Oncorhynchus keta (chum salmon): 118399489
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Entry
118399489 CDS
T09424
Name
(RefSeq) replication protein A 32 kDa subunit-like isoform X1
KO
K10739
replication factor A2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03030
DNA replication
oke03420
Nucleotide excision repair
oke03430
Mismatch repair
oke03440
Homologous recombination
oke03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118399489
03420 Nucleotide excision repair
118399489
03430 Mismatch repair
118399489
03440 Homologous recombination
118399489
03460 Fanconi anemia pathway
118399489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oke03032
]
118399489
03400 DNA repair and recombination proteins [BR:
oke03400
]
118399489
DNA replication proteins [BR:
oke03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
118399489
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
118399489
MMR (mismatch excision repair)
118399489
DSBR (double strand breaks repair)
HR (homologous recombination)
118399489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
LexA_DNA_bind
Motif
Other DBs
NCBI-GeneID:
118399489
NCBI-ProteinID:
XP_035651502
LinkDB
All DBs
Position
20:complement(18000371..18004574)
Genome browser
AA seq
252 aa
AA seq
DB search
MCFYKVYNRGSYMGSGYRYNQSTGGFTTFQSGQKTTKWSVLQMMPCTVSQLLSATAVGEV
FRVGDIEVNQVSVLGIVRRTVPSVNNVLYSVDDMTGPPLGVKLWVNTADPGVDSTFVSPG
TYVKVSGSLRIIQGQRSLVAFNLCCLEDLNEITSHMLEVVQAHMQHNRNLCGGGNPGDGD
ASTYGLSASQSQVLNLIRSCSDSKPRGISLEELDIKLGYLSMTAISQTLEFLIREGHIFS
TIDDKHFRSTTG
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttttacaaagtatacaacaggggctcatatatgggaagtggatacaggtacaat
cagtccacaggtggatttaccaccttccagtcaggacagaagacaaccaagtggtcagta
cttcagatgatgccgtgcactgtgtcccaactgctgtctgccacggctgtcggggaagtc
ttcagagttggtgacattgaggtcaaccaggtatctgtgctgggtatcgtcaggagaacg
gttccctcagtaaacaatgtcttgtactccgtggacgacatgactggaccaccattaggt
gtgaagctctgggtgaacactgcagatcctggtgtggacagtacttttgtgtcgccaggg
acttatgtcaaggtctctggaagcctgcgtatcattcagggccaaagatcattggtggct
ttcaacctctgttgccttgaggacctgaatgagatcacctctcacatgctggaggtagtg
caggcccacatgcagcacaacaggaacctttgtggtggtggtaatcctggagatggagat
gcatcaacctacgggctgagtgccagtcagagccaggtgttgaacctgatccggagttgc
tcagactccaagcccaggggcatcagtctagaggagctagacattaagctggggtacctc
agcatgactgccatcagccagaccttggagtttcttatcagagaaggccacatcttctcc
accatcgacgacaagcatttcaggtccactactggctag
DBGET
integrated database retrieval system
