Oncorhynchus keta (chum salmon): 118400089
Help
Entry
118400089 CDS
T09424
Symbol
traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118400089 (traip)
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118400089 (traip)
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118400089 (traip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_11
zf-RING_Vps41
zf-C3HC4_4
WEMBL
Gp58
zf-RING-like
RING_XB3-XBAT31
zf-RING_16
Zn_ribbon_8
MAD
Crescentin
Uds1
T3SSipB
zf_RING_Vps8
KxDL
Fez1
ATG14
RINGv
AAA_13
Aminoglyc_resit
Baculo_PEP_C
zf-Nse
SLX1_C
Lzipper-MIP1
CC4_CEP85
Motif
Other DBs
NCBI-GeneID:
118400089
NCBI-ProteinID:
XP_035652437
LinkDB
All DBs
Position
21:10733518..10751147
Genome browser
AA seq
455 aa
AA seq
DB search
MPIRAYCTICSDFFDHSRDVAAIHCGHTFHYECLLQWFQTAPNKTCPQCRKQVSTRHIIN
KLFFDIGGEGEGSSADPECLQNELDRMKAVLSTKERDWGDRLKMVEGLKETVDRQKKDLD
IVRKEIGEKDMLCSVLRKQMKYLENQQSETQAAKEEARRLRTKMKTYESLDVVLQGQRAE
VESMISDMGVGQAAMEELSIYCISLKKEYENLKGSLRYSNEMSEKLKREVFASNNKLQKA
TMEMNRTNDDMKAVQNDLTNADKEITSLKKKVEILQKTLSTPTRTNEALSRLVFESPAPV
QLQQPRLHQPANSEDIDLNMTFDVTTPDLVDKRASQVPSKKMRLDPATLSSSPTKHRDSA
SFGSKAREEEVPMGTFFRNSILFRKKTFGSMLDPQRSKLGAVRSGYDGLGGRTKFFQPSP
LSEIRPLMMKAKRKKVSRPAPAKISTCLTLDSYLE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcctattcgtgcctactgtaccatctgttcagatttcttcgatcactccagagatgtg
gctgccatccactgtgggcacaccttccactatgaatgtcttcttcagtggtttcagact
gcccccaacaagacatgtccacaatgtagaaaacaggttagcaccagacacattatcaac
aagttgttctttgacattggtggtgaaggagagggatcctctgcggatccagagtgtttg
cagaacgagctcgatagaatgaaagctgttttaagtaccaaagagagagactggggggac
agactgaagatggtagagggcttgaaggagactgtggacaggcagaagaaagacttggac
attgttcggaaggagattggcgagaaagatatgctctgctcagttctcaggaaacagatg
aaatacctggagaaccagcagagtgagactcaggctgctaaggaggaggcccgacgactt
aggaccaaaatgaaaacatatgagagtctggatgtggtgttacagggtcagagggctgag
gtggaatccatgatcagtgacatgggtgttggccaggctgccatggaggagctctccatc
tactgcatctctctcaagaaagagtatgagaacctaaaagggagcctcagatattcaaat
gaaatgtctgaaaagctcaaaagggaggtgtttgcttcaaacaacaagttgcagaaagcc
acaatggagatgaacaggaccaatgatgacatgaaagctgtccaaaatgacttgaccaac
gcagacaaagagatcactagtctgaagaaaaaagttgagattcttcaaaagaccctgagc
acaccaacccgcactaacgaagccttgagccgactagtcttcgagagccctgccccagtg
cagctgcaacagccccgtctccaccagcctgccaacagtgaggacattgaccttaacatg
acctttgacgtcaccacacctgacctggtggataagagggcgtcacaggtcccatccaaa
aagatgcgtctggatccagccacgttgtcgtcctcaccaaccaaacaccgtgacagcgcc
tcgtttggaagcaaggccagagaggaggaggtgccaatgggtacattcttccgtaactcc
attctgttcaggaagaagacctttggcagcatgctggacccccagaggagtaaactggga
gctgtcagaagtggttatgatggacttggagggagaaccaaattcttccaaccttctcct
ttgtcagagattcgcccgctcatgatgaaggcaaagagaaaaaaggtttcccgaccagct
cctgccaagatctccacctgtcttactctggacagttatctggagtga
DBGET
integrated database retrieval system
