Oncorhynchus keta (chum salmon): 118399846
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Entry
118399846 CDS
T09424
Name
(RefSeq) cadherin-4-like isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118399846
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118399846
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Major cadherins
118399846
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Fibulin_C
He_PIG
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
118399846
NCBI-ProteinID:
XP_052329301
LinkDB
All DBs
Position
21:11863233..12108171
Genome browser
AA seq
926 aa
AA seq
DB search
MNLGSVLILTCTLVVDTSWVTKADQRPKPPCRPGFSESFYTVFVSRDLLQGQNILKDTTL
SSERVKFDDCQHSKAVDFESSDPNFSVRPDGSVYAEQEVANLSDPVQFMLTARGGHDPHI
WETTVKLALAGHPPSVPVSQIGVEDMIARAWDSNPRVIKFPRKHQRSSSANGLRRQKRDW
VIPPINVPENSRGPFPQMLVRIRSDQDLEKGIRYSITGAGADQPPIDVYNIDPVHGKMFV
TRPLDREERASYHLRAHAVDMNGNKVESPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSK
PGTLVMQVTANDSDDDTTANGMVRYRILSQTPHMPIPNMFTINSETGDIFTVAAGLDREK
VSQYTIIVQATDMEGNLNFGLSNTATALISVTDINDNPPELTARTFSGEVPENRVNVVVA
NLTVIDRDQPHSPNWAAQYRIASGDPQGHFLIRTNPVNNDGMVTVVKAVDYEQNRAFMLT
VIVSNKAPLASGIQSSLQSSAGVTISVQDVNEPPVFPSNPKSIRFEEGVPAGTTLTVFAA
QDPDLFIHQTVRYSKLSDPANWLRINRTNGQITTMAVLDRESMYVRNNIYEATFLAADNG
SPPASGTGTLQIHLIDVNDNAPVLLPKEAQVCERASPRSRVNITASDADADPHVGPFVFE
LPSYPPSVRRNWTASRISGDYAQLRLRIPYLDAGVYEVPIIVSDSGNPPLSNRSMIKVKV
CPCDDNGDCTTTGAVAAAGLGTGAIIAILICIIILLTMVLVFVMWMKRREKERQAKPLLI
DPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPEALDHIICKPTGVRRVDERPVIAESQY
PIRPSLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGD
QDYDYLNDWGPRFKKLADLYGGGDDD
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaggctccgttcttatactgacgtgcaccttagttgtggacacatcttgggtg
accaaggcagaccaacgacctaaacccccatgcagaccaggcttttccgagagcttctac
acagtctttgtctctagggatctactgcaaggccagaacattctcaaagacaccaccctg
tcgagtgaacgtgtgaagtttgacgactgtcagcacagcaaggctgtggacttcgagagc
agcgaccctaacttcagtgtgcgtcctgacggctcggtgtacgcggagcaggaggtggcc
aacctgtcagatccagtccagttcatgttgaccgcccgcggaggtcatgaccctcatatc
tgggagaccacggtcaagctggccttggctggccacccgccttctgttcctgtgagtcag
attggggtggaggatatgattgcaagggcctgggactctaatcccagggttatcaagttt
ccacggaaacatcaaagaagctcttctgccaatggtctgagacgacagaagcgagactgg
gtcatcccaccaatcaatgtgccagaaaactctagaggacccttcccacaaatgcttgtc
agaatccgctcggaccaggacctggagaaggggatccgctacagcatcactggagcaggg
gcggaccagcctcccattgacgtgtacaacattgaccctgtgcacggcaagatgtttgtc
accagacccctggacagagaggagagggcctcctaccatctgcgggcccatgctgtggac
atgaatgggaacaaagtggaaagccccatagacctgtacatctacgtcatcgacatgaat
gacaaccggccagagttccagaaccaggtctacaacggctctgtggctgaaggctctaaa
ccaggcacgttagtgatgcaggtgaccgccaacgactcagatgacgacaccacagccaat
gggatggtgcggtaccggatcctatcccagaccccccacatgccaatccccaatatgttc
accatcaacagcgagacgggagacatcttcacggttgccgccggcttggacagggagaaa
gtgtcccagtacaccatcatcgtccaggccacggacatggaggggaacctgaactttggc
ctgtccaacacggccaccgccctcatctctgtgaccgacatcaacgacaaccctcccgag
ctgaccgccaggacgttttcgggggaggtcccagagaacagggtgaatgtggtggtggcc
aatctgacagtgattgacagggatcagcctcacagccccaactgggctgcccagtaccgc
atcgccagcggagacccccagggtcacttcctcatccgcaccaaccctgtcaacaatgac
ggcatggtcactgtggtcaaggcagtggactatgagcagaacagggccttcatgctgaca
gtgatagtctctaacaaggcccctctggccagtgggatccagtcttctctccagtcttca
gcgggggtcaccatctccgtacaggatgtcaacgaaccccctgtcttcccttccaacccc
aagtccatccgcttcgaggagggtgtccctgcaggcaccacactcaccgtgtttgctgcc
caagaccctgacctcttcatccatcagactgtccggtactcgaagctgtctgacccagct
aactggctgaggatcaacaggaccaacggtcagatcaccaccatggccgtcctggacagg
gagtccatgtatgtcaggaacaacatctatgaggccaccttcctggctgccgacaatggc
tctcccccagccagtgggacaggcaccctacagatacatctgatagatgtgaatgacaac
gctccagtgctgttgcccaaggaggcccaggtgtgtgaacgggccagcccccgctccagg
gtcaacatcacagcctccgacgccgacgctgaccctcacgtggggccttttgtgttcgag
ctgccctcctacccccctagcgtccgacgcaactggaccgcctcccgcataagcggtgac
tatgcccagctgagactgaggattccctacctggatgcaggggtgtatgaggttcccatc
atagtgtcggactctgggaacccgcccctctctaacaggtctatgataaaggtcaaggtg
tgtccgtgtgacgacaacggagactgtactaccaccggagctgtagctgccgctggactg
gggaccggagcgatcatagccatactcatctgtatcatcatactgcttacaatggtactg
gtgtttgtgatgtggatgaagcggagggagaaggagcgtcaggccaagcccctgttgatt
gacccagaggacgacgtcagagacaacatcctgaaatacgatgaggagggaggaggagag
gaggaccaggactatgacctaagccagctgcagcagcccgaggctctggaccacatcatc
tgtaaaccaacgggggtgcgcagggtggacgagaggcctgtcatcgctgagtcccagtac
cccatcagacctagcctgcctcatcccggagatattggagacttcatcaacgacggtctg
agggcagcagacaacgaccccacagccccgccctatgactccctgctggtgtttgactat
gagggcagcggctccacggccggctctgtcagctccctcaactcctcaagctcaggggac
caggactacgactacctgaacgactggggcccccgcttcaagaagctggctgacctctac
ggcggaggagacgacgactga
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