Oncorhynchus keta (chum salmon): 118400066
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Entry
118400066 CDS
T09424
Name
(RefSeq) contactin-4-like isoform X1
KO
K06762
contactin 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118400066
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
Contactins
118400066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_C17orf99
V-set_CD47
Sp38
C2-set_2
Tissue_fac
Ig_5
C2-set
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
118400066
NCBI-ProteinID:
XP_035652353
EnsemblRapid:
ENSOKEG00005048342
LinkDB
All DBs
Position
21:complement(8231761..8404451)
Genome browser
AA seq
1029 aa
AA seq
DB search
MTLLWKLLLLQSLMGCLAESSVLQSPVFTKQPGSIVFPVDSQEKNREVVFSCEAQGSPSP
LYRWKLNGTAITPKSVSHYSLSGGNLRISHLDKDQDAGTYQCLAFNSFGTIVSREASLTF
AYMENFKTHRRSSVSVREGQGVVLLCGPPSHSGDLTFSWIFNEYPSFVKQDTRRFISQET
GNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGIMGEYEPKIEVQFPEIVH
VAKGSTVKVECFALGNPVPSINWRRMDGIPFSRKVDVRKASGVLEIPYFQQEDAGTYECV
AENSRGRNTVKGKLSFYAPPHLIEKPQDVQKPIDDSLVWECKATGKPKPSYRWMKNGENL
ESLEERIQVANGLLSISRLTLSDIGMYQCVAGNKHGEVYSNAELKVIAVAPDFSQSQLRS
HTMVKEGGDVLMECRPKMSPWGGISWRKGSETLQESNRVSILDNGNLRIQNATKPDAGLY
TCVARNQFGVASSSGTLMVKEPTIITTPPSTLDVTVGESIVLPCQVTHDPSLELKFTWFF
NEQLIHFGDHGGYFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIAADLVVRG
PPGPPTSIHVEEISDTTASLSWRPGPDNHSPVTTYTIQARTPFSLGWQAVTTVPEMVGGR
RLTATVIDLSPWVEYEFRVLASNAIGTGEPSKPSKQARTKETSPKVTPANVSGGGGSRSE
LVITWEPVPEELQNGGGFGYVVAFRPYGATGWMQAAVPSSEASKYVFKNDSIQPFSPFQV
KVGVYNNEGEGPFGPVITIYSAEEEPGRAPTRIRAKSLSASEIEVSWKALPWNTSKRRVL
GYELRYWEKREKEEAASVQRTVGNQTSAIIRGVRGSNTYYVTVRAYNTAGAGLPSVTVNV
TTKKPPPSQPPAKVMWNTLNSKIILNWEQVKALENESEVTGYKVLYKRNRHSRPSVMETN
TTSVELSLPMDEEYFIQIKPFGEGGEGSSSRQITIPRIPGPNAIGSATKVSTLSALSTIA
LSFTARTSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgctatggaaactgctgttgctgcagtcactcatggggtgcctagcagagagc
agtgtcctgcagagcccagtattcaccaagcagcctggcagcattgtgttccctgtggac
tcccaggagaagaacagagaggtggtgttcagctgtgaggcccagggaagcccatctcca
ctttatcggtggaaactgaatggcaccgcaatcactccaaaatcagtctcacactacagc
ctgtctggaggcaacctccgaatcagccatttggacaaagaccaggatgctggaacatat
cagtgcctcgccttcaactcttttgggaccatcgtgagccgagaggccagtctaaccttt
gcatacatggaaaacttcaagacccacagaagaagctcggtgtcagttcgcgagggacag
ggggtggtgctgctgtgtggtcccccatctcactctggagatctgacgttctcctggatt
tttaatgagtacccctcatttgtgaagcaggacacgcgtcgctttatctcccaggagact
ggaaatctatacatcgctaaagtggagccttctgatgtgggcaactacacctgtgtggtg
accaacactgtcaccaagaccagggtccaaggcccgcccactcctctggtgctgcgcagt
gatggtataatgggtgaatacgagccaaagatcgaagttcagtttccagagattgtccat
gtagccaaaggatcaacagtgaaagtggagtgttttgcattaggaaaccctgtcccctcc
ataaactggaggagaatggacggaatccccttttctaggaaggtggatgtgaggaaagcc
agtggcgtcctggaaatcccctatttccagcaggaagacgcgggcacatacgagtgtgtg
gcagagaactccagggggaggaacactgtaaaaggaaaactctctttctacgcccctcca
catctgatagagaaaccccaggatgtgcagaagcccattgacgactctctggtgtgggaa
tgcaaggccactggaaagcccaagccctcctataggtggatgaagaacggagagaacctg
gagtcactggaggagcgcatacaggttgccaatgggctgttgtcaatcagccgactgacg
ctgtccgatattggaatgtatcaatgtgtggctggaaacaagcatggggaggtctactcc
aatgcagagctcaaagtcatagctgttgccccagatttctcccagagccagctgaggagc
cacacaatggtgaaggagggaggagatgtgctgatggagtgcaggcccaaaatgtccccc
tggggtgggatctcttggaggaagggcagtgagactctacaagagagcaacagagtttcc
attctggacaacggaaacctccggatacagaatgcaaccaaaccagatgcaggtctttac
acatgtgtggcacgaaaccagtttggagtggcaagcagctccggtactctcatggtcaaa
gagccgaccattataaccacgccaccgtccaccctggacgtgactgtaggagagagcatc
gtgctgccgtgtcaggtgactcatgacccgtctctagagctcaagttcacctggttcttc
aacgagcagctgatccactttggcgaccacggcggatactttgaaaaagtgggaggtcag
cattccgctggggacatcatgattcggaacatccagctgagacacgcagggaagtacacc
tgtgcagtgcagaccaaggtggacagcatctccatcgcagcagacctggtggtcagaggt
cccccaggcccgcccaccagcatccatgtagaagaaatcagtgacaccacagcctctctc
tcctggaggcccgggcctgataatcacagtccagttacaacatacaccatccaggccagg
acaccattctccctgggctggcaggctgtcaccacagttcctgagatggtggggggccgc
cgcctgacagctacagtaatagacctgagcccctgggtggaatatgagttcagagtcctg
gcaagcaatgccattgggaccggggagcccagcaaaccatccaaacaagcaaggactaag
gaaacatctccgaaggtcacaccagctaatgtaagcggaggtggaggcagtcgctcagaa
ttagtgatcacttgggagcctgttcccgaggagctgcagaacgggggagggtttggctat
gtggtagccttcagaccgtacggcgccacaggctggatgcaggccgcagtgccctcatcg
gaagcatccaaatatgtcttcaagaacgatagcatccaacccttctcccccttccaagtg
aaggttggagtgtacaacaacgagggggaaggccctttcggacccgtcatcaccatctac
tctgcagaggaagagcctggcagagcgcccaccaggatccgagccaagagcctgtctgcg
tctgagattgaggtttcatggaaagccctgccttggaacaccagcaagagaagagtccta
ggctatgagttgaggtactgggagaagagagagaaggaggaggcagccagtgtgcagaga
acggtaggcaaccagacatcagccattatccgaggggtgagaggaagcaacacgtactac
gtcacagtgagagcatacaacacggccggggcagggcttcctagtgttactgtcaatgtc
accaccaagaaaccaccgcccagccagcccccggcgaaggtcatgtggaacacattgaat
tccaagataatcctgaactgggagcaggtcaaagccctggagaacgagtcagaggtcaca
ggctacaaagtgctctacaagcgtaaccgacatagccgtccgagtgtcatggaaaccaac
acaacatcggtggagctttccctgcctatggatgaggagtacttcatccagatcaaacca
tttggggagggaggagaggggagcagtagcagacagatcacaatccccagaataccaggt
cccaatgcaattggctcggcgaccaaggtctctactttatcagccctcagtacaatagca
ctgtctttcacagcgcggacatcgttatga
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