Oncorhynchus keta (chum salmon): 118399554
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Entry
118399554 CDS
T09424
Symbol
matn1
Name
(RefSeq) cartilage matrix protein isoform X1
KO
K19467
matrilin
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118399554 (matn1)
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
118399554 (matn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
VWA_3
cEGF
EGF_CA
EGF_3
EGF
Plasmod_Pvs28
hEGF
EGF_LRP2
BRISC_FAM175B_helical
Motif
Other DBs
NCBI-GeneID:
118399554
NCBI-ProteinID:
XP_035651616
LinkDB
All DBs
Position
20:complement(21919479..21932195)
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AA seq
494 aa
AA seq
DB search
MIPSPPLFLLLLGLMGAHATPPVSVDLRTAAAMAAGLCNTRPTDLVFIVDSSRSVRPSEF
EQVKVFLAKVIEGLDVGPDATRVGVVNYASRVKNELSLKTHKTKAGLVKAVTKIEPLSTG
TMTGLAIQFALNVAFSEAEGARVKSPDISKVAIIVTDGRPQDNVKDVAARARDAGIELYA
IGVGRVDLNTLKQIASEQLDDHVDYVESYSVIEKLTKKFQEAFCVADLCATGDHDCQQVC
ISAPGSFKCACKEGFSLLEDGKSCSACSNAATDVVFLIDGSKSVRPENFELVKKWINQIV
DKLDVSETKAHVGLVQYSSSVKQEFPLGRYNNKKDLKDAVKKMAYMERGTMTGQALRYLT
DSSFAPAGGARPGVAKVGIVFTDGRSQDYIGDAAKKAKEQGFRMYAVGVGNAVEDELREI
ASQPTGEHYFYTADFKAMTAIAKKLQINICQEEDPCECDSVVKFQKKVEEALQALTKKLE
GVSKRIAALENKIV
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgataccctctccgccattgttcctgttgctgctcggcctcatgggagcgcatgccacc
cctcccgtgtccgtggacctccgcaccgctgccgccatggcggcaggtctgtgtaacact
cgccctacagacctggtgttcatcgtggacagcagtaggagcgtgcgtccgtcagagttc
gagcaggtcaaggtgttcctggccaaggtcatcgagggactggatgttggacctgacgcc
acacgggtcggagtggtcaactatgccagccgcgtcaagaatgagctgtctctgaagacc
cataaaaccaaggcaggtctggtaaaggctgtgactaagattgagcccctgtccactggc
accatgaccggccttgctatccagttcgccctcaacgtagctttcagcgaggctgagggc
gcccgcgtcaagtccccagacatcagcaaggtggccatcattgtgacagacggtcgtccc
caggacaacgtaaaggatgtggcggcacgtgcccgggatgcgggtatcgagctatacgcc
attggcgtagggcgtgtagacctgaatacgctgaagcagatcgccagcgagcagctggac
gaccacgtggactacgtagagagctactcagtcatcgagaaactcaccaagaagttccag
gaggctttctgtgtggcggacctgtgtgccactggagatcatgactgtcagcaggtatgc
atcagcgcaccagggtcattcaagtgtgcctgcaaggagggcttcagtctactggaggat
ggcaaaagctgcagcgcctgcagtaatgccgccacagacgtggtgttcctgatcgatggt
tctaagagtgtgcgtccagagaactttgagctggtcaagaagtggatcaaccagatcgta
gacaaactggacgtctccgagaccaaggctcatgttggactggtccagtactccagctct
gtcaaacaggagttccctctgggacgttacaacaacaagaaagacctaaaggacgcagtg
aagaagatggcctacatggagagggggaccatgacaggacaggccctgcgctacctgacc
gacagcagctttgcaccagccggtggggcacggcccggggtggccaaggtcggcattgtg
ttcaccgatggacgtagccaggactacatcggagacgccgccaagaaggccaaggagcaa
ggttttaggatgtatgctgtgggcgtgggtaatgctgtagaggatgagttgagggagata
gcatcacagccaacaggagaacactacttctacactgcagactttaaagccatgacagcc
atcgctaagaagctgcagataaacatctgtcaagaggaggacccatgtgaatgtgactct
gtcgttaagttccagaaaaaagtagaagaagccttacaggcacttacgaaaaaactggag
ggcgtgtcgaagaggatcgctgcactggagaacaagattgtctga
DBGET
integrated database retrieval system
