Oncorhynchus keta (chum salmon): 118400100
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Entry
118400100 CDS
T09424
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03083
Polycomb repressive complex
oke04980
Cobalamin transport and metabolism
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118400100
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
118400100
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118400100
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118400100
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118400100
03029 Mitochondrial biogenesis [BR:
oke03029
]
118400100
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118400100
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
118400100
HMT complexes
COMPASS/SET1 complex
118400100
MLL-HCF complex
118400100
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
118400100
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
118400100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
118400100
NCBI-ProteinID:
XP_035652463
EnsemblRapid:
ENSOKEG00005045195
LinkDB
All DBs
Position
21:10942611..10956625
Genome browser
AA seq
1666 aa
AA seq
DB search
MTGSALQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTATNQW
FIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKKLKAKTPK
NGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSVVGWDI
PITYGVLPPPRESHTAVVYTEKDSKKSRLIIYGGMSGCRLGDLWTLDIDTLTWTKPSVNG
TAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMAWESV
VMDTLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETERPHAPSR
VQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPAATAVTSPALNAATSLQGNLPKGPAT
AAPSAQNLPHTGITIVPQASSPTILPNIPRSPLAASTAHGPAILKVAAPPSGTGTSLVTV
RPNQAGKSPVTLLPGVRMVVPAQTAQGTPVGSSPQMSGMAALAAAAAATQKIPPSSSTVL
NIPAGATLVKTMAGGSTTVKMASPLMVSNPATRMLKTAAAQVGTATVSSPNSPNRPIITV
HKSGTVTVAQQHQVVTTMVGGVTKTITLVKSPLTMGGSGTLQISNLGKMMSVVQTKPVQT
SAVTGQASTNPLTQLIQTKGSLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNIS
GMSPTITKQGTTIIKTIPMSAIMTQPGATVTSSTGKTPYTIISTKMMTTGTPGKIITTMP
KLGTATGQQGLTQVVLKGAPGQPGTILRTVPMGGVRLVTPVTMSSVKPNITTLVVKGTTG
VTTLGTVTGTVSSSLAGSIVASANASLATPITTLGTIATLSSQVINPTAITVSAAQTSLT
TATTLSASTMSANQPTQVTLITTPSGVEAQPVQDLPVSFLASPTSEQPSSTEVGDVPGTV
TVVCSNPPCETHETGTTNTATTASSDIGGVQRVCSNPPCETHETGTTNTTTTASTNMGGA
MRTSTSSSPGTATGNQGPENLSTGTTFTPTTACSNMGSAQTGTVQSPKPAVGSTMCLNPP
CETHETGTTNTATQSLSSMGNGQTGTVQRVCSNPPCETHETGTTSTPSQASSNMAGNQTG
TAQRVCSNPPCETHETGTTNTATTATADGADSATSSTETPSTTASETTPATIQSRAITTV
TQSTPAPGPSVPSILSITEGAAGSTEEPMQTDAATEGGETAMETGLSPELSEGQMGTGLS
AEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMNEGDSGSTGQQAITIPIVLTQ
QELAALVQQQHQLQEAQAQAQAQALAQQQGNAQALPTEGLAPADSLNDPASESNGHPEMA
AAVSSAVASLLPRTSTETLAPSSTFSVASPAKLQAAVAEVANGIEGGKLNPQPAPIKTLV
KKENQWFDVGIVKVTNMVVTHFIPEDDSQVEDDSGAIPDHNQMKKMELQPGTAYKFRVAG
INACGRGFFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLA
IQSTQTAEPKASTPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEK
GYGPATQVRWLQESSKDGASAKLAPKRPVSSPDAKAAGQKKARTDP
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgactggttcagctctacagccacgatggaagcgggtactgggatggtctggccctgtc
cctcggcccagacatggtcacagagccgttgctataaaggaattgatggttgtttttgga
ggaggaaatgaaggaattgtggatgagttgcatgtctacaacacagcaacaaaccaatgg
tttatccctgcggttcgtggtgatattccccctggatgtgctgcatatggttttgtttgt
gatggcacccggcttctggtgtttggtggaatggtggaatatggaaaatacagcaatgat
ctctatgagctacaggccagcagatgggaatggaaaaagttgaaagctaagactcccaaa
aatggcccacctccctgtcctcgacttggccacagtttctcgctggtgggtaacaagtgc
tacttgtttggaggactggctaatgacagcgaggaccccaaaaacaacatccccagatac
ctgaatgatctgtacaccctggagcttcgtgctggctccagtgttgtgggctgggatata
ccaattacttatggtgttttgccacctcctcgcgagagccacactgccgtagtgtacaca
gaaaaggacagcaagaaatctcgcctgatcatctatggagggatgagtggctgtcgtctg
ggagatctatggacacttgacatcgacaccctgacctggactaagccatcagtgaatggc
acagcacctctgcccaggagtcttcactctgccaccaccatcacaaacaagatgtttgtg
tttggggggtgggttcccctggttatggatgatgtgaaggtggccacacatgagaaggaa
tggaagtgcacaaacacactggcctgcctaaatcttgactccatggcctgggaatcagtg
gtgatggatactctggaggacaatatcccaagggcccgggcaggacattgctcggtggcc
atcaactctaggttgtatgtctggagtggccgtgacggttaccgtaaagcatggaacaac
caagtctgctgtaaagacctctggtaccttgaaacagagaggccacacgctccctcgaga
gtgcagctagtccgtgccaacaccaactccctggaggtaagctggggcgctgtgtccact
gcagacacctatctgctgcagctacaaaagtacgacattcctgctgccactgctgtgacc
tcgccggccctcaatgccgccacctctctgcaagggaacttgcctaagggcccagccaca
gctgctccctctgctcagaacctaccacacacaggtatcactattgtgccccaggcttct
tcccctacaatccttcccaacattcccagaagcccgctggctgcctccacagctcatggg
ccagctatcttgaaggttgcagcgcctccgtctggcacgggtacctcccttgtcactgtg
cgacccaaccaggctggaaaatcccctgtcacacttcttccaggagttcgcatggttgtt
cctgcccagaccgcccaaggaacaccagtcggcagcagccctcagatgagtggcatggca
gctttggctgcagctgcagcagccacacagaagatcccaccttcttcaagcactgtactc
aacattccagcaggtgccacccttgtcaaaaccatggctggcggctccaccacagtcaaa
atggcatctcctctcatggttagtaacccggccactcgcatgctgaaaacagctgcagct
caggtgggcacagcgaccgtatcgtcacccaactcgcccaacaggcctatcatcactgtg
cacaagtcgggcacggttaccgtagcccagcaacaccaggtggttaccaccatggtggga
ggagtcaccaagaccatcaccctggtcaagagccccctcacaatgggaggcagcggcact
ttgcagatctccaaccttggcaagatgatgtctgtggtacaaaccaagccagtgcagaca
tcggctgttacaggccaggcttccactaaccctctcacacagctcatacagaccaagggt
tctctccctgccggcaccatactgaagctggtgacctcagcggacggcaagcccaccacc
atcatcaccacatcccaggcgggaggaaccgggaacaaacccaccatcctgaacatcagc
ggcatgtcgcccaccataaccaaacagggtaccaccatcatcaagaccatccctatgtct
gctattatgacccagcctggagccacagtgaccagcagcacagggaagacgccctatacc
atcatcagcaccaagatgatgaccactggcactccaggcaaaatcatcactaccatgccc
aagcttggcactgcaactggccagcaagggctgacacaggtggttttgaagggagccccg
ggccaacctggcaccattctgcgcactgtacccatgggtggagtcagactcgtcaccccg
gtcacgatgtcttctgtcaagcccaatataactacactggtcgtcaagggaacaactggt
gtcaccaccctggggactgtcacagggacagtctcctccagtctggcagggagcattgta
gccagtgccaatgcctctctggcaactccaatcaccacccttggcaccatcgccaccctg
tccagccaagttatcaaccccactgccatcactgtgtcagcagcccagaccagtctgacc
acagctactaccctttccgcttccaccatgtcagcaaaccagcctacccaggtgactctc
atcaccacccccagcggggttgaggcccagccagtgcaggacctgcctgtgtccttcctg
gcctcccccacctctgagcagccttcttccactgaggtcggggatgtccctggcactgtc
accgtggtctgctccaaccccccctgtgagacccacgaaacaggaaccaccaacaccgca
accacagcctcctccgatataggtggggtgcagagggtctgctccaaccccccctgtgag
acccacgagacgggcaccaccaacaccacaacgaccgcctccaccaacatgggcggggca
atgaggacgagcacctcttcttcccccggaaccgccacaggcaaccagggaccagagaac
ctgagcaccggcaccacattcacccccaccacggcatgctccaacatgggctcagcccaa
accggaactgtgcagagtcccaagccagccgtgggctctactatgtgcttaaacccaccc
tgcgagacacatgaaacaggcacaaccaacactgccactcagtccttgtccagcatgggt
aatgggcagactggcactgtacagagggtgtgctcaaacccaccctgcgagactcacgaa
actgggaccaccagcaccccgtcccaggccagctcaaacatggccggaaaccagacgggg
acagcgcagagggtgtgttccaaccccccctgtgaaacccacgagactggcaccaccaac
acggcaactactgccacagcagatggagcagacagtgccaccagcagtacagagactcct
tccaccactgcatcagaaacaaccccagccaccatccagagcagagccatcactactgtg
actcaatccacaccagccccggggccctcagtaccttccattttgtcgatcactgagggt
gctgcgggttccacagaagagcccatgcagacagacgcggccacggaggggggagagacc
gctatggagactgggctgtccccagagctgtcagagggacagatggggacaggtctgtct
gcagaggagctggctgtgaccgcagcggcggaggcagcggcgcaggctgcagccacagag
gaggcccaggccctggccattcaggcagtcctccaggcagcacagcaggcagtcatgaac
gagggtgattctggctcgaccggacagcaggccatcacaatccccatcgtcctgacccag
caggagttggcagccctggtccagcagcagcaccagctccaggaggctcaggcccaggct
caggcccaggctctggcccagcagcaaggaaatgcccaggccctacccactgagggcctt
gcccccgcagacagcctcaacgaccctgcgtctgagagcaacggacaccccgagatggct
gcagctgtctccagcgctgtggcatcactgctgccgcgcacatccactgagaccctggcc
ccctcaagcacattttctgttgccagtccagccaagctacaagctgctgtagcagaggtg
gccaatggcattgagggtgggaagctaaaccctcaaccagcccctatcaagactcttgta
aaaaaagagaaccagtggtttgacgttggcatcgtcaaggtgacaaacatggtggttacg
cacttcatcccagaggacgattctcaagtggaggatgactctggtgccatcccagaccat
aaccagatgaagaaaatggagctgcagcctggcacagcctacaagttccgtgtcgctggt
atcaacgcttgtggtcgtggtttcttctcagagatatctgcttttaagacctgtttacca
ggcttccctggagcaccttgtgccattaaaatcagcaagagcccagatggtgcccacctc
acctgggagcctccctctgtgacatcagggaagatcattgagtactctgtgtacctggcc
atccagagcacccagacagctgagcccaaagcctccaccccagcccagctggccttcatg
cgggtgtactgtgggcccaacccctcctgcttggtgcagtcctccagcctctccaatgcc
cacatagactacaccaccaagcccgccatcatcttccgcatagctgcgcgcaacgagaag
ggctacggccctgccacacaagttcgatggctgcaagagtccagcaaagatggagcctcg
gcaaaacttgccccaaaaagaccagtttcctcgcctgatgctaaggctgctggtcaaaag
aaagcaagaacggacccgtga
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