Oncorhynchus keta (chum salmon): 118399689
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Entry
118399689 CDS
T09424
Name
(RefSeq) neurofascin-like isoform X1
KO
K06757
neurofascin
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118399689
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118399689
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
L1 family
118399689
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
C2-set_2
Ig_5
Ig_4
Ig_6
Ig_VEGFR-1-like_5th
MHC_II_alpha
DUF3792
Motif
Other DBs
NCBI-GeneID:
118399689
NCBI-ProteinID:
XP_052329708
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All DBs
Position
21:complement(34521318..34704472)
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AA seq
1178 aa
AA seq
DB search
MLVQVGPWVLSAMSLLLLLWQEMSAIEVPLDQKIQQDLKQPPTIMKQSLKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNVWKDPRVTMRKRSGTLEISFRSGGRPEDYEGEYQCF
ASNDFGTALTNKILLRVSKSPLWPKEVLEPVVVGEGSSLVLACNPPPGLPPPHTFWMNSA
MMSITQDRRVSMGLNGDLYFSNVLAKDSHTDYSCNARFLFTHTIQQKNPFTLKVQASRKV
AETPPNFLSPTGTDSSRMMVLRGQKLQLECIAAGFPTPSIKWFKKGGDLNQKVKLDNFNK
TLRIDSVSEEDAGEYMCMANNQIGSIRHSIFVQVKAAPYWLDKPFNLVLAPDESSRLVCR
ANGNPKPLIQWLVNGESMERNSSLPNPRRSVVGDTIIFHSVQIGSSAVYQCNASNHHGYL
LANAFVSILDMAPRMLGAKNQLIKVIENNRTFLDCPFFGSPLPELRWFKNGQGSGLDGGQ
YRVYINGSLEIKRARVEDQGTYTCVARNILGKEENQVRLEVKEPTRIVRAPEHQSAFRGT
MARFDCRVKSDLTLPITVTWLKDDKPLSLGWRLKKDEDSLSIPNVHEQDEGTYTCTVKSE
IDQDTASARLTVLEGTSLYPTQSSALPAAPDAFPSGLKGWGTKNTNMEISWEPLLDTEQN
GPNLHYSVWWRRKDTGEEWNNVTTVGAKHIVHDTETYVPYEIKLQARNDFGAGPESNIII
GYSGEDKPTAPPTDLHVSKIDSTMVNVHWTPVDPKTVRGEFKEYRLYYWREGSMVKGLHV
NKEKKTKGFYSTVAQPTGILTDLQPYSHYRMFMVVANSRYDGPPSNHVDFHTKEGVPDLP
QFFKIVQRSPESIHLEWDKPLEPNGILIGYTLNYQAVNGSRVGHMQMESFLPNVTAYRLR
LPDQAIRYRFYLAAHTQVGAGKVYAGESPHFTNEGMAPGRVIWNLTVKPNSNYANVSWDH
NFPMGSSEFQLEFTLDGNGSVSSVPVNQPPIKLAGLIEGAKYRLRVYSNEYHSISSNVVT
FETSAAYIKDQVDIATQGWFIGLMCAIALIILILLIVCFIKRSRGGKYPVRDKKDIPLEG
MDQKGEDGSFDYKNENENEKENSSDEDNKPLQGSQNSLDGGVKESDDSLVDYGEGGDGQF
NEDGSFIGQYTVKKDKDETEGNESSEATSPVNAIYSLA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgcaggtcgggccttgggtcctgtctgccatgtcattgctcctgctgctgtgg
caagaaatgtctgctatcgaggttcctcttgatcaaaagatccagcaggatttgaagcag
cctcccaccataatgaaacagtcattgaaggactacattgttgatcccagagataacatc
atcattgaatgtgaggccaaggggaaccccgtgccaacgttctcatggcgacggaacggg
aagttcttcaacgtgtggaaggatccacgggtgacgatgcggaagcgctcgggaacgctg
gagattagcttccggagcggagggaggccagaggactatgagggggaataccagtgtttc
gcctctaatgactttggaacggcgctgaccaacaagatcctactacgagtgtccaagtcc
cctctgtggcccaaggaggtgttggagccagtagtagtgggtgagggttcttccctggtc
ttggcctgtaaccctcctccaggcctgccccctccacacaccttctggatgaacagcgcc
atgatgtctataacccaagataggcgtgtgtccatgggtctgaatggagatctgtatttc
tctaatgttctggctaaagactcgcacacagactacagctgcaacgcccgcttcctcttc
acacacaccatccagcagaagaaccccttcacactcaaagtgcaggccagtcgtaaggta
gcagagactccccctaacttcctctcccccacggggactgacagctcaaggatgatggtg
ctgagaggacaaaaactacagctggagtgtatcgctgccggatttcccacccccagtata
aagtggtttaagaagggaggagatctgaaccagaaggtgaagctagacaacttcaataag
actctgcgtattgacagcgtgtcagaggaggacgcaggggagtacatgtgtatggccaac
aatcagataggaagcatccgacactccatcttcgtccaggttaaagcggctccctattgg
ctggacaagccgttcaacctggtgttagcaccggatgagagcagtcgtctggtgtgtcgg
gccaatgggaaccccaaaccactcatccagtggctggtcaacggagagtctatggagaga
aatagctccctgcccaaccccagaagatcggtggtaggtgacaccatcatctttcactct
gttcagatcggcagcagcgctgtgtaccaatgtaacgcctccaatcaccatggttacctg
ctggccaacgctttcgtcagcatattggacatggctcccaggatgcttggtgctaagaac
cagctaataaaggtgatagagaacaacagaaccttcctggactgtcccttctttggctca
ccacttcctgagctacgttggtttaagaatggtcagggcagtggtctggacggtggtcaa
tatcgtgtctacatcaatgggagcctagagatcaagcgtgcgcgggttgaggaccagggt
acatacacctgtgtggccagaaacatcctgggcaaggaggagaaccaggtccgactggag
gtcaaagagccgacccgtatcgtcagggctccagagcaccagtcagcatttagaggcacc
atggctcgttttgactgccgggtcaaatcagacctcaccctgcccatcactgttacctgg
ctgaaggatgacaagcctctctctctgggatggaggttaaagaaggatgaggattccctg
tccatccctaatgtccacgagcaggatgagggaacatacacctgtactgttaaatcagag
atcgaccaagatactgcctcagcacgccttactgtgttagagggcacctccctgtatccc
acacagtctagtgccttgcctgcagctcctgatgctttccctagtggcctgaaaggctgg
ggcaccaagaacacaaacatggagatcagctgggagcccttgttggacacagagcaaaac
ggccctaacctgcactactcggtgtggtggaggcggaaggatacgggggaggaatggaac
aacgtgactacggtgggggcgaagcacattgtccacgacacagagacctacgttccctat
gagatcaaactgcaggccaggaatgactttggagcaggacctgagtccaacatcatcata
ggatattctggggaggacaagcctacagcccctcctacagacctgcatgtgtcaaagatt
gacagcaccatggtcaacgtccactggaccccggtagaccccaaaactgtccggggagag
ttcaaggagtacaggctgtactactggcgtgagggcagcatggtgaagggtctgcatgtg
aataaagagaagaagactaaagggttctacagtaccgtggcccagcctactggcatattg
acagacctacagccatacagccactaccgcatgtttatggtggtcgccaacagtcgttac
gatgggccgcctagcaaccatgtggattttcataccaaggaaggagtgccagatcttcct
cagttctttaagatcgtccagaggagtccagagtctatccacctggagtgggacaaaccc
ctggagcctaacggcattctgattggatacacactcaactatcaagcagtgaacgggtcg
cgtgtgggccacatgcagatggagagtttcctacctaacgtgacagcctacagactccgc
ttaccagaccaagctatccgctacaggttctacctggcggcccacacacaggtgggagca
gggaaggtctacgctggggagtctccacatttcaccaatgaaggcatggctcctgggagg
gtgatctggaacctgacggtgaagcctaacagtaactacgctaacgtcagctgggaccac
aacttcccgatgggcagcagcgagttccagctagagttcacactggacggcaatggcagt
gtgtcaagcgtaccagtgaaccagccgcccattaagctggcggggctgatcgaaggggcc
aagtaccgcctgagggtgtactccaacgaataccacagcatctccagcaatgttgtcacc
tttgagaccagcgcagcctacattaaagaccaggtggacattgctacccagggctggttt
atcgggctgatgtgtgccatcgctctcatcatcctcatcctcctcatcgtctgtttcatc
aagaggagtcgcggaggcaaatatccagtacgggataaaaaagatatccctctggaggga
atggatcagaagggagaggatggatcatttgactacaagaatgaaaatgagaacgaaaag
gagaacagcagcgacgaggacaacaagcctctgcagggcagccagaactctctggatggc
ggtgtgaaggagagtgacgacagcctggtggactatggcgagggaggggatggccagttc
aacgaggacggttccttcatcggccagtacactgtcaaaaaggacaaggacgagacggaa
ggcaacgagagttccgaggccacctcacccgtcaacgccatctactcgctggcatag
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