KEGG   Oncorhynchus keta (chum salmon): 118399689
Entry
118399689         CDS       T09424                                 
Name
(RefSeq) neurofascin-like isoform X1
  KO
K06757  neurofascin
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:oke00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    118399689
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oke04515]
    118399689
Cell adhesion molecules [BR:oke04515]
 Immunoglobulin superfamily
  L1 family
   118399689
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 Bravo_FIGEY V-set C2-set_2 Ig_5 Ig_4 Ig_6 Ig_VEGFR-1-like_5th MHC_II_alpha DUF3792
Other DBs
NCBI-GeneID: 118399689
NCBI-ProteinID: XP_052329708
LinkDB
Position
21:complement(34521318..34704472)
AA seq 1178 aa
MLVQVGPWVLSAMSLLLLLWQEMSAIEVPLDQKIQQDLKQPPTIMKQSLKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNVWKDPRVTMRKRSGTLEISFRSGGRPEDYEGEYQCF
ASNDFGTALTNKILLRVSKSPLWPKEVLEPVVVGEGSSLVLACNPPPGLPPPHTFWMNSA
MMSITQDRRVSMGLNGDLYFSNVLAKDSHTDYSCNARFLFTHTIQQKNPFTLKVQASRKV
AETPPNFLSPTGTDSSRMMVLRGQKLQLECIAAGFPTPSIKWFKKGGDLNQKVKLDNFNK
TLRIDSVSEEDAGEYMCMANNQIGSIRHSIFVQVKAAPYWLDKPFNLVLAPDESSRLVCR
ANGNPKPLIQWLVNGESMERNSSLPNPRRSVVGDTIIFHSVQIGSSAVYQCNASNHHGYL
LANAFVSILDMAPRMLGAKNQLIKVIENNRTFLDCPFFGSPLPELRWFKNGQGSGLDGGQ
YRVYINGSLEIKRARVEDQGTYTCVARNILGKEENQVRLEVKEPTRIVRAPEHQSAFRGT
MARFDCRVKSDLTLPITVTWLKDDKPLSLGWRLKKDEDSLSIPNVHEQDEGTYTCTVKSE
IDQDTASARLTVLEGTSLYPTQSSALPAAPDAFPSGLKGWGTKNTNMEISWEPLLDTEQN
GPNLHYSVWWRRKDTGEEWNNVTTVGAKHIVHDTETYVPYEIKLQARNDFGAGPESNIII
GYSGEDKPTAPPTDLHVSKIDSTMVNVHWTPVDPKTVRGEFKEYRLYYWREGSMVKGLHV
NKEKKTKGFYSTVAQPTGILTDLQPYSHYRMFMVVANSRYDGPPSNHVDFHTKEGVPDLP
QFFKIVQRSPESIHLEWDKPLEPNGILIGYTLNYQAVNGSRVGHMQMESFLPNVTAYRLR
LPDQAIRYRFYLAAHTQVGAGKVYAGESPHFTNEGMAPGRVIWNLTVKPNSNYANVSWDH
NFPMGSSEFQLEFTLDGNGSVSSVPVNQPPIKLAGLIEGAKYRLRVYSNEYHSISSNVVT
FETSAAYIKDQVDIATQGWFIGLMCAIALIILILLIVCFIKRSRGGKYPVRDKKDIPLEG
MDQKGEDGSFDYKNENENEKENSSDEDNKPLQGSQNSLDGGVKESDDSLVDYGEGGDGQF
NEDGSFIGQYTVKKDKDETEGNESSEATSPVNAIYSLA
NT seq 3537 nt   +upstreamnt  +downstreamnt
atgttggtgcaggtcgggccttgggtcctgtctgccatgtcattgctcctgctgctgtgg
caagaaatgtctgctatcgaggttcctcttgatcaaaagatccagcaggatttgaagcag
cctcccaccataatgaaacagtcattgaaggactacattgttgatcccagagataacatc
atcattgaatgtgaggccaaggggaaccccgtgccaacgttctcatggcgacggaacggg
aagttcttcaacgtgtggaaggatccacgggtgacgatgcggaagcgctcgggaacgctg
gagattagcttccggagcggagggaggccagaggactatgagggggaataccagtgtttc
gcctctaatgactttggaacggcgctgaccaacaagatcctactacgagtgtccaagtcc
cctctgtggcccaaggaggtgttggagccagtagtagtgggtgagggttcttccctggtc
ttggcctgtaaccctcctccaggcctgccccctccacacaccttctggatgaacagcgcc
atgatgtctataacccaagataggcgtgtgtccatgggtctgaatggagatctgtatttc
tctaatgttctggctaaagactcgcacacagactacagctgcaacgcccgcttcctcttc
acacacaccatccagcagaagaaccccttcacactcaaagtgcaggccagtcgtaaggta
gcagagactccccctaacttcctctcccccacggggactgacagctcaaggatgatggtg
ctgagaggacaaaaactacagctggagtgtatcgctgccggatttcccacccccagtata
aagtggtttaagaagggaggagatctgaaccagaaggtgaagctagacaacttcaataag
actctgcgtattgacagcgtgtcagaggaggacgcaggggagtacatgtgtatggccaac
aatcagataggaagcatccgacactccatcttcgtccaggttaaagcggctccctattgg
ctggacaagccgttcaacctggtgttagcaccggatgagagcagtcgtctggtgtgtcgg
gccaatgggaaccccaaaccactcatccagtggctggtcaacggagagtctatggagaga
aatagctccctgcccaaccccagaagatcggtggtaggtgacaccatcatctttcactct
gttcagatcggcagcagcgctgtgtaccaatgtaacgcctccaatcaccatggttacctg
ctggccaacgctttcgtcagcatattggacatggctcccaggatgcttggtgctaagaac
cagctaataaaggtgatagagaacaacagaaccttcctggactgtcccttctttggctca
ccacttcctgagctacgttggtttaagaatggtcagggcagtggtctggacggtggtcaa
tatcgtgtctacatcaatgggagcctagagatcaagcgtgcgcgggttgaggaccagggt
acatacacctgtgtggccagaaacatcctgggcaaggaggagaaccaggtccgactggag
gtcaaagagccgacccgtatcgtcagggctccagagcaccagtcagcatttagaggcacc
atggctcgttttgactgccgggtcaaatcagacctcaccctgcccatcactgttacctgg
ctgaaggatgacaagcctctctctctgggatggaggttaaagaaggatgaggattccctg
tccatccctaatgtccacgagcaggatgagggaacatacacctgtactgttaaatcagag
atcgaccaagatactgcctcagcacgccttactgtgttagagggcacctccctgtatccc
acacagtctagtgccttgcctgcagctcctgatgctttccctagtggcctgaaaggctgg
ggcaccaagaacacaaacatggagatcagctgggagcccttgttggacacagagcaaaac
ggccctaacctgcactactcggtgtggtggaggcggaaggatacgggggaggaatggaac
aacgtgactacggtgggggcgaagcacattgtccacgacacagagacctacgttccctat
gagatcaaactgcaggccaggaatgactttggagcaggacctgagtccaacatcatcata
ggatattctggggaggacaagcctacagcccctcctacagacctgcatgtgtcaaagatt
gacagcaccatggtcaacgtccactggaccccggtagaccccaaaactgtccggggagag
ttcaaggagtacaggctgtactactggcgtgagggcagcatggtgaagggtctgcatgtg
aataaagagaagaagactaaagggttctacagtaccgtggcccagcctactggcatattg
acagacctacagccatacagccactaccgcatgtttatggtggtcgccaacagtcgttac
gatgggccgcctagcaaccatgtggattttcataccaaggaaggagtgccagatcttcct
cagttctttaagatcgtccagaggagtccagagtctatccacctggagtgggacaaaccc
ctggagcctaacggcattctgattggatacacactcaactatcaagcagtgaacgggtcg
cgtgtgggccacatgcagatggagagtttcctacctaacgtgacagcctacagactccgc
ttaccagaccaagctatccgctacaggttctacctggcggcccacacacaggtgggagca
gggaaggtctacgctggggagtctccacatttcaccaatgaaggcatggctcctgggagg
gtgatctggaacctgacggtgaagcctaacagtaactacgctaacgtcagctgggaccac
aacttcccgatgggcagcagcgagttccagctagagttcacactggacggcaatggcagt
gtgtcaagcgtaccagtgaaccagccgcccattaagctggcggggctgatcgaaggggcc
aagtaccgcctgagggtgtactccaacgaataccacagcatctccagcaatgttgtcacc
tttgagaccagcgcagcctacattaaagaccaggtggacattgctacccagggctggttt
atcgggctgatgtgtgccatcgctctcatcatcctcatcctcctcatcgtctgtttcatc
aagaggagtcgcggaggcaaatatccagtacgggataaaaaagatatccctctggaggga
atggatcagaagggagaggatggatcatttgactacaagaatgaaaatgagaacgaaaag
gagaacagcagcgacgaggacaacaagcctctgcagggcagccagaactctctggatggc
ggtgtgaaggagagtgacgacagcctggtggactatggcgagggaggggatggccagttc
aacgaggacggttccttcatcggccagtacactgtcaaaaaggacaaggacgagacggaa
ggcaacgagagttccgaggccacctcacccgtcaacgccatctactcgctggcatag

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