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Entry
118399010 CDS
T09424
Name
(RefSeq) zinc finger protein 40-like isoform X1
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118399010
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
118399010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
NOA36
zf-C2H2_jaz
zf-C2H2_16
Motif
Other DBs
NCBI-GeneID:
118399010
NCBI-ProteinID:
XP_052328718
LinkDB
All DBs
Position
20:36459018..36528112
Genome browser
AA seq
2607 aa
AA seq
DB search
MESDFSSLAERNTRVPVTSVGKPSQTLSAQFISELNAMPAVHFGLQTQPGHMQTYFVNKQ
ESYTTMQASTQATALQNSQHATQYFSNREKPVLQMSFSTGLSAARTHTPIPSGSNSLPKS
QPPVVHTCQSLSASVPSTIQVPVTPGYNPVHMATVVNFGLEQMCSSSPKHQKPKKQGKYV
CEYCSRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAHAIKLGLVAR
SDSGSGSLSVESDKAPGTHSDVEESGDSDEESSTADLDPDSSQGSVAAFSESSLQSAGTT
QGNHGDAGDLSAVFETLKPTTSQRSYESKGTAGLPKVVVYPVNVSPQRADSPRVADCTPE
QATAQRQRDFQTAHLRSSITVLSSLKEVDCTISLQDARSEDEDQQCRSPPGGGHGLLQRQ
QATDFSQQQQGKCLLSPRSLGSTDSGYFSRSESADQAMSPPSPFVKLTPPTGMDVTKNAL
PNLPAVVATVMNVASVEKPHVVQGQMRPPLVTKALSLEERISKLISDNEAVVDDKQLDSV
KPRRTSLSRRGSIDSPKSYIFKDSFQFDLKPMARRSSSSSDIPKSPFTPTENSKSVLLLS
VPNQYPPMDCLPITRSNSMPTTPGHTGLPPNVTQQPHILRICQSFDEKMSSLNDDVFSSA
PSTPNPAIHSRTLVRQVAVEHFSTSEVLTSVRSMDEGYHGSSVSTVTMQRSRSFEHAQDP
NRKPLQSKGTMYECETCRNRYRKLENFENHKKFYCSELHGPKNKLMSVRETELDVFQRGM
QQPLVPRTTGISGIMDQQQSIRKRRKMKSVGDDDDQSPTDTNPPCSVSFDSCQLSTASSG
RTFSQHSIMVDLLPKSNPPQIPQIQLIAGVTDATESRLSPIRETQVNTSGKERGDLQRQG
SGTSVIRHTNSLSRPNSFEISESIDRASPVDFLDKDGHSAGKTKEDATANLSLESYHEKM
SIPKCANQGGMENRVDRTLAAVAESCAAVQQSRLVRQNNIPEILVTEEPDRVHDGHSTEQ
GEKAADTFNWPQRSESLSKLPTEKLPPKKKRIRLAQMEHSSGESSFESSLSRSLSRDSSL
SRCSSVSASFDWDEPFRSESPSRGECANKICELQGLPIAFNTLGVPGMMRRAASEQISCT
QPSVEISCDYRSKSFDCGSGSPCRSLPPNRSMSPMELRKSAQTSSSPHVPLIERRRGPLV
RQMSLKIGPESQQHVGNHAIAVQRLPTVISISQQRPQQMQQTANNPPIAQTFILHSGETL
LQHNEKMVQSINLGSQSQLPQVHGLPHPWHLTSRVQTCQNSQQSAVNVMISQEDAQSKSA
DCQDKKGFVPKYQLRCPALRSSKTHSSTQGTQTTMPVLTIPIANRMQSVSKSSDVLHNVY
VAQPCHQIVGNKTQSIVLPLGLQNIQPSQNQPRAPQLPQILITHELMHPSPSVASKGSLY
NLHVVDTDTKTVPDMNKDRPPASAGLQVKHSLVSNTQNHFGETQIAPSLGSLHCTQKMAA
VTLCPQQEPIASSKRMLSPANSLDIAMEKHQKRAKDEHGAACLTDGRSVNYLNSNMAEVT
RQRKLMLVRQVCATESADSPIETVAPPLQHEKPEDEKYARTPNNRKTTTPESTGQDEPST
VVAQLQPSFALTTSLGSHVSSVPANDCLKPQDKSEEQKLPPAKSPIRPLTFHGQVKLASS
VSVVNTRDSHRLSFPSLKTTTTFTWCYLMKRKPLHVPQMDQKISAYSTWAVSPNNPHPLG
LPTKVVMSLFNSKQNSKKIHYTEAITTCMKSDILAYSSKLKDVMPKVLKQQKSLTTENNS
KVKPETQVSSESDKDSSASKLEPRRVKIFDGGFKSNEEYVYVRGRGRGKYICEECGIRCK
KPSMLRKHIHTHSDVRPYHCTHCNFSFKTKGNLTKHMKSKAHSKKCMEMGVEDQDTEDSD
RSQVGSTDRPDSDGEDSEGADDDNEDDNEEEEDDSQAESGLSTNPSVSASPQHIPSSLQA
ELPPSSLLAQLSIHHHPASLSLPQPPSSDCHTHDASDTESVPMLSPVSLVKQMSISGGCS
SPLPYSPPPHTSGTESVTMMSPVSPCRQMSIDYPDFDVPPCPPAQGKSCSKLGQDGTLAL
SVSDPGVPVGTDVSTQTSYSLQASSYSPLHFPSQRPTQGPGATQGTNTHLFSHLPLHSQQ
PSHSPYSMVPVRGIQLVPASLAAYSTFVPIQAGPVQLTIPAVSVIHRKTSPLPFPNTSNS
PEPDGMVNPSSPVNQPLVVQEPIGSIMPCFPLGQVAGLGQVAGLGQVAGLGQVAGLPALR
ASHHTLQSMGLETLTLTSSEGLTSTQLLSQHGLSLNATLGLQVLAHTSTSQSRTVPHHHT
HIPGLQILNIAVPTLIPSLSPLSGLSPLAGPFERQGSPNAPAAPRTPQPSSQTETEPSVS
CLSAASPPTATLRGSLAQELASSCSRSSRSGPGGSGGSRGSDDTQTSEKKERVTTSLAPP
ASAPALAPALALAPAPGSAPALAPAPGSAPALAPAPGSAPALAPAPGSAPALAPAPALAL
APAPGSAPAPGSALAPAPALALAPAPAPAPAPAPDRCLEGDKNPPAEGASEPVTPRRQSM
LSRQQETEDYNDDSASSDDEDRLVIAT
NT seq
7824 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagatttcagctccttggcagaaagaaacacacgtgttccagtcacatctgtt
ggaaaaccaagtcaaactctttctgcccagtttattagtgaattgaatgctatgccagct
gtacattttggactccaaactcagcctggccatatgcaaacttactttgtaaataaacaa
gagagctacaccaccatgcaggcctctacccaggctactgccttgcagaattcacagcat
gctacacagtatttcagcaaccgggaaaagcctgttctacaaatgagcttcagtactggg
ctctctgctgcccgtactcatacacctattccatctggctccaattccttacccaagagc
cagccaccggtggtccacacatgccagtccctatctgccagtgtccccagtaccattcaa
gtccctgttacacctggttacaacccagtccatatggccacagttgtaaactttggtctt
gaacagatgtgtagcagctccccaaagcaccagaagcctaagaagcaggggaagtatgtg
tgtgaatactgcagtcgggcatgtgcaaagcctagtgtgctcctcaagcacatcaggtcc
cacacaggagaacgtccctacccatgtgttacatgtggcttctcattcaagaccaagagc
aatctgtacaagcataagaaatcccatgctcacgcaataaaactggggcttgtggcacgt
tccgactctggaagtgggtccctctctgtggagtctgacaaagcacccggaacacattca
gatgtagaggaaagcggggacagtgacgaggaaagtagcacagcggacctggaccctgac
tcgtcacaaggcagcgttgcagcgttctctgagagcagtttgcagagtgcaggcacaaca
caaggcaaccatggggatgcaggggacctatcggctgttttcgaaacgcttaaaccaacg
acgagtcagaggagctacgagtccaaagggacagctggcctcccgaaagtagtcgtctat
cctgttaatgtctcgcctcagcgggcggacagtccaagagtcgcagactgtacccctgag
caggctactgcccaaaggcaaagggacttccaaacggcacatctaagatccagcatcacc
gtcctgtcctccttgaaagaggtggattgcacaatctccctgcaggatgcaagaagtgag
gatgaggatcaacagtgtaggtccccaccaggaggcggacatggtctgcttcaaaggcag
caggccacagacttttctcagcagcagcagggcaagtgtctgcttagtccccgcagttta
ggcagcacagactctgggtatttctcacgttctgaaagcgcagaccaggccatgagtccc
ccgagtccctttgtaaagctaaccccaccaacaggcatggatgtcaccaaaaatgcactt
cctaatctccctgcagtggttgccactgttatgaatgtggcttccgtggagaagccacat
gttgtgcaaggacaaatgcgtccaccattagtaacaaaagcactctctctcgaagagcgg
atctcaaagttaatatcagacaatgaggcagtggttgacgacaaacagctggacagtgtc
aaaccaagaaggacttctctttccaggagaggtagcatagactcccccaaatcttatata
tttaaagactcttttcagtttgaccttaaaccaatggcgagaaggtcaagttccagctca
gacatacccaagtccccattcacccctacagaaaactctaagtcagtattgctattgtct
gttcctaatcagtatccaccgatggactgtttaccaataacaagaagtaattctatgccc
acaacaccagggcacacgggtctcccaccaaacgttacccaacaaccccacatactacgg
atctgccagtcttttgatgaaaaaatgagttccttaaacgatgatgtgttttcatctgct
ccctcgaccccaaatccagcgatacattctcgtacccttgtacggcaagtagcagtggaa
catttctccacaagtgaggtccttacatcagtccgttccatggatgaaggttaccatggt
tctagcgtttccactgtgacaatgcaaaggagcaggtcttttgagcatgcacaagaccca
aaccgaaagcctctgcagagcaaaggcacaatgtatgagtgtgagacctgtcgtaaccgg
taccgaaaactagaaaactttgaaaatcacaagaaattctattgttcagaacttcatggt
ccgaaaaacaagctgatgtctgtcagagagactgagctggatgtttttcagcgtggcatg
cagcagccattagtccccagaacaacaggtatttcaggcataatggaccaacagcaatca
attagaaaaagaaggaaaatgaagagtgttggtgacgatgatgaccaatcaccaactgac
accaatcccccatgctctgttagttttgattcttgccaactatcaacagccagttcaggt
aggacattttctcagcactctatcatggttgatctactgcctaaaagcaacccaccacaa
atacctcaaatacagctaatagcaggagttacagatgcaacagaatcaagactgtcaccg
atcagagaaacccaggttaacacctctggtaaagaaagaggcgacctacagaggcaaggc
agtggtacatcagttatcagacataccaactctctgagcaggcccaattcatttgagatc
tctgaatctattgacagagcctctccagttgatttcctggacaaagatggccatagcgca
ggaaaaactaaggaagatgctacagccaatctttcattagagagctatcatgaaaagatg
tccatacctaaatgtgccaaccagggagggatggaaaaccgtgttgaccgcacattagca
gcagtggctgagagctgcgctgctgtccagcagtctcgcctggttcgccaaaacaacatt
cctgaaatcctggtcacagaggaacctgatcgggtgcatgacggtcatagcactgagcaa
ggggaaaaggctgcagatacattcaactggccccagaggagcgagagcctgtccaagcta
cccacagagaagcttccacccaagaagaagagaatccgtctggctcagatggagcactcc
tctggagaatccagcttcgagtcctcactgtctcgaagcctcagcagggacagtagcctg
tcaagatgttccagcgtatcagcctccttcgactgggacgagccattcaggtccgagagc
ccctccagaggagaatgtgccaacaaaatctgtgagcttcaagggctaccaatagccttc
aacaccctaggggtccctggcatgatgagacgtgctgcctcagaacagatcagttgcact
caaccctcagtggagatatcttgcgactatcgcagcaagtcctttgactgtggcagtggg
tctccctgcaggtctctgccacccaacaggtcaatgtcaccaatggaactgcgaaagagt
gctcaaacctcctcgtctccgcatgtacctctcattgaaaggcgaaggggaccactggtt
cgccagatgtctttaaagattgggccggagagtcagcaacatgttgggaatcatgccatc
gctgtccagaggctccccactgtaatctctatatctcagcagaggcctcaacagatgcaa
cagactgccaacaatcctcccattgcccaaacttttattttgcattctggagaaactctc
ctgcagcacaatgaaaaaatggtgcaaagcattaacctgggcagccaaagtcaactgcct
caagttcatggtcttccacacccttggcacctaacatcgagggttcagacatgccaaaat
agtcagcaatctgcagttaatgtcatgatcagccaagaagatgcccagagcaagtctgct
gactgtcaagacaagaaaggctttgtacccaagtaccaactgcggtgtcctgctctgaga
tcaagcaaaacacactcttccacacagggtactcagacaaccatgcccgtcttgacaata
ccgattgccaaccggatgcaaagtgtgtcaaagtcttcagatgttctccacaatgtctat
gtggcacaaccgtgtcatcagattgtagggaataagacacagtcgatagtattgccttta
ggcctacaaaacatccaaccttctcaaaaccaaccacgtgctccccaattgccacagatc
ctgataacccatgagctgatgcacccttccccctctgtggccagtaaaggcagcctctac
aaccttcatgttgtagatacggacacaaagactgtaccagatatgaacaaggacaggcct
ccagcatctgctggccttcaagtaaaacacagtttagtttccaatacccagaaccatttt
ggtgaaactcaaatagctccctccctgggctccttacactgcacccagaaaatggcagct
gtgaccctctgtccacaacaggagcccattgcctcaagcaagagaatgctctcccctgcc
aatagcttggacatcgccatggaaaaacatcagaagcgagcaaaggatgaacatggtgcg
gcatgcctcactgacggcaggtccgtcaactacctgaactccaacatggcagaggtgact
aggcaacggaagctaatgctagtccggcaggtgtgcgccactgaatcagcagacagtccc
attgaaactgtggctcccccactgcaacacgagaaaccagaggatgaaaagtatgcccgg
actcctaataaccgcaagactacgacacctgaaagcaccggacaggatgaaccatctact
gtagttgctcaattacagccaagctttgcattaaccacctctctaggaagtcacgtctcc
tccgtgccagcgaacgactgcctgaagcctcaagacaagagcgaggaacagaaattgccc
cctgccaagtctcccattagacccttgactttccatggacaggtgaaacttgcctcatct
gtatctgtggtcaacacacgagacagccaccgcctgtctttccccagcctgaaaactacc
accaccttcacctggtgttacctgatgaagaggaagcctctgcatgttccccagatggac
cagaagatctcggcctactccacctgggcagtgagccccaacaacccccacccactgggt
ctgcccaccaaggtggtgatgtctctcttcaactccaagcagaactcaaagaaaatacac
tacacagaggccataacaacatgtatgaaatcagacatcttggcctattcaagcaagctg
aaagacgtcatgccgaaggtcctaaagcagcagaagtctctaacaactgagaataacagc
aaagtgaaacctgagactcaggtgagcagtgaatcagacaaggattcttccgcatccaaa
ctagagccacggagagtcaagatatttgatggaggattcaaatctaacgaagagtatgtg
tacgtgcgcgggcggggtcgtggtaaatacatctgtgaggagtgtgggatccgttgcaag
aagcccagcatgctgcgtaaacacatccacacccactctgacgtacgaccctaccactgc
acccactgcaacttctccttcaagactaaagggaatctgaccaagcatatgaagtccaag
gcacacagtaagaagtgtatggagatgggtgtggaggaccaggatacagaagactcggac
cgtagccaggtgggcagtacagaccgcccagattcagacggagaggactccgaaggtgct
gatgatgacaacgaagatgataatgaggaagaggaggatgacagccaggctgagtcgggc
ctgtccaccaacccctcggtctcagccagcccccagcacatcccctcctccctccaggct
gagctccctcccagctcccttctggcccagttgtccatccaccaccacccagcttccctg
tcactcccccagcccccttcctccgactgccacacccacgatgcctcagatacagaatcc
gtgcccatgctgagccccgtctccctggtcaaacagatgtcaatctccggaggctgctcc
agccccttgccctactccccgcccccccacacatctggcacagagtcggtgaccatgatg
agccctgtctcgccgtgcaggcagatgtccatcgattaccctgactttgatgtgccccct
tgtccccccgcacagggcaagagctgctccaagctcggccaggatggcactttggccctg
tcagtgagtgacccaggtgtccctgtcgggacagatgtcagcacccagacctcctatagc
ctccaggcatcctcctacagccccttgcactttccttcccagcgcccgacccaaggacca
ggggccacacaggggaccaacacccacctcttcagccacttgcctctgcactcccagcag
ccctcacactccccctacagcatggtccccgtgaggggcatccagctggttcccgctagc
ctggcagcctattccaccttcgtgcccatccaggctggccctgtccagctcaccatcccc
gccgtgagcgtcatccaccggaaaaccagccccctcccattccccaacacctctaactcc
cctgagcccgatggtatggtgaatccctcatcccccgtcaaccagcctctggtggtccag
gagccaatcggtagtatcatgccctgcttcccccttgggcaggtggctgggctggggcag
gtggctgggctggggcaggtggctgggctggggcaggtggctggtctaccggccctcagg
gcctcccaccacacgctgcagtccatgggtctggagactctgaccctgaccagctcagaa
ggcctgacctccacccagctgctatcccaacatggcctgtcgctcaatgccaccttgggc
ctgcaggtcctggctcacacctccacctcccagagcaggacagtcccccaccaccacacc
cacatccccggcctgcagatcctcaacatcgccgttcccaccctcatcccctccctcagt
cccctctccggcctcagtcccctcgcgggaccctttgagaggcagggcagccccaatgcc
ccagcagccccacggaccccacagccctcctctcagactgaaaccgaaccctcagtcagc
tgtctgtctgctgcttcccctcccaccgccaccctgaggggaagtctcgcacaggaattg
gcatcatcatgcagcagatccagcagatcggggccggggggttctggaggttccagaggc
tccgatgacacacagacttcagaaaagaaagagagggtaacaacatcgctagcaccgccc
gcctcagctccagctctagctccagctctagctctagctccagctccaggctcagctcca
gctctagctccagctccaggctcagctccagctctagctccagctccaggctcagctcca
gctctagctccagctccaggctcagctccagctctagctccagctccagctctagctcta
gcaccagctccaggctcagctccagctccaggctcagctttagctccagctccagctcta
gctctagcaccagctccagctccagccccagctccagcccctgacaggtgcctggagggg
gataagaatcctccagcagagggagccagtgaacctgtcacgcctcggaggcagtcgatg
ctctcacgacagcaggaaacggaagactacaatgatgactcagcatccagcgatgatgag
gacagactggtcatcgccacctga
DBGET
integrated database retrieval system
