Oncorhynchus keta (chum salmon): 118399360
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Entry
118399360 CDS
T09424
Name
(RefSeq) GA-binding protein subunit beta-1-like isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118399360
03029 Mitochondrial biogenesis [BR:
oke03029
]
118399360
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
118399360
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
118399360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
TC1
Beta-prop_ELP1_1st
Glyco_hydro_3_C
Motif
Other DBs
NCBI-GeneID:
118399360
NCBI-ProteinID:
XP_035651277
LinkDB
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Position
20:complement(10698240..10709747)
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AA seq
437 aa
AA seq
DB search
MGHLISIYPGLARLIRLNSTSLQQQQKPVSSPEMSLVDLGKRLLEAARKGQDDEVRTLMA
NGAPFTTDWLGTSPLHLAAQHGHYSTAEVLLRAGVSRDARTKVDRTPLHMAASEGHNVIV
DLLVRSGADINAKDMLKMTALHWAAQNGHQRVAETLVKHGADVHALSKFDKTPFDIAGDI
QNADLMLLLQEGMQNQVNINAEAGMTGSSAQPQFIIQGIPGLPGGVVNLADLLNNINSAG
DSEEAIAANSLDPGSIQHMVNEQGQRVITIVTDQHGNLQTGGLGQPFFVTMQHGQQMLAM
PANQVTEEVVEEEPQPPPARKRKLEASANHMESGDTEQLQRQLQEANRKAQEYRQQLMCK
EQEAEQYRMKLEAMSHSHTNGTSEQEEVVEEEEEEEEEEVVVVLQEGDIIIKTEELDSAE
EQVTLVESVPSHTEVIS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgggacatctgataagcatatatccgggattggctcgactcattcgcctcaatagcacg
agtctgcagcaacaacaaaagcccgtttcttctccagagatgtcgctggtggatttgggg
aagcggctccttgaggctgcacggaaaggccaggacgatgaagtcaggacactcatggcc
aatggggctcccttcaccacagactggctgggcacatctccgttgcacctggccgcccaa
cacgggcactattccactgccgaggtgctactcagggcaggcgtcagcagggatgcccga
accaaagtggacaggacccctctgcacatggctgcttcagagggccacaatgtcatcgtg
gatctattagtcaggagtggcgcagacattaatgccaaggacatgctgaagatgactgct
ctccactgggccgcccagaatggccaccaaagggtagcggagacgctcgtgaaacatggc
gccgatgttcacgctctcagtaaatttgataagacgccgtttgacatcgcaggagacatc
cagaatgcagaccttatgctcctactacaggagggaatgcagaaccaggtgaacattaac
gcagaggctggcatgacggggagctcggcccagcctcagtttatcatccagggcatccca
gggctcccggggggtgtggtcaacctggcagacctcctcaacaacatcaactcggcaggt
gactcggaggaagccatagcagccaattctttggatcccggcagcatccagcacatggtg
aacgagcaaggtcaaagggttatcaccatagtgaccgaccaacacggtaacctacagact
ggagggcttggtcagccattctttgtcaccatgcagcatggacaacagatgttggcgatg
ccagccaatcaggtgacagaggaggtggttgaggaggaaccccagcccccgcctgcccgc
aagaggaaactagaggcctctgccaaccacatggagtctggagacacggagcagttacag
aggcagctgcaggaggccaaccggaaggcccaggagtaccggcagcagctgatgtgcaaa
gagcaggaagcagagcagtaccgtatgaagctggaggccatgtcgcacagccataccaac
ggcacctctgagcaggaggaagtggttgaggaggaggaggaggaggaggaggaggaggtg
gtggtggtgctccaggagggagacatcatcattaagacggaggagctggactcggccgag
gagcaggtgacgctggtggagtcggtgccctcccacaccgaggtcatctcataa
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