Oncorhynchus keta (chum salmon): 118399116
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Entry
118399116 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118399116
04121 Ubiquitin system [BR:
oke04121
]
118399116
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118399116
Membrane trafficking [BR:
oke04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
118399116
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118399116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
Zn_ribbon_19
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
HypA
C1_2
U-box_ZFPL1
zf-HC5HC2H
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
118399116
NCBI-ProteinID:
XP_035650812
LinkDB
All DBs
Position
20:complement(1047364..1055796)
Genome browser
AA seq
303 aa
AA seq
DB search
MAEAAAAPQNRFFCHCCKGEIDPKLPEFTCPRCESDFIEEVTEDSSLLENSSTAEANDDA
GTLFSELWQLLFMEHSALLSDPSTSESESDQSHLQAAAVEGDVEGPSEVPVASVGGTDPL
VPEPERPSRPPSQGRRQSHTPAVEGIVQQFLAGLFANNGNPGIAPAALSGMLHSNPGDYA
WGQGGLDAVITELLGQFEGTGPPPAEKEMISSLPTVNVSQEQTDSRLECPVCREEYSMGE
SVKQLPCLHYFHSDCIVPWLELHDTCPVCRKSLDGVDQSIQPPPEPPETLSIRTDPQEER
QAI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggcggcaccacaaaaccgttttttctgtcactgttgtaaaggtgaa
atcgaccctaaactcccggaattcacatgccccaggtgtgagtccgatttcattgaggag
gtgacagaagactccagtctcttggagaacagcagcactgcagaggccaatgatgatgca
ggcacactcttttcagagctgtggcagctgttgtttatggaacactctgctcttctctcg
gacccctccacctctgagtctgagtctgaccagagccatctacaggctgccgcagtggag
ggagacgtagagggcccttctgaagtgcctgtggcctctgtgggaggcacagatccttta
gtgcctgaacctgaacgcccctctcgtcctcctagccaggggaggcgacagtcccacacg
ccagcagtggagggtattgtgcagcagtttttggctggtctgtttgccaacaatggaaat
ccaggcatcgcaccagctgcactgtctggcatgctccattcaaatccaggggactatgcc
tggggtcagggaggtctagacgcagttatcacagagttgttaggtcagtttgagggcaca
ggtccacctcctgcagagaaggagatgatctcatccctccccacagtcaacgtctctcaa
gaacagacagatagcagactggagtgtccagtatgtagggaggagtactccatgggagag
tctgtcaaacagctgccctgcctccattatttccacagtgactgcatagtgccatggctt
gaactgcacgatacctgtcctgtgtgtcgtaaaagtcttgacggcgtcgaccagagcatc
cagcccccaccagaacccccagagaccctctccatcaggacagaccctcaggaggagaga
caggctatttga
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