Oncorhynchus keta (chum salmon): 118399450
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Entry
118399450 CDS
T09424
Name
(RefSeq) partitioning defective 6 homolog gamma-like
KO
K06093
partitioning defective protein 6
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
oke04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118399450
09144 Cellular community - eukaryotes
04530 Tight junction
118399450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118399450
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
118399450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
118399450
NCBI-ProteinID:
XP_035651440
LinkDB
All DBs
Position
20:14416223..14457010
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AA seq
446 aa
AA seq
DB search
MNRSFNKSQSSLQYFDCIAVEVKSKYGAEFRRFSVDRFKPGKFEDFYKLVMHVHRIANME
VMIGYADIHGDLLPINNDDNFCKAVSTAHPLLRVFIQRQEEVDYSSYGTHSLTRKKKAVV
ALRNDVNRKRPHIRIGMPQDFRPVSSIIDVDILPESHRRVRLYRHGSDKPLGFYIRDGTS
VRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVTGKTLDQVTDMMIAN
SHNLIVTVKPVNQRNNVVRASRISGSSGQSSDSSGSTGYPSLSTAAMATGAHGYPDELES
DEESDIVIESTLKRPSRRSSASMVSVASRTSRSHTQAPPQAPVEPTNPPIRPLSVVSTSS
SHSQPSLNGLSHHGSLSYMLHRDLNLQQPQLQNPQHHQTQHHSSNPALRESNSSLHKILS
TMRTDPRHSLALPRGGVEEDGTVITL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggagttttaataaatcccaatcttccctgcaatattttgattgcatcgcggtt
gaagtgaaaagcaagtacggagcagagttccggcggttctccgtggaccggttcaaaccg
gggaagttcgaggacttctataagctcgtcatgcacgttcaccgcatcgccaacatggag
gtcatgattggctacgctgacatccacggagacctgctgccaatcaacaacgacgacaac
ttctgcaaggcggtgtctacggcccaccctctgctccgggtcttcatacagagacaagag
gaggtcgactacagcagctatgggactcactctctgacccgaaagaagaaggctgtggtg
gcgctgcggaacgacgtcaacaggaagcgacctcacatccgtattggcatgccgcaggac
ttccggccagtctcctccatcatcgatgtggacatcttgccagagtcccaccgccgcgtt
cgtctctaccgccatggttctgacaaacccctggggttctacatccgggatgggacaagc
gtacgggtgacgccccatggcctggagaaggtgcctgggatttttatctcccgcatggtg
cctgggggcctggctgagagcacgggcctgctggccgtcaatgacgaggtcctggaggtc
aacggcattgaggtgactgggaagacgctagaccaggtaacggacatgatgatcgccaac
agtcacaacctgattgtcacagtgaagccggtgaaccagcggaacaatgtggtgcgagcc
agccggatatccggcagctccggtcagtcgtcagacagcagcggttccaccggctacccc
agcctgtccaccgcagcaatggcgaccggtgcccatggctaccccgacgagctggaaagc
gatgaggagtcagacatcgttatcgagagcaccctcaagcggccgtcgaggcgctccagc
gcatcaatggtgtccgtggcttcaagaacgtcacgctcccatacccaagcccctccccag
gcccccgtggaacccaccaaccccccgatccgacccctctctgtggtttccacctcctcc
tcccactcccagcccagcctcaatggcctttctcaccacggcagcctcagctacatgctg
cacagggacctgaacctccagcagccccagttacagaacccgcagcatcaccaaacccag
caccacagcagcaacccagccctccgggagagcaacagcagcctgcacaaaatcctcagc
accatgaggacggaccctcgacacagcctggctttgccccggggaggggtggaagaggat
ggcacagtcatcaccctataa
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