Oncorhynchus keta (chum salmon): 118400096
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Entry
118400096 CDS
T09424
Name
(RefSeq) CXXC-type zinc finger protein 1-like isoform X1
KO
K14960
COMPASS component SPP1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118400096
03036 Chromosome and associated proteins [BR:
oke03036
]
118400096
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
118400096
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
118400096
COMPASS/SET1 complex (yeast)
118400096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
Motif
Other DBs
NCBI-GeneID:
118400096
NCBI-ProteinID:
XP_035652454
LinkDB
All DBs
Position
21:complement(10848161..10857954)
Genome browser
AA seq
579 aa
AA seq
DB search
MDSEVSDFEPAPGLVSTMEGEKAPVYCICRKPDINCFMMAHICFPCSGCDNCNEWFHGNC
INLTEKMAKAIRQWYCLRCQDDNPSLEIKYRPKKSREKEPESQRESERNFERQNSTPDYK
SEKCRGSNVKRSARMCGECEPCLRTEDCATCDFCKDMKKFGGPNKIRQKCRFRQCDVRAR
KMLRVKDEEFNLRERRDNSYHRRRRYSDDYDSEAELYEKYKAAGYDENMPWLSNEEDGPP
FSPVRRKKAVKVKHVKRRENKFDKKRESRRHKQKQKHKDKLRHNNKGDARDGGGQRQCLG
PSCVEAACANSKYCSEECGIKLAANRIFEILPQRIQQWQQSPCVAEEQGKKQLERIRRDQ
QNARIRLTDMEKRFHELEGIIAKAKQQVVQQDEEANEGDNEETDLLIFCVSCSHPINPKV
ALRHMERCYAKYESQTSFGSMYPTKIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPK
VPGDEVCGCPLVRNVFEVTGEHCRVSKRKCNKHYNWEKLRRAEVDLERVRVWYKLDELFE
QERNMRTAMTNRAGLLALMLHQTIQHDPLTTDLRCNKDR
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgaagtgtcagacttcgagcctgcaccggggcttgtgagcactatggagggg
gagaaggcaccggtgtactgcatttgtcgaaaacctgacatcaattgcttcatgatggct
cacatctgttttccttgtagtggttgtgacaattgcaatgagtggtttcatggtaactgc
atcaatctcacagagaagatggccaaagctatcaggcagtggtactgcctgcgatgccaa
gacgacaacccatcattggagataaaataccgtccaaagaagagccgtgaaaaggagcca
gagagccagagagagtcagagagaaattttgaaagacagaacagcactccagattataaa
tctgaaaagtgccgtggatcaaatgttaagcgctccgctcgtatgtgtggggagtgcgag
ccctgcttgaggactgaggactgtgccacatgcgacttctgcaaggatatgaagaaattt
ggtggtcccaacaaaataagacagaagtgtcgatttaggcagtgtgatgtccgagccagg
aaaatgttgcgtgtgaaggatgaagagtttaatttgcgtgaaaggagggataattcctac
caccggcgaagacgatattcagatgactacgatagtgaggcagaactctacgaaaagtac
aaggcggcaggatacgacgaaaacatgccatggctcagtaatgaggaggacggccctccc
ttcagccctgtccggcgaaagaaagctgttaaggtcaagcatgtgaagagacgtgaaaat
aaatttgacaagaaaagagagtcacggcggcacaaacagaagcagaagcacaaggacaaa
cttcggcacaacaataagggcgatgccagagatggaggaggacagcggcagtgcctcggg
cccagctgtgttgaggcagcatgcgccaactccaaatactgctcagaggaatgtggcata
aagctggctgccaaccggatctttgagattctccctcagcgtatccagcagtggcagcag
agcccctgcgtcgctgaggagcagggcaagaagcaactggagcggatccggagggatcag
cagaacgcccgcatacgcctcaccgacatggagaaacgcttccacgagctggagggcatc
attgccaaggccaagcagcaggtggtccagcaggatgaggaggcgaatgaaggggataat
gaagaaacagatctgctgattttctgtgtgtcctgcagtcaccctatcaacccaaaagtg
gcattgcgacacatggagagatgttatgctaagtatgagagccagacttcttttggttcc
atgtacccaactaagatcgaaggagcaacaagactgttctgtgatgtgtacaatccccag
agcaagacctactgcaagaggcttcaggtcttgtgcccagagcattccagggacccaaag
gtcccaggggatgaggtgtgcggctgtcctctggtccgtaatgtgtttgaggtgacggga
gagcactgcagggtttctaagcgcaaatgtaataagcactacaactgggagaagctcaga
agagccgaggtggacctggagcgtgtccgagtgtggtacaaactagacgagctctttgag
caggagcgcaacatgaggactgctatgaccaacagggcaggtctacttgctctcatgctg
caccaaaccattcagcacgacccactgacaacggatctccgttgcaacaaggacagatag
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