Oncorhynchus keta (chum salmon): 118399216
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Entry
118399216 CDS
T09424
Name
(RefSeq) LLGL scribble cell polarity complex component 2-like isoform X1
KO
K06094
lethal(2) giant larvae protein
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118399216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118399216
Membrane trafficking [BR:
oke04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118399216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
PLN_propep
Motif
Other DBs
NCBI-GeneID:
118399216
NCBI-ProteinID:
XP_035651008
LinkDB
All DBs
Position
24:33604695..33630197
Genome browser
AA seq
1011 aa
AA seq
DB search
MKRFRRHGQESQRERIKQELYGFNKTVEHGFPHQPSALGFSPSLQLLAIGTRSGAIKLYG
GPGVEFMGLHDENAAVTQVHFLPHQVELVTLLDDNSLHMWTLRAHHGVSELLEIGRFTLT
GPPGAPPSVTRVTAVLAHSSGDLLLLGTEGGHVFIVKVPGFRELEERNISLEKVTNGVPE
EYGGRRSLEHVESLQENPVNPRQVLIGYGRGLMVIWDLDSQSAVKHIPATQQLESVWWTE
DGGHVLSSHSDGSYCRWKVAGDDPQSEQEKSEVPYGHFPCKAISKIIQLPTEQGPPFLFL
SGGMPRASYGDRHCISVIHSKTHVALDFTSRIIDFFVIRDGPDHTGEPSALVVLVEEELV
VIDLQTEGWPVIQTPYLVPLHCSAITCSHHVSAIPLKLWERVLSAGALQNTHYSKKPWPM
TGGQNLAPDPPQRDLLLTGHEDGTVRFWDASGVCLYPMYKLSTAGVFLTDSDPNDNLNQG
TEGEWPPFRKVGCFDPYSDDPRLGIQKIHLCKYSGYLTVAGTAGQILVLELNDEAAEQTV
EATVADLLQGQEGFRWKGHTRLEVREEPVTFPPGFQPFALVQCQPPAVITALTLHSEWKL
VTFGTSHGFGLYDYQQKNNVLVRCTLNPSDQLAMEGPLSRVKSIKKSLRQSFRRIRRSRV
SLRKHHVNNAAKLQQANARLEAELAEMELAPVQRKIEPRSPDDSFTGLVRTLYFADTFLS
DSSHNTPSLWAGTNGGSVFAYQLRLPPVERRGEDPVTAHPAKEIQLMHRAPVVGILVLDG
HGSPLPEPLEVAHDLARSPDMQGSHSLLVISEEQFKVFTLPKVSAKMKLKLTAIDGSRVR
RVGVAWFGSTRTDDYGESGLTVLTNQGDLHVVSLPGVKLQVQYPCIRREDVSGIASCVFT
KHGQGFYLISPSEFERFSLSARCVVEPRSLVEVSSQTPSTTLPRALPDGASVERRNSTRD
GVESSARRVMEHALLNDETVLQEIQKSLEVDQTTFLENGTSALAGGKVLSN
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtttaggagacatggccaggagtcccaaagagagcggatcaaacaggagctc
tacgggttcaataagacagtggagcatggttttcctcaccagcccagtgccctgggcttc
agccccagtctacagctcctggccatcggcacacgttccggagccatcaaactttacggt
ggcccaggtgtggagttcatgggtctacacgatgagaacgctgccgtcacacaggtccac
ttcctgccacaccaggtggagctggtgactctgttggatgacaacagtctccacatgtgg
accctcagagctcaccatggtgtctctgagctgctggagataggacgcttcacactcact
ggacccccgggtgctccccccagtgtaactcgtgtaacagcggtgctagcccactcttct
ggggacctgctgttgctaggaacagagggaggacacgtgttcatagtgaaggtaccaggc
ttcagagaactagaggagaggaacatcagcctggagaaagtcaccaacggtgtaccagag
gagtacggaggtcgtaggagcctggagcatgtcgagtccttacaggagaatcccgtcaac
ccacgccaggttctgattggatacggacgaggcctcatggtcatctgggacctagacagc
caatcagccgtcaaacacatccccgctacacagcaactggagagcgtgtggtggactgag
gacggtggccatgttctcagttcccatagcgacggcagctactgccgctggaaggtggct
ggggatgacccacagagcgagcaggagaagtctgaagtaccatacggccacttcccctgt
aaggccatctctaaaatcatccagctgccgacagaacaggggcctccgttcctgttcctc
agtggcggcatgccccgggccagctacggcgacagacactgtatcagtgtgatccacagt
aaaacacacgtggctctggatttcacctccagaatcatcgacttcttcgtcatcagagac
ggaccagaccatacaggcgaacccagtgcattggtggtcttagtagaagaggagttggta
gtgatagatctccagactgaagggtggccggtcatccagactccgtacctggtgcctctc
cactgctcggccatcacctgctcccaccatgtctctgctatacccctgaagctgtgggag
agggtcctgtctgccggagcattgcagaacacgcactactctaagaagccgtggcctatg
acaggaggacagaacctggccccagacccccctcagagagacttactgctcacagggcac
gaggacggtacggtgcgtttctgggacgcgtcgggggtgtgtctgtaccccatgtacaag
ctgagcacggcaggggtgttcctcactgactcggaccccaatgacaacctgaaccagggc
acagagggagagtggccacctttcagaaaggtgggttgttttgacccgtacagtgacgac
cctcgtctcggcattcagaagatccacctgtgtaaatacagcggctacctgactgtagct
ggcactgctggacagatcctggtgttagagctgaatgatgaggcagcagaacagactgtg
gaggccaccgtagcagacctgctacagggacaggagggcttccgctggaagggccacacg
cgtctggaggtgagggaggagccggtgacgttccccccagggttccagccctttgccctg
gtccagtgccagcctccggccgtgatcactgccctcaccctgcactctgagtggaaacta
gtaacattcgggaccagccacggcttcggactctacgactaccagcagaaaaacaacgtt
cttgtcaggtgtactctgaaccccagtgaccagctggctatggaaggtcctctgtccaga
gtgaagagcattaagaagtctctccgccagtccttcagaaggatcaggcgcagcagagtg
tccctacgcaaacaccatgtcaacaacgcagctaagttgcagcaggccaatgctcgtcta
gaggcggagctagctgagatggagttggcgcccgtccagagaaagatagagcctcgatcc
cctgatgactccttcaccggcctcgtgcgcacgctatacttcgctgataccttcctttca
gacagctcccacaacacaccctctctgtgggcagggaccaatgggggatcagtattcgcc
taccagctccgcctaccgcctgtggaacgcagaggagaggaccctgtcacagcacaccct
gctaaggagatccagttgatgcaccgtgctccagtagtgggcatcttggtgttggacggc
catggttcccctctgcctgagcccctggaggtggctcacgacctggcccgctcacctgac
atgcagggttcacacagcctactggtcatatcagaggaacagttcaaggtgttcaccctg
cctaaggtgagcgccaaaatgaagttgaagttgacggccattgacggctcacgcgtgcgc
cgggtgggcgtggcctggttcggcagcacccgcacggacgactacggcgagagcggcctc
accgtcctgaccaatcagggagacctccacgtggtgtcgttgccgggggtgaaattgcag
gtccagtacccctgtatacgtagggaggacgtcagcggcattgcatcctgcgtcttcacc
aagcatggacagggtttctacctgatctctccgtcagagtttgagcgtttctctctgtct
gctcgctgtgtggtggagccccggtctctagtggaggtgtcctcccagacacccagcacc
actctgccacgggcgctgccggacggggcctctgtggaacgcagaaattccacgagggat
ggcgtggagagctctgctagacgtgtgatggagcatgctttgctgaatgatgagactgtg
cttcaggagatccagaagtctctagaagtagatcagacgacgttcctggagaatgggacg
agtgctctcgctggagggaaggtgctgagcaattga
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