Oncorhynchus keta (chum salmon): 118399861
Help
Entry
118399861 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 10-like protein
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118399861
03036 Chromosome and associated proteins [BR:
oke03036
]
118399861
Membrane trafficking [BR:
oke04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118399861
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
118399861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
IQ_SEC7_PH
CFAP43_N
WD40_CDC20-Fz
RHG20_PH
SOS1_NGEF_PH
DUF7675
Motif
Other DBs
NCBI-GeneID:
118399861
NCBI-ProteinID:
XP_052330519
LinkDB
All DBs
Position
21:complement(18474962..18650349)
Genome browser
AA seq
1320 aa
AA seq
DB search
MGLSCSCGLRRRYQGLKVLSQFLRGQLILDGVRQPLVESGDQCLCIPPTLGGEVSHWSGP
LADVEQLAGCFSSADWVVKNPLAVKANMELQEGGYCSHTAVANAKAMPEKLMSSVMPQPQ
QREEGEEEDEEQGFVDSADEEKEPVDYVPVSDPRRRVSGPVELVEPSAGTPSVGEQAQGG
SGPGEALPVEKQTDWEDHSVEIPKESSSLREHSEEDVTDAEAEADAEPQTGILEVIYDDV
PCEGPLSPDEGDMLYEDVHREERPQGAGNDWSSSDFESYEEQSDTESKLPTLSKVGEMYS
PYLRWLRERCARTKREIVMRLGGKNNYNTKVHQLMKAARSGTKDGLDKTRIAFMRKVSFL
HKKDHSEDVEDDAGYLDVAVSDVKHPPAQLSPMPEGLSSQQVVRRHILGSIIQSERSYLE
SLRRILEEYQSPLLEANPRILSPRKIQPVFYRLREITQCHSMFQIALASRVAEWDSSEKI
GDLFVASFSKSMVLDVYSDYVNNFTNAMALIKKACXKPAFLEFLKMKQASSVDRITLYGL
MVKPIQRFPQFILLLQDMLKNTPKGHVDWLPLQLALTELEMLAEKLNAQKRVSDQIAETQ
QLARSVSDRSLSKQLNSDQGSLVLCKTLIETVYGEQGQVLKSKERKVFLFNDILICANIN
VKGPLDISSLVPVGPKYTVKWSAPLLQVQVVEVGQEASQETLFQHGGAKHPGIACPPGKV
ILGPPRLYQELKDLQHDLSVVEEVTLLVGTLQGTYQNLNTTVAQDWCLALQRLIRIKEDQ
LQSANKCRLRLQVPGRPDKSGRPVSFMVVFNTTSPLSKISWVNRLHLAQIAQREENTPGW
FCAEDEVKTMSPFWPLLACRVPVFSTKSSDRKFEAALHNPGQFSAGCTLLPEGYLWVASG
GDVDQGQVEIFSLNRPTLRPVKSLQVGAPVRCLEYVPEPRPSEEVEAVSFKSSTGVGNTI
CLGLDDGSILVYGSVNTEAQCLLNLRNPHSCPVLCLRHCTNFLFAGLRDGTMMVYGRSNG
GELWEPDSSRTVIVGPEPVRTLLVLEDSMWASCANSVTIIEGSSLATQMLQCLSVEQVNR
RALTKGHPNSSPSPHHMGRGQKSMRVTSLLIHQGLLWVGTVQGIIITLPVPKLEGIPKIT
GKGMTSLNAHCGPVDFLVATSSTLSPELLKRDSWADGPNSACGEEDRSYSSSQESLPQSG
SSQGRXGKGRGVLLQYTLRSTSGLPGRPLTVRGDEASDSSLESLEHSLEDGSIYEFSGDP
EMWVQGRPSERDGGSRDRVISAAVISGGRGFHRLREGTTERAGVESSETTLMMWELPLTV
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgtcatgctcctgtgggctcagacgtcgttatcagggactcaaggtcctctcc
cagttcttgagaggccagctcatccttgatggagttagacaacccctggtggaaagcggt
gaccagtgcctctgtattccacccactctcggtggcgaagtcagccactggtctggcccc
ttggcggatgttgaacagttggctggctgcttctcatccgccgactgggtggtcaaaaac
ccgttagcagtgaaggctaatatggagctgcaggagggtggctactgttcccacactgct
gttgccaacgccaaggcaatgcccgagaagcttatgtcctctgtgatgcctcagccacaa
cagagggaggaaggggaggaggaagatgaagagcaagggtttgtcgacagtgctgatgaa
gagaaagagccagtggattatgttccagttagcgacccacgcaggcgggtctctggcccc
gttgagctggttgagcccagtgccggaacaccctccgtgggagagcaggcccagggaggt
tctggtcctggagaggcgttacctgtggagaagcagactgactgggaggaccatagtgtg
gagatacccaaggagagctcaagtctgagggaacactctgaagaagatgtgactgatgct
gaggctgaggctgatgcagagccccagacagggatcctagaggtgatctatgatgacgtg
ccctgtgagggaccactctctcctgacgaaggggacatgctctatgaggatgtgcacaga
gaagaaaggccacaaggtgcaggcaatgattggagctccagtgattttgagagctacgaa
gagcagtctgataccgagagcaagctaccaaccctcagcaaggtaggagagatgtactct
ccttacctgcgttggctgagggagcgttgtgccaggaccaaacgtgaaatagtcatgagg
ctgggtggcaaaaacaactacaacaccaaggttcatcagctaatgaaggccgccaggagt
gggaccaaggatggactggataagaccagaatagcctttatgcggaaagtctccttcctg
cacaagaaggaccactcagaggatgtggaggatgacgcagggtacctggatgtggctgtg
tcagatgtgaaacatcctcctgcacagctgagccctatgcctgagggactgagcagccag
caggtggtcagacgtcacatcctgggctccatcattcagagtgagcgcagttatcttgaa
tccctcaggagaatccttgaggagtaccagagtcccttgctggaggcgaacccacgcatc
ctgagcccacggaagatccagcctgtattttaccgcctacgggagatcactcagtgtcac
tccatgttccagatcgcactggcgtcacgtgtggctgagtgggacagcagtgagaagatt
ggggacctatttgtggcctcgttttctaagtcgatggtgctagatgtttacagcgactat
gtcaataacttcaccaatgccatggccctcataaaaaaggcatgtnccaaaccagccttc
ctggaattcttaaagatgaaacaggcgtccagtgttgaccggatcaccctgtacggcctc
atggtgaagcccatccaacgctttccccagttcatcctattactgcaggacatgctgaag
aacacacctaagggtcacgtagactggctgcctctgcagctggctctgactgaactagaa
atgttggctgagaagctgaatgcacagaagcgtgtgtccgaccaaatagctgagactcag
cagctagcacgcagtgtcagcgaccgctcgctcagcaagcaactgaactcagaccagggg
tcgctggtgctttgtaagacactgattgagacggtgtatggggagcaaggccaggtcctg
aagtctaaggagcgcaaagtcttcctcttcaacgatatcctcatctgtgccaacatcaac
gtcaaggggccccttgatatcagcagcctagtccctgttggtcctaagtacaccgtgaag
tggagtgcccccctgctgcaggtccaggtagtggaggtgggtcaggaggcctcccaggag
accctgttccaacacggcggtgccaagcaccctggcattgcctgtcccccagggaaagtg
atcctgggtcctccacggctttaccaggaactcaaggacctgcagcacgacctgtctgtg
gtggaggaggtcacactactggtgggaacactacaggggacataccagaacctgaacacg
actgtggcccaggactggtgtctagctctacagagactcattcggatcaaggaggatcaa
cttcagagtgccaacaagtgccgcttacgcctgcaggtgcctgggagaccagacaagtcg
ggacgtcccgtcagcttcatggtggttttcaacaccaccagccccctcagcaagatctcc
tgggtcaaccggctgcacctggcccagattgcgcagcgagaggagaacacaccaggatgg
ttctgtgcagaggatgaagtgaagaccatgtcaccattttggcctttactggcctgccgt
gtgcctgtctttagcaccaaatcctcggacaggaagtttgaagctgcccttcacaatcca
ggacaattctctgcagggtgcaccttgctacctgaaggctacctctgggtggccagcgga
ggagatgtcgaccaggggcaggtggagatattctccctgaacaggcccacactgcgccca
gtaaagagcctccaggtgggggccccagtgaggtgtctggagtatgtgcctgaacctaga
ccctctgaggaggtggaggctgtatccttcaagagctctactggggtggggaacaccatc
tgtttgggactagatgatggaagcatcctggtgtatggcagtgtgaacactgaggcccag
tgcctgttgaacctgcggaaccctcatagctgccctgttctatgcctcagacactgcacc
aacttcttgtttgctgggctcagggatggaaccatgatggtctatggaagaagtaatgga
ggtgagttgtgggagccagactccagcaggactgttattgtgggcccagagccggtgagg
acacttctggtactggaggactctatgtgggccagctgtgccaactctgtgaccatcatc
gagggctccagccttgccacccagatgctccagtgtctcagtgtggaacaggtgaataga
agagccctcactaaaggccatccaaactcctcccccagcccgcaccatatgggccgaggc
cagaagagcatgcgtgtcaccagcctgctcatccaccaggggctgctgtgggtgggcact
gttcagggaatcatcatcactctgcccgtgcccaaactggagggcatccccaaaataaca
ggaaaggggatgacctctctgaatgcccactgtggtccggtggacttcctggtggccacg
tccagcaccctgtccccagagctactgaagagggattcttgggcggacggacccaactct
gcctgtggagaggaggaccgcagttactcctcctcccaggagtctctgccgcaatcaggc
tcctcccaggggaggnggggcaaggggcggggtgtgctgctacagtacacgttgcgctcc
acttcggggttgccagggcgaccgctaacggtgaggggcgatgaagcatcggactcctcc
ctggagtctttggagcacagcctggaggacggctcaatctatgagttcagtggtgaccca
gagatgtgggtgcagggacgcccctctgagcgggacggggggagcagggacagagtgatt
tcggcagcggtcatatctgggggcaggggtttccacagactgagggaagggacaacggag
cgggcgggggtggagtcttcagaaacaaccctgatgatgtgggaactaccactgacagtg
tga
DBGET
integrated database retrieval system
