Oncorhynchus keta (chum salmon): 118400112
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Entry
118400112 CDS
T09424
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04217
Necroptosis
oke04622
RIG-I-like receptor signaling pathway
oke04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
118400112
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118400112
04625 C-type lectin receptor signaling pathway
118400112
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118400112
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118400112
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118400112
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C67
118400112
Ubiquitin system [BR:
oke04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118400112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
zf-HIT
Motif
Other DBs
NCBI-GeneID:
118400112
NCBI-ProteinID:
XP_035652489
LinkDB
All DBs
Position
21:complement(11107547..11116512)
Genome browser
AA seq
719 aa
AA seq
DB search
MEFKGDGKEQFFIVTRGKVRKGFSRGCIGRVEAVMHKGELMGLLYGGGSSGNPKSGDMVK
REDTYPLTRHQAQLLLFVSPSSKRLELLCNPQLFSAICVLSQDDLVVVKHKKGHQPGLVR
NLMLIGKKENQGDLLMLGFEVEFVDSDQTVSPKKPAPLPLFSAADIVQVVPAYSVGIGPR
WKDSYSEGLNRKAVPPIISMSNMGSRGRQVRGINHLDQNVTQTPTQSPSHQPFEVGSMVE
VTSNTGITVYGVIRWMGVLSENKNDWAGIELDYEVNNCSDGTYGGQQYFTCKGGRALFVP
LTKCSPDGRFFCPPSEKETLKATDIPPVIPLEETDENVPPIPESEALSLLVGKMKGIQGH
YNSCYLDATLFSLFCSSMTLDSVCHKPDGTEKSISRSLKKDIVNRLRRQGFVPAESVMNF
RKQLGCDTFVTEEKDPEEFITILLQRVLCMKSLLKLRSNDDTSQDAYTFQIILDKEQVTQ
TPTVQQLLDISLLSCGLKFEEIPSCLMVHMPRFGKKYKMFPYIIPSTEFDITDLLYNSPR
ECFLCGRLAEYECPQCLQDRKLQPGRIKQYCTTCKTQVHIHPSRQSHCPKALAVPAEVPA
DAPVPRHKMQLFAVLCIHTSHYVSFVKYGPGPRSWLFFDSMADRCGEINLKEHSYNVLPK
VCGHLLFEHLIPKSWASIWSWSPLCWYNSLHSSEKMLEHWGGVRRTDLLERWHPMTVPR
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaaaggagatgggaaggaacagttcttcatagtgacacgggggaaggtgaga
aaaggcttctccagaggatgcatcggccgtgtggaagcagtgatgcataagggagagctg
atgggactgttgtacggaggtggcagcagtgggaatcctaagagcggggacatggtgaag
agggaggacacgtaccccctcacccgacaccaggcccagctgctgctcttcgtgtccccc
tccagcaaacgcctggagctcctgtgtaacccccagctcttttcagccatctgtgtactg
tctcaggatgacttggtagtggttaagcacaagaaaggtcaccagccaggcctggttcgg
aacctgatgctgatcggtaagaaggagaaccaaggggacctgctgatgctgggctttgag
gttgagtttgtggactctgatcaaacagtgtcccctaagaagccagctcctctccccctg
ttcagtgcagcagacattgtccaggttgtcccagcatactctgtaggcattggccctcgc
tggaaagacagttattcagagggtctaaacagaaaggcggtgccacctatcatctccatg
tctaatatgggatctcgtggacgacaagtgagaggtatcaaccatttagaccagaatgtc
acccaaaccccaacccaaagcccgtcacaccaaccttttgaggtgggatccatggtggag
gtaacatccaacactgggataactgtatacggggtgatccggtggatgggcgtcctttca
gaaaataaaaatgactgggccggaattgagctggattatgaggtgaataattgctcagat
gggacgtatggaggccagcagtatttcacttgtaaagggggcagggccctgtttgtgccc
ctcacaaagtgcagtccagatggaaggttcttctgtcccccctctgaaaaggagaccctg
aaagcaacagatatccccccagtcattccattggaggaaacagatgagaatgtccctcct
atccctgagtcggaagccctgtctttgcttgtgggcaagatgaaggggatccaggggcac
tataactcctgctacctcgacgccactctcttcagtctgttctgctcatctatgaccctg
gacagtgtttgtcacaaaccagatggcacagaaaagagcatatctcgctctctgaagaaa
gacattgtcaaccgtttgcgcagacaaggttttgtgcctgctgagagcgtaatgaacttc
cgcaagcagctcgggtgtgacacctttgtaacagaagagaaagaccctgaagagttcatc
acaatccttctacagcgggtgctttgcatgaagtcattgcttaaactcaggtcgaatgac
gacacatctcaggatgcctacacattccagattattctggataaggagcaggtgacacag
actcccactgtccagcaactcctggatatctccttgctgtcttgtggcctcaagtttgag
gagatcccatcctgcctcatggtccacatgccaaggtttgggaagaagtacaagatgttc
ccctacattatcccctcaacagaatttgacatcacagatcttctatacaactccccccga
gaatgcttcctctgtgggcgtttggcagagtacgagtgcccccagtgcctacaagaccgc
aagctccagccaggaagaatcaaacagtattgtactacctgcaagacacaggtgcacatt
catccctctcggcagagccactgccctaaagccctggcagtgccagcggaggtgccagca
gatgcccctgtacccaggcacaaaatgcagttgttcgctgtgctctgtatccacaccagc
cactatgtgtcctttgtaaagtatggccctggccctcgctcctggctcttctttgatagc
atggcagacagatgtggtgagattaacctcaaagaacacagttacaatgtattaccaaaa
gtatgtggacacctgctcttcgaacatctcattccaaaatcatgggcatcaatatggagt
tggtcccccctttgctggtataacagcctccactcctctgagaagatgttggaacattgg
gggggggttagaagaactgacttgttggaaaggtggcatcctatgacggtcccacgttga
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