Oncorhynchus keta (chum salmon): 118399391
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Entry
118399391 CDS
T09424
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03010
Ribosome
oke04120
Ubiquitin mediated proteolysis
oke04137
Mitophagy - animal
oke04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
118399391
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118399391
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118399391
04137 Mitophagy - animal
118399391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
oke03011
]
118399391
04121 Ubiquitin system [BR:
oke04121
]
118399391
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118399391
Ribosome [BR:
oke03011
]
Ribosomal proteins
Eukaryotes
Small subunit
118399391
Archaea
118399391
Ubiquitin system [BR:
oke04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
118399391
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118399391
Exosomal proteins of colorectal cancer cells
118399391
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
IBR
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
118399391
NCBI-ProteinID:
XP_035651347
LinkDB
All DBs
Position
2:32017411..32022098
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPAEECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtcaaaaccctcacggggaagactataaccctcgaggttgagccttca
gacaccattgaaaatgtcaaggccaaaatccaagacaaagaaggtatccctcccgatcag
cagaggttgatctttgctggtaagcagctggaggatggacgcacactgtccgactacaac
attcagaaggagtccactctgcatttggtgctgagactccgtgggggtgccaaaaagagg
aagaagaagtcctacaccactcccaaaaagaacaagcacaagaggaagaaggtcaagctc
gcagtgctgaagtactacaaggttgatgaaaatggcaagatccaccgtctgcgtcgtgag
tgtccagctgaagagtgtggtgctggtgtgttcatggccagccacttcgataggcactat
tgtggcaagtgctgcctcacttactgcttcaacaagccagaggacaagtaa
DBGET
integrated database retrieval system
