Oncorhynchus keta (chum salmon): 118400029
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Entry
118400029 CDS
T09424
Name
(RefSeq) PR domain zinc finger protein 2-like isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00310
Lysine degradation
oke01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118400029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118400029
03036 Chromosome and associated proteins [BR:
oke03036
]
118400029
Enzymes [BR:
oke01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
118400029
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118400029
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118400029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2HC_2
zf-C2HE
zf-C2H2_11
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
118400029
NCBI-ProteinID:
XP_035652255
LinkDB
All DBs
Position
21:complement(7262716..7279990)
Genome browser
AA seq
1758 aa
AA seq
DB search
MAVPEGTMETLADIPHHVWKSLPDGLRLSPSAVDQSRIGVWASRSIPKGKRFGPFVGEKK
KRSQVSSNVYMWEVYFPARGWMCVDATDPMKGNWQRYVNWANSTQEQNLFPMEINRAIYY
KVLRPIGPGDELLVWYNGEDKPEITAALEEERGSSLSKKNPPRAKRARRKLLEGARQAGL
GAFRGPKQTGVTKPILKEMWDTEEGPNEEDERLSQSPRPSKGTRESSPMGRNGLSQAQFI
SAAMRGEAEEDDEEEDPGDLQQPLSLTQQSAQSATEAEPEERSEQPDLPLSHSSPVEEGP
GSLQHHTETASSLPRAEPEADPDPDPDLEGDPHGEESHPCQHCERHFSTKQGLERHTHIH
ATANQQTHTFKCRYCGKSFGSQVGRRRHERRHENGPKNKGQRPGSLAGTATLLTPLGQAG
GSSPDCGTVSGHYVVRGSPIPGGPMGSLEVVRKDPAAESDRPFIVDENGETKELHPCKYC
NKAFGTHTNMRRHQRRIHERHLLPKGVRRKGMLLQESPSQQQLHHLPEQSPSVSPPLVYV
PSADTEDEGDREEYLVDIANNISENLSLYIDGKILSTSSVSGCEVIEVDSSSAALFGLDA
VVISPNQISQTLKVDTRTCAVRQVSNLGQPMSKRRTSTPPLMPSPKMESETGSSSASSSS
STSSSSALLVGSVFPQSSDSLAFQKEKTIYLSPKLKQLLQTQTDSQKPAIALIAERHRLA
PPLSVTSLPAASGRFKRRTASPSSPQLSPALKANGCMNEAGVSSYTLKVPNLETLGMSPA
WSLSSKEERDTLSPSGKNGCSWSASRTGGNSCNQQPLDLSSGISKRRDSFNKTPGEVVLD
LSMSRKSTAESKGSPSPAQPPTKKKKPNTSMLEKVLMNEYAGLNPAEEEGSSPLGSPDSQ
YTAGSGTGTASHSPSSNLPSESAHPSPPSLTPVTMNPSSPCGSSLTSPTPPPPVLPTMPS
PDCPTLISSLPVLSHKMPPRSIDQGEDEPVGVSNSTTAETMLAAVSNSYGDEEHINKPID
SNPDPLTKEAISSPSTEPSLVSDAVALSLSSTQSKPARTGNQLDVQVNQDLEPIITEGQE
KSQCSELPVLSSVTESLLSASSTSPAAISDIPAPPAVSPPSLSSTVIKGDPQHSEQLADL
VLSPSGTGSSPLSAAADKPSSLSEEEEGSPPEPFSKSFVCNVCEDPFRAIKELSRHILEH
AAEWPYKCEFCVQLFGNAPALLEHRTALHGVGRVFVCSVCSKEFAFLCNLQQHQKDLHPS
QLCTHTAVENGKPRPQNYTDPARAKEESNPSSTVATGPESSPEVASSQGVSDVKKEEPDT
NGKHEEDGLEYLTEELYTTIKIMASEGGKPKGPDVRLGINQHYPSFKPPPFPYHNRTAAG
SVASATHFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPKKNPIP
LRQIVKPQNGSLSPASAANAGHNAFRRMGQPKRLNFNQEPLGKTKMSSLGKKSQLVQKAI
GQRNETAATVNKAPSQVKQEEPQEQEVHLCPHCSREFTYPASLNKHIAGSCPMKPVSKKA
KKGAATEATPAVDKNMSLRRRTTDSEIQQPEPAEPVPKTLSKTRARNSGPGPAEAPPPVG
KGKMAATQVCTKRPASFPAATVSLGKKSKKGKVQSLPPTPLPSESPSDSALRPAAQTKQR
MGKEVPPKKGAEVKSPPQQQSQVPPKKEGERFSLRARERAVGPVTRSLQMANTAAPVEVK
TDDLSSQEPEETQEYLLK
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcctgaagggacaatggaaacgcttgctgacattccacaccatgtgtggaag
agcttgcccgatggcctgagactaagcccctctgccgttgatcaaagtcgaattggtgtc
tgggcctctaggtcgattcctaaaggcaagaggttcggcccttttgtaggagagaagaaa
aagcggtcccaggtgtccagcaatgtatacatgtgggaggtgtattttccagccaggggc
tggatgtgtgtggatgccacagaccccatgaaggggaactggcaacggtatgtaaactgg
gctaactccactcaagaacagaaccttttccccatggagataaaccgagccatttactac
aaagttttacggccaattgggccaggggatgagctgctggtgtggtacaatggggaagac
aagcctgagataacagctgcactagaggaagaaagaggcagcagtctgagcaagaaaaat
ccacccagggcaaagcgagccagaagaaagctgttggagggagcaagacaggctggtttg
ggtgcattccgtgggcccaagcaaacaggcgtaaccaaacctattctcaaagagatgtgg
gacacagaggaaggtccaaatgaggaagacgagagactctcccaatcaccaaggccttcc
aaggggactcgggagagctcccccatggggaggaacggcctctctcaagcccagttcatc
tcagcagcaatgagaggggaagcggaggaggatgatgaagaggaagacccaggggatctg
cagcagccgctgtcactgacacagcagagtgctcagtctgctactgaagctgagccagag
gagaggagtgagcagcctgatctgccactaagccatagcagcccagttgaggaggggcct
gggagccttcagcatcacactgagactgcctcatccctaccaagggctgaaccagaggca
gaccctgaccccgaccctgacctggaaggtgacccccacggagaggagtcccatccctgc
cagcactgcgagcgccatttctccaccaaacaggggctggagcgccacacacacatccat
gccaccgcaaaccagcaaacgcacacgttcaaatgccgctactgtggcaagtccttcggc
tcgcaggtggggcgtcggcggcacgagcggaggcatgagaacgggccaaagaacaaaggc
caaaggcctggctcactagctgggactgctactttactcactcctctggggcaggctggt
ggttcgagcccagactgtggcactgtctctggccactatgttgtcaggggctcccctatc
cctggaggacctatggggagccttgaggttgtcaggaaggaccctgcggctgagagtgac
cggccgtttatcgtggatgagaatggtgagacaaaggagcttcatccctgcaagtactgt
aataaggctttcggcactcacaccaacatgcgcagacaccagcgcagaatccacgagcgc
cacttactgcccaagggtgtccgcaggaaaggcatgctgctgcaggagagcccatctcag
cagcagctgcatcatctgcctgaacagtcccctagcgtcagcccacccctcgtttatgtg
cccagtgcagacactgaggatgagggggaccgagaggagtacctggtcgacatagccaat
aacatctcggagaatctcagcctgtacatcgacggcaagatcctgtccactagttcagtc
agtggctgtgaggtgatcgaagtggactccagttctgcagcactgtttggtcttgacgca
gtggtcatcagccccaatcagatcagtcagactctcaaagtggataccaggacatgtgct
gtgaggcaggtctcgaatctcggccagcccatgtcgaaaaggagaacgtcgacacccccg
ctcatgccaagtcctaaaatggagtctgaaactgggtcctcttccgcctcctcttcctcc
tccacgtcttcctcatccgccttgttggtgggaagtgtcttccctcagtcctcagactca
ttagcatttcaaaaggagaaaactatctatctgtctcctaagctcaaacagctcctccag
actcagacagacagtcagaaacctgccattgccctgatagcagagaggcacagattagct
ccccctctctccgttacgtctctgcctgcagcctcaggcaggttcaagagaagaacagct
tccccctcatctccacagctcagccctgcgctgaaagcaaacggctgtatgaacgaggcg
ggggtctcatcgtacaccctcaaggtgccaaatctggagaccctgggcatgtcccctgcc
tggagtctgtccagcaaggaggagagggacacactgagtcccagcgggaagaacgggtgc
agctggtctgcctctcggaccggagggaactcgtgtaatcagcagcccttggatctgtcc
agcggcatcagtaagaggagggacagcttcaacaagacgcccggggaggtagtgctggat
ttaagcatgagtcggaagagtacagcggagtctaagggaagtccatctccggcacagccc
cccaccaagaagaagaagcccaacaccagcatgctagagaaggtgttgatgaacgagtac
gccggcttaaacccagcagaagaggaaggctcttctcccctgggaagcccagattctcag
tatactgcaggcagtggtacaggtaccgcatctcacagtccctcttccaatctgccctct
gaatcagcccatccctctcccccctctctaacgcccgtcacgatgaacccctcctcccct
tgcggctccagcctgacctctccaacgccacctccccctgtcctacccaccatgccctca
ccagactgccctacgctcatcagctctctccctgtcctctcccacaaaatgccccccaga
tctatcgaccaaggtgaggacgagccagttggcgtatcgaactctaccacagcagagacg
atgttagctgcagtaagtaacagttatggagatgaggaacatatcaataagccaatagac
tctaatccagatccccttaccaaggaagctatttcaagcccctctacagagccctccttg
gtatctgatgctgtcgctctgagtctgtcctcaacacaatcgaaacctgctaggactggg
aaccagctggatgtccaagtgaatcaagacctggaaccgattattactgagggacaggag
aaatcccaatgctctgaactccctgtattatcatccgtaacagaatccctcctctctgcc
tcatcgacctcgcctgctgccatatcggatatcccagctccaccagcggtctccccgcca
tctctctctagcactgtgattaaaggggatccccagcacagtgaacagctggctgactta
gtcctttctcctagtggcacagggtcttcacctctgtctgctgctgctgacaaaccctcg
tcgttgtcggaggaggaagagggatcgccgccagagcccttcagtaagagctttgtgtgt
aatgtatgtgaggaccccttccgcgccatcaaagagctcagtcggcacatcctagagcac
gctgctgagtggccctacaagtgtgagttctgcgtgcagctgttcgggaacgcccctgct
ctgctggagcaccgcacggccctccacggcgtggggcgcgtctttgtctgctccgtctgc
tccaaggagtttgccttcctctgcaacctccagcagcaccagaaggacctgcatcccagc
cagctgtgcactcacacagcggtggagaacggcaagcccaggccacagaactacacagac
ccagccagggccaaagaggagagtaacccctcctcaaccgtagccacagggcctgagtcc
tctcctgaagttgcttcctcccagggggtctctgatgtgaagaaagaggagcctgatact
aacgggaagcatgaggaggatggactggagtacctaactgaagagctgtacactactata
aagatcatggcctctgagggaggcaagcctaaaggcccagacgtacgcctgggcattaat
caacactaccccagtttcaagccaccccccttcccctaccacaaccgcactgctgcaggc
tctgtggcctcggccacccacttcactacccacaacatcccccagacattcagcactgcc
atccgctgcaccaaatgcggcaagagtttcgacaacatgcccgagctgcacaagcacata
ctagcctgtgccaacgccagtgataagaggcggtacactcccaagaagaaccccatccct
ctgagacagatagtgaagccccagaacggctctctgtcgcctgcctctgcagccaacgca
gggcacaacgctttccgcagaatgggccaacccaagaggctcaacttcaaccaagaaccg
cttggcaaaaccaagatgagttccctcggtaagaagagccagctggttcagaaggccatc
gggcagaggaatgagactgcagctactgttaacaaggcccctagccaggttaaacaggag
gagccgcaagagcaggaggtccacttatgccctcactgcagccgagagttcacctaccct
gccagcctcaataaacatatagcaggcagctgtcccatgaagccagtctctaagaaggcc
aaaaagggagccgcaacagaggcaacaccagctgtagacaaaaacatgagccttcgacgg
agaaccacagactctgagatccagcagccagaaccggctgagccggttcccaaaacgctt
agcaaaactcgggctcgcaactctggacctggccctgctgaggccccaccaccggtaggt
aaaggaaagatggctgccacacaggtgtgcaccaagaggccagcctctttcccagcagcc
acagtttctctcggcaagaaaagtaaaaaaggcaaagttcaatcgttacccccaaccccg
ttgccctccgagagtcccagtgactctgcactgcggccagcagctcagacaaagcaacgc
atgggcaaggaagtgccacccaagaagggagcggaggtgaaatcgcccccacagcagcag
tctcaggtgccgcctaagaaagaaggggaacggttctctctgagagcgagggagcgagct
gtcgggccggtgacccggagcctacagatggccaacactgcagctcctgtggaggtgaaa
acagatgacctctccagccaggagcctgaagagacccaggagtacttgctgaagtga
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integrated database retrieval system
