Oncorhynchus keta (chum salmon): 118399650
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Entry
118399650 CDS
T09424
Name
(RefSeq) ATP-dependent DNA helicase Q4-like
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oke03032
]
118399650
03400 DNA repair and recombination proteins [BR:
oke03400
]
118399650
Enzymes [BR:
oke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118399650
DNA replication proteins [BR:
oke03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
118399650
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
118399650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Drc1-Sld2
zf-CCHC
ResIII
zf-CCHC_3
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
118399650
NCBI-ProteinID:
XP_035651803
LinkDB
All DBs
Position
20:32941113..32965170
Genome browser
AA seq
1564 aa
AA seq
DB search
MDRYNDVKILLKTWEQSFVQEHQRKPNKGDIDAAPEEAKKLYKEYRTLKQAKENGNNGHT
DPTPTAQTQSSEKESDCWGTHLNRKSMPVAAPKLTLTPKDKESLQASAQYFGMKLKSNLG
ALTKERPVSLKKSFTPRRTPLKSWKDGQSPNPAAGAAGSDTLLSPLLMPANTRPHLLACP
VQTGTEHPQQPFEPIPAFTPSKLWSPAAGASSSDRPAGSRAQQLRQTFTKRLSSVDSSWL
ERCQVFDEVGVAEKPVVGNLSLAVVSEVDSPPAKGGGVGEGENPGRAASSFVIPSMQKEG
TTLLGERASKSTMPQALPFSDEQQPKIGCGVTSAAVPASLRSTGQHSSLGSGSGEGKDGE
TRPGLRGQAEGGTSEETAIGASTAKKSRARARKGRVGRVEEEAEVSTQPPQKAEGDELGP
EKKGTKKKAKKRQRDLDTDGENPDDTEKEGAVKKRRTKKVTEATVDGRSPKKVPRVRKKK
AQTGDGNASEQGSGDVTEKEAVKQKPRVPQENLLGEVDEEDVKAARNRGSNTMRPKPTKN
SDCNFVRINLKNKSHVKGYACRGAGLRKQLTMEKFQLKGERFGGPDSRFRGGRSRGGFRG
GRGRGGFNHPGDSCFKCGGTGHWAMNCKGRVGAPVDSAAADEASAVEEPFELPTLEEVAR
ATGTLRSEPRVAPPIVKEENEGLGDKQEDGGDEVLLNVIRPDYERLLPPPPMQPLYPLGE
DGKVQAVPSEVNEALKDFGYKSFRPGQEQAIMRILSGLSTLVVLSTGMGKSLCYQLPAYL
YAQRSNSITLVVSPLVSLMDDQLSGLPSKLKAAAIHSNMSKKQREVAIEKVKAGKVHVLL
LSPEALVGGGHSGSGCLPPADQLPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRDRLG
VRCLLGLTATATLSTSLDIAQNLGITDQDGVAVRSAAVPNNLQLSVSMDRDKDQALVCLL
KGERFGSLESVIIYCTRREETTRISALLRTCLQGVLLKESNRTASQEADDNPVGKKKKAL
ARKKIRKPLKWMAESYHAGMSSSERRRVQNNFMCGELRVVVATVAFGMGLDKSDVRGIVH
YNMPKSFESYVQEIGRAGRDGEPAHCHLFLDPEGGDLHELRRHIYANTVDYYTVKKIVQK
VFPPCRCRQIHQNQQDLTRTQEEVDDSEMMELMDTCDENPVETPEHTTETGQNTPVEKLE
QAKVPTEDVSTFQPLDGEQKHPPESSVPFPQRGDGEHEEEEQTGGGDDWPTTRVCQTHER
AIPMQDTVEALDITEEGLETLLCYLELHPQQWVELLHPTLSTCKMVCYNGPHQLRKLTKI
CPPVAVVLARKRLAGERVDTCDSVDFDVVEVADTMGWQLGLVKRGLRQLQWATNRGVLVE
FSNLSFYFRSYGDLTPDEMDRVCEFLHGRVVAQERTKLYQLKACFKAFRSVAFKSCSVCA
DKLDESRSLKLKGLLGDYFDKRRELDLSRKFQEEKDGEDEEELLLKCKMKDFEGQIRADI
QSFLGNRSDEKFSGRAVARIFFGIGSPCYPAQTFGRDKRYWRKYIQFDFNEIIRFAIQEI
IRFK
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggatcgatacaatgatgtgaagattcttctgaaaacctgggagcagtcatttgttcaa
gaacatcaaagaaagcccaacaagggtgatattgacgcagccccagaagaggctaaaaag
ctctacaaagaatatcgaacactcaagcaagcaaaagaaaacggcaacaatgggcataca
gacccaacacctactgcacagactcagtcatctgagaaggaatctgattgctggggcact
cacctgaaccgtaagagcatgccggtggctgcccccaaactgacgctgacgcccaaggac
aaggagtccctccaagcctcggcccagtactttggcatgaagctcaaatcaaacctgggt
gctctaacaaaggaaagaccggtttctctgaagaagtcgttcacgccacgtcgaacacct
ctgaagtcctggaaagacggccagagcccaaaccctgcagctggtgctgcaggcagcgat
acactgttatcccctctgctaatgccagccaacacacgtccacacctcctggcctgtcca
gtgcagacagggacagaacacccacagcagccctttgagccaataccagccttcacgccc
tccaagctgtggtctcctgcagcgggggcatcctcatcagacagaccggcaggaagtagg
gcccagcagctcagacagaccttcaccaagaggttatcctctgtagacagcagctggctc
gagagatgtcaggtgtttgacgaggtgggtgtcgcggagaagccggttgtgggtaatttg
tctctcgccgtggtgtcggaggtagattcaccaccggccaaagggggaggtgttggcgag
ggagagaacccaggacgtgccgccagttcctttgtcataccttccatgcagaaagaaggg
acaactctcctgggggagagggcttccaagagtaccatgccacaggctctgcctttttca
gacgagcaacagcccaaaattggttgtggcgtaacgtctgcagcagtcccagccagtctg
cggtccactggacaacactcctcattggggtctggctccggagagggaaaggatggagaa
accagaccaggtctcagaggacaggccgagggcggaacgtcagaagagacagccatcggc
gcctccaccgccaagaaatctcgagcaagggccagaaagggccgggtaggaagggttgaa
gaggaggcagaggtgtcgacgcagccaccacagaaagctgagggtgacgagctcgggccg
gagaagaaaggtacgaagaaaaaggccaaaaagaggcaaagggaccttgacacagatgga
gagaaccctgacgacacagagaaagagggggcggtgaaaaagaggagaaccaaaaaggtt
acagaggctacagttgatggcaggagtcccaaaaaagtccccagagtgaggaagaagaag
gctcagacgggtgatggaaatgctagcgagcaggggagtggtgatgtcacagagaaggaa
gcagtgaagcagaaaccaagggttccacaggagaacctcctaggagaggtggatgaggaa
gatgtcaaagctgccaggaacagagggagcaacactatgagacctaaacctaccaagaac
tcggactgtaactttgtaaggatcaacctgaaaaataagtctcatgtcaaaggatacgca
tgtaggggcgctggcctacggaagcagttgaccatggagaagttccagctaaagggggag
aggtttggaggaccagactcgcggtttagagggggaagaagcagaggagggtttagaggg
ggaagaggcagaggagggttcaatcatccaggggacagctgcttcaagtgtggaggcaca
gggcactgggctatgaactgcaagggcagagttggagctccagtagacagtgctgctgct
gatgaggcgtctgcggttgaggagcccttcgaactgccaaccttggaagaagttgcccgg
gcaacgggaactctacgttccgagcctcgggtggcgccccccattgttaaagaggagaat
gagggtctgggggacaagcaggaggatggtggtgacgaggtcttgttgaatgtgatcagg
ccggattacgagcgcctgctccctccgccccccatgcagcccctctaccccctaggggag
gacggcaaagtacaagcggtgccctctgaagttaatgaagcacttaaagactttgggtac
aagtctttcagaccagggcaggaacaggccatcatgagaattctatcaggtctgtccacg
ctagtggtgctttctacgggcatgggcaagtctctgtgctaccagctgcctgcctacctc
tatgcccagaggtctaacagtatcactctggtggtgtcaccacttgtgtctcttatggat
gatcagctttctggactcccatccaagctgaaagcggctgccattcactccaatatgtct
aaaaaacagagagaggttgccattgagaaggttaaggcaggtaaggtccatgtcctgctc
ctgtcccctgaggcgttggtaggtggaggtcactctggctctggctgtcttcccccagct
gaccagctccccccggtggccttcgcctgtatcgacgaggcccactgtgtctcagagtgg
tcacacaactttaggccctgctacctgcgtctctgcaaggtgttgagggaccgtctgggc
gtgcgttgcctgttgggtctgactgccaccgccaccctgtccacatccctggacatcgct
caaaacctgggcatcactgaccaggacggtgttgctgtccgctcagccgcagtgcctaac
aacctgcagctgtctgtctccatggaccgagacaaggaccaggccctggtgtgtctgctg
aagggtgagcggtttgggtctctggagtccgtcatcatctactgcaccaggagagaggag
acgacccgtatatctgccctgctcaggacctgcctgcagggggtgctgttgaaggagtct
aaccgtacagctagtcaggaggcagatgacaaccctgtagggaagaagaagaaagctttg
gccaggaagaagatccgtaagcctctgaagtggatggctgagtcctaccatgccggcatg
tcgtcctccgagcgtcgtcgtgtccagaacaacttcatgtgtggtgagctgcgagtggtg
gtcgccacggtagccttcggcatgggcctggacaagtcggacgtgcgtggaatcgtgcac
tacaacatgcccaagagctttgagagctacgtgcaggagatcgggagggcagggagagat
ggggaaccggcccactgtcatctcttcctggatcctgagggaggggacctgcatgagttg
cggaggcacatctatgccaatacggtggattactatactgtgaagaagatagtgcagaag
gtgtttcctccctgcaggtgcagacagatccaccagaaccagcaggacctaaccaggact
caggaggaggttgatgactccgagatgatggaactgatggacacctgtgatgagaaccca
gttgaaacaccggaacacacaacagagactggtcagaacacccccgtcgagaagttggaa
caggccaaagttcctactgaggatgtatcaacttttcaaccactggacggagagcagaaa
cacccaccagagtcaagtgttccatttccccagagaggggatggcgaacatgaagaggag
gagcagacagggggaggtgatgattggcccacgactagggtgtgtcaaacccatgagagg
gccatacctatgcaggacactgtggaagccctggacatcactgaggaaggtttggagact
ctgctgtgctatctggagctgcaccctcagcagtgggtagagctgctccaccccaccctc
tccacctgtaagatggtctgttacaacggcccgcatcaactccgcaaactcaccaaaatc
tgcccacctgttgccgtagtgttagcccgaaaacggctggcaggggagcgagtggacacc
tgtgattcggtcgactttgatgtggtggaggtggcagacactatgggctggcagctgggt
ctggtgaagagaggcctcagacaactacagtgggccacaaacagaggagtcttggtggag
ttctccaacctgtccttctacttccgttcctacggtgatttgaccccggatgagatggac
cgggtgtgtgagttcctgcatggcagggtggtggcccaggagaggaccaaactgtaccag
ctcaaagcctgcttcaaggccttccgcagcgttgcattcaagagctgcagtgtctgtgcg
gacaagctggacgagagcagaagcctgaagctgaaagggcttctgggggattactttgat
aagaggagagaactggacctgagcaggaagttccaggaggagaaggatggcgaggacgag
gaggagctgttgttgaaatgcaagatgaaggacttcgagggtcagatcagagcagacatt
cagagtttcctgggcaaccgcagtgatgagaagttctctggcagagccgtcgctagaata
ttctttggaattgggagtccatgttacccagctcagaccttcggcagggacaagagatac
tggagaaaatacatccaatttgattttaatgaaatcatccgctttgctattcaggagatc
attcgattcaagtga
DBGET
integrated database retrieval system
