Oncorhynchus keta (chum salmon): 118399646
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Entry
118399646 CDS
T09424
Name
(RefSeq) ribosome biogenesis protein bop1-like isoform X1
KO
K14824
ribosome biogenesis protein ERB1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oke03009
]
118399646
Ribosome biogenesis [BR:
oke03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
118399646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BOP1NT
WD40
ANAPC4_WD40
NBCH_WD40
ICA69
Motif
Other DBs
NCBI-GeneID:
118399646
NCBI-ProteinID:
XP_052328667
EnsemblRapid:
ENSOKEG00005043468
LinkDB
All DBs
Position
20:32792444..32880965
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AA seq
782 aa
AA seq
DB search
MHTVNLESQKNSTMSKAKEKSAKKRVVEEDDDQLPIFDQDVTEKKAGEEDDADLSDSEES
VFSGLEDSGSDSHDEEEDAEEGDDEEDDDAVILDEILTKSSGVETATEAPATDKNTPTQP
DVKTAPKQKMKMKKGEGVAMDDGGEKGLITTRHGDEYEHDTSDEEDIRNTVGNIPMEWYQ
DYPHIGYNLDGKKIFKPIRNKDELDEFLDKMENPDYWRTVHDKTTASDIRLSDEQVDLVH
RLQKGQFGDVNFNEYEPSVDFFTNEVMIHPVTNRPQDKRSFIPSLIEKEKVSKLVHAIKM
GWIKPRKPKETTPQYYDLWAKEDPNAILGRHKMHVPAPKMRLPGHEESYNPPPEYLLTEE
ERMAWEQQDAEDRKLPFLPQKHSCLRAVPAFSRFIHERFERCLDLYLCPRQRKMRVNVNP
EDLIPKLPKPKDLQPFPTTMSLVYIGHSSLVRSISASPTGQWLVSGSDDCTVRFWEVNTG
RCMKTLEVGGAVKSVAWNPNPAVCLVAVCFESTVLLLNPGLGDRLVVSSTDQLITSYEPP
EEDKEQAVTWALSEGPEHDNGHRLTLTHPKAVKQVVWHGKGDYLASVMPDNSSNLQVLIH
QVSKRRTQNPFRKNKGLVQCVSFHPLRPYFFVATQRYVRVYNLIKQELTKKLMTNCKWIS
SMAIHPGGDNLICGSYDCRLAWFDLDLSTKPYKMLRHHKKALRGVAYHKHYPLFASGADD
GSVIICHGMVYNDLLQNPLIVPVKVLKGHQITHDLGVLDVTFHPTQPWVFSSGADATIRL
FT
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgcatacggtgaatcttgaatcacagaaaaacagcaccatgagtaaagctaaagaaaag
agtgcgaagaaaagagttgttgaagaggacgatgaccagcttcccatatttgaccaagat
gtcactgagaagaaggctggggaggaggacgatgcagacctctcagatagcgaggagagt
gtgttctctggactggaagactctgggagtgacagccacgatgaagaagaggatgctgaa
gaaggggatgatgaagaagatgatgatgctgtaattcttgatgagattctgacgaagagt
agtggtgttgaaacagctactgaagcgcctgcaacagataagaatacacccacgcagcca
gacgttaaaactgcaccaaagcagaagatgaagatgaaaaaaggtgagggagtcgccatg
gacgacggaggagagaagggcctgatcaccacccggcatggggacgagtatgaacacgac
acctccgatgaagaggacattcgtaacactgtgggcaacattcccatggagtggtaccag
gactaccctcacatcggctataacctggacgggaagaagatctttaagcccatcaggaac
aaagacgagctggatgagttcctggacaagatggagaacccagactactggcgtacggtc
catgacaagacgacagcctcagacatccgtctgtcagacgagcaggtggacctggtgcac
cgtcttcagaagggccagttcggcgacgtcaacttcaatgagtacgagccgtcagtggac
ttcttcaccaacgaggtcatgatccatccggtgaccaacaggccccaggacaaacggagc
ttcatcccctcgctcatagagaaggagaaggtttcgaagctggtccatgccataaagatg
ggttggatcaagccccgtaagcccaaagagaccacccctcagtactacgacctgtgggcc
aaggaggaccccaacgccatcctgggacgccacaagatgcacgtccctgcccccaagatg
aggctgcccggacacgaggagtcctacaaccctccacctgagtacctgctcacagaggaa
gagagaatggcgtgggaacagcaggatgcagaggacaggaagctcccgttcctcccccag
aaacactcctgtctgagggccgtgcccgccttctcccgcttcatccacgagcgatttgaa
cgctgcctcgacctctacctgtgtccccgccaacgcaagatgagggtgaatgtgaatcca
gaagatctgatccccaagctgcccaaacccaaggacctgcagcccttccccaccaccatg
tccctggtgtacattggccacagcagtctggtgcgttccatcagtgcatctcccactggc
caatggctggtctcaggctcagatgactgtacggtgcgcttctgggaggtcaacacgggg
cgatgcatgaagacgctggaagtgggcggagctgtgaagagcgtggcgtggaaccccaac
ccggccgtctgcctggtggctgtgtgctttgagagtacagtgctgctgttgaacccaggt
ctgggagacaggctagtggtgagctccacagaccagctgattacctcctatgagccccca
gaggaggacaaggagcaggctgttacgtgggctctgtctgagggcccggagcacgacaat
ggccaccgcctcaccctcacccaccccaaggcagtgaagcaggtagtttggcacggtaag
ggtgactacctggccagcgtcatgcctgacaacagcagcaacctgcaggtgctcatccac
caggtgagcaagcgacggacgcagaaccccttccgcaagaacaagggcctggtgcagtgc
gtctccttccacccactgcggccctacttcttcgtggccacgcagcgctacgtgcgcgtc
tacaacctcatcaagcaagagctgaccaagaagctgatgaccaactgcaagtggatctcc
agcatggccattcaccctggaggtgataacctgatctgtggcagctatgactgcagacta
gcctggtttgatctggacctctccaccaaaccctacaagatgctgcggcaccacaagaag
gctttgaggggcgtggcctatcacaaacactaccccctattcgcctctggtgctgatgat
ggcagtgtgatcatctgtcacggcatggtctacaatgacctgctccagaaccctctcatt
gttccagtcaaggtactcaagggtcaccagatcacccacgacctgggggtcctagacgtg
accttccaccccacccagccctgggtgttctcctcaggggctgacgccaccatccgcctc
ttcacctaa
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