KEGG   Oncorhynchus keta (chum salmon): 118399703
Entry
118399703         CDS       T09424                                 
Name
(RefSeq) protein bicaudal C homolog 1-A-like isoform X1
  KO
K18756  protein bicaudal C
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118399703
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     118399703
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_GLD-3_3rd KH_Mug60-KHD4 SAM_Ribosomal_mS41
Other DBs
NCBI-GeneID: 118399703
NCBI-ProteinID: XP_035651847
LinkDB
Position
2:complement(34704823..34776698)
AA seq 991 aa
MATQCDSLSGYLQQSDQGSNSERSTDSPVPGSEDDLSGPHALPDPEWTEERFRVDRKKLE
IMLLAAAGGRVNGGEDFFQKVMDETKTQIAWPSKLKIGAKSKKDPHIKVCGKRDNVREAK
DRIMSVLDTKQTNRVTLKMDVSHTEHSHVIGKGGNNIKKVMEDTGCHIHFPDSNRNNQAE
KSNQVSIAGQPGGVEAARAKIRELLPLVLSFELPAIVQPDPGSPTVQHISQTYNLTVSFK
PPTRLYGTTGVVRGSQNNSSAVKRGTAMLLEHLAGSLASAISVSTHLDIAPQHHLFMMGR
NGSNIKHITQRTGAQIHFPDPNSPQKKSTVYIQGTIESVCLARQYLMGCLPLVLMFDIKE
DIEVEPQCITALMEQLDVFISIKPKPKQPSKSVIVKSVERNAVNMYEARKFLLGLESNGV
SSAMSPSSNGPTLICPVGLDILASAGLGLSSLGFLGASVPHSLSSSPAPNSVLNSLNSSM
SPMQNPSPSTPSPSSSLWPSSLTSTQGFSSQLMMHPVAQATLSSILLSGVQGYTQNTPSP
PPGLSPIDKQTNGVPDCSKGPCTINGHVKHPGSVYGRMSSASLADTVLNPNQCDSVQEAS
GHNPSEPRSSKSNQDQGSDTFVEVGMPRSPSHSANGNELKQMLASCKTSGKRQAVELLQG
TKNSHLQYVCPELHSDCLLSDPESSASDSPVTDKRAPGSERAAERAAQQNERDRIRLVPH
SSFANMQGQLEALEYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKELR
RANHVPYKPTMSTTYEVNSDYEGSPLSLSRSGSREGVGNGSDSDNWRDRNGGGNGLPSHA
EFPVSVCSPKRKQNKSAAEHYLSSSNYMDCISSITGSNGCSLQSSLKGSDLPELFSKLGL
GKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISGVNDYELNKNRRKLFE
APIRSSFLEGGASGRLSRQFHADMASVSGRW
NT seq 2976 nt   +upstreamnt  +downstreamnt
atggctacccagtgcgactctctgagcggatacttgcaacagtcggaccagggctcaaat
agcgagcgtagtactgactccccggtccccgggtccgaggatgacttgagcggaccccat
gccttaccagacccggagtggacggaggagagatttcgagtggaccgcaagaaactggaa
atcatgttattagcggccgctgggggacgagtcaatggtggcgaggatttctttcagaag
gtcatggatgaaaccaaaacacagatagcgtggccttccaaattgaagatcggagcaaag
tccaaaaaagatccgcacattaaggtttgtggaaagagagacaatgtgagggaagccaaa
gaccgaatcatgtcagtcctcgacacaaagcagactaacagggtaacccttaagatggac
gtgtcccacacagagcactcccacgtcatcggcaagggaggcaacaacatcaagaaggtg
atggaggacacgggttgccacatccacttccccgactccaatcgcaacaatcaggcggag
aagagcaaccaggtgtccattgcaggtcagccaggaggggtagaggcagctcgagccaaa
atcagggagctgctccctctagttttgtcgtttgagttgccggccatcgtgcagcctgac
ccaggctcccccacagtgcagcacatctcccagacctacaacctcaccgtatccttcaag
ccccccacgcggctctacgggaccaccggagtggtccgcggctcccagaacaactctagt
gccgtcaagaggggcactgccatgctgctggagcacctggcgggaagccttgccagtgcc
atctcagtcagtacccacctggacatcgccccgcagcaccacctcttcatgatgggccgt
aacggcagcaacatcaaacacatcacccagagaacaggagcccagatccacttccccgac
cctaacagcccccagaagaaatctactgtctacatccagggcaccatcgagtctgtctgc
ctggcgcgccagtacctcatgggctgcctgcccctggtgctgatgtttgacataaaagag
gacatcgaggtggagccccagtgtatcacagctctgatggagcaactggatgtcttcatc
agcatcaagcccaaaccaaagcagccaagcaagtctgtgatagtaaagagtgtggagcgg
aatgcagtgaacatgtacgaggcccggaagtttctgttgggtctggagagcaacggggtg
tcatcagccatgtccccctccagcaacggccccaccctcatctgtcctgtcggcctggac
atcctggcctctgctggcctggggctgagcagcctgggcttcctaggtgcatcagtgccc
cattctctcagtagctccccggctccaaactctgttctcaacagtctgaactcttccatg
agccctatgcagaaccccagccccagcaccccatctccctcctcctcactgtggcccagc
tctctcaccagcacccaaggcttctcgtctcagttgatgatgcaccctgtagcccaggcc
actctgagcagtatcctgctctctggggtccaggggtacacccagaacaccccctcccct
ccccccgggctttccccaatcgacaagcagaccaacggggtccccgactgctccaaaggc
ccctgtaccatcaatggacatgtcaagcatcctggctcagtctatggcaggatgtccagt
gcgtcactggcagacactgttctgaaccccaaccagtgtgactcggtccaggaggccagc
ggacacaacccgtcagaaccccgctccagcaagtccaaccaagaccaaggctctgacacc
tttgtggaagtgggcatgcccagaagcccatctcactcagcaaatggaaacgagctgaaa
cagatgctggcttcctgtaagacgtcagggaaacggcaggcggtggagctcctccagggg
accaagaactcccatctccagtatgtctgtccagagctacactcagactgcttactgtca
gacccagagtcgagtgcttcagacagcccagtgacagataagagggcaccgggcagtgag
cgggcagcagagagggcagcacagcagaacgagagggacaggatccgcttggtaccacat
tcttcctttgccaacatgcagggccaactagaggcgcttgaatatgaacagaaaaagctg
ttagcaaccaaggccatgttgaagaagcctgttgtgactgaggtgcggacccccactaac
acgtggagtggcctgggtttctccaagtctatgccagcagagaccatcaaggagctgcgc
agggccaaccacgtgccctacaaacccaccatgagtaccacctacgaggtaaactccgac
tatgagggctcccccctgtctctttcccgctctggcagcagagagggggtgggcaacggc
agtgactctgacaactggagagacaggaatgggggtgggaacggtcttcccagccacgcc
gaattcccagtgtctgtttgcagtcctaagaggaagcagaacaaatccgctgcagagcac
tatctgagcagcagtaactacatggactgtatctcctcgatcaccgggagcaacgggtgc
agtctccagtcctctctgaaagggtcggacctcccggagctgttcagcaagctgggcctg
gggaaatacacagacgtgttccaacagcaggagatcgatctccagaccttcctcactctt
acagaccaggacctgaaagagctgggcatcaccacatttggagcacgcagaaaaatgctg
cttgccatctctggtgtgaatgactacgaactgaacaagaaccgaaggaagctgtttgag
gctcctatcagatcctccttcctggaagggggagccagcggtcgtctgtctcgtcagttc
cacgctgacatggctagtgtcagtggtcggtggtag

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