Oncorhynchus keta (chum salmon): 118399956
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Entry
118399956 CDS
T09424
Symbol
smpd2b
Name
(RefSeq) sphingomyelin phosphodiesterase 2 isoform X1
KO
K12351
sphingomyelin phosphodiesterase 2 [EC:
3.1.4.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00600
Sphingolipid metabolism
oke01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
118399956 (smpd2b)
Enzymes [BR:
oke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
118399956 (smpd2b)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
118399956
NCBI-ProteinID:
XP_035652110
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All DBs
Position
21:complement(3763527..3779293)
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AA seq
442 aa
AA seq
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MADSNTIRLRVFSLNCWGIRYLSKHCRERYAMIGELLSREEHDIVLLQEVWSEKDFLCLK
RKLSSTHPHSHYFKSGVIGSGMATFSRHRIHDAFLYRYSLNGYPYMAHHGDWFGGKAVGM
VILNIGRLAAHVYVTHLHAEYCREKDSYLPHRVVQAWELQQFIRHTSSGADLVILAGDLN
LHPQDLGNRLLRTYTGLRDSYTETAKFDGCEDGITLIADNPFINPKELCPFEKGIRIDYI
LYKGSGRVSIQCESLSTTKGSVPDHPFPYSDHEALSADLQLQTLTPQAGGDETRGEQDCA
AGKLAELVDIVTEARTEVKVGLYCAERMRYTAARTGVMGMALLLLELAIAAVPWLALRAD
QPFPRASFYLLGVLCFAILITTFLLYIFYSMEVKALQGAEDQMRLAVGSLQERLRGFPLA
QPLNRLCRPLEGQDPCPLEPEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagcaacaccatcaggctccgagtcttctccctcaactgctggggtatccgt
tacctcagcaagcactgtcgggagcgctacgccatgatcggagagcttttgagcagagaa
gagcacgatattgtcctgctgcaagaggtctggagtgaaaaagacttcctctgcttgaaa
aggaaactttcctctacccatccgcactctcattacttcaaaagtggagtcataggcagt
ggaatggccacgttctccagacatagaatccatgacgcatttctctaccgctattcgtta
aacggctacccatacatggcccaccatggagactggtttggaggcaaggctgtggggatg
gtcatattaaacataggcagactggcagcacacgtctacgtcacacatctgcatgcagag
tactgcagggagaaagactcctacttacctcatagagtggtacaggcctgggagctgcag
cagtttattcgtcatacctccagtggagcagacctggtgattttggccggagatctgaac
ctgcatccccaggaccttggcaaccggttgctacggacatacactggcctccgggacagt
tacacagagactgctaagtttgatggctgtgaggacggcatcactcttatagcagataac
cctttcatcaatcccaaagagctctgcccctttgagaagggcatcagaatagattacatc
ctctacaaggggtcaggaagagtgtccatccagtgtgagtctctgtcaaccaccaagggt
tctgtccctgaccatcccttcccttactctgaccacgaggcccttagcgcagacctgcag
ctgcagactctgaccccacaggcaggaggagatgagaccagaggtgagcaggactgtgct
gcaggtaagctggctgagctggtggacattgtgacggaggcccgtactgaggtgaaggtg
ggcctgtactgtgctgagaggatgcgctacacggcagctcgtaccggggtgatgggcatg
gccctgctgctgttggagctggccatcgctgctgttccctggctagccctgagagctgac
cagcccttcccccgggcctccttttacctattgggggtgctgtgctttgccatcctgatc
accaccttcctgctctacatcttctactccatggaggtgaaggctctacagggggcagag
gaccagatgaggctggctgtggggagcctccaggaaaggctgaggggattcccccttgcc
caacctctgaaccgcctctgtaggccactggaaggacaggacccctgccctctggagcca
gaggaatag
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