Oncorhynchus keta (chum salmon): 118400147
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Entry
118400147 CDS
T09424
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118400147
Membrane trafficking [BR:
oke04131
]
Endocytosis
Others
Others
118400147
Endosome - Lysosome transport
118400147
Endosome - Golgi transport
118400147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GBP_PSP
DUF6085
Motif
Other DBs
NCBI-GeneID:
118400147
NCBI-ProteinID:
XP_035652576
LinkDB
All DBs
Position
2:complement(38228174..38292627)
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AA seq
1246 aa
AA seq
DB search
MVISGSVWCWAILTCVLSSFYNMLTAYAEINWPASSTTTNVWLNRVDTLPLELRTNLKSV
WVKIPKYIVKESAFSRAFKMEPIDGKPAVPKGGGRLPKDLKRVIGKVTPDAISSGRDKTA
PNRSKYFTDDRKKSDRFFDVNGGTLALSNRTKRSTADGEYSDRSQIGGPGDAFSAEKLLE
PFGVYSPRTEYRRTGEDARTGPRQSESLLVTSTFPLTGDSAHNQAMGHWVGDNSSVILTL
TKQYDFNLGAFTESSLWRSVDYGSTYIKLNNKVGSTLACLYVCPTNKRKIMMLSDPELEH
SVLISSDEGASFEKHPINFYMDGLLFHPTQENWLLASSPDNKVYSTMDFGRKWQLVSENV
TPGRFFWAQTGLDREADMVHMETHIAKGRAQYVTCRAQRCTESNRQYLFPGHIDQNSLVV
QDNYVFVQVTKSGQASYFVSYMRESFKQIQLPKYCLPKDMHIISTDKKQVFAAVQEWNQN
DTYSLYISDSPGVYFTLSLENLRTRREPGGNVLVDMYKVEGINGIFFANKLVDHEVKTFM
TYNKGQTWALLQAPNTDVAGNSLHCILPFCSLHLHLDMPVNPYLPGRIFSKDSAPGIIVA
TGNIGTELSSTSLGMFITSDAGNSWRQIFEEELGVWFLDNGGALVAVSLVATVPIRHIWI
SLDEGKKWDRHSFSLVPLFLDGALMQPENHIITFTGHLSRISEWQLIKIDYKAIFSRRCM
DGDYQTWNLHNKGEPCVMGEKQTFMKRRPGNRCVLTQDYSRVISSEPCICRAYDFECDYG
YERQADGKCSPAFWFDPNTVPRSCSTSQNYLNSTGYRKVLSNNCKEGGKDVYSPRKQDCS
PRPPRGLRLTTSHGDLTANLGSNITFVVHLDDGNSLWTHIQLDFGDGITVMYNLSRRGDG
IKHSYRAPGIFRVTAHAENSQGYDSSSMFLHITSPVERVYLSAPIVAIRKKRANLTAVVW
PVHQRTLTFFWWFENSSESLITLGGSIAYTFQKEGMNRVVVQVSSGCNILQDTKVIIVKE
FFKSLLLSFSPTLDEHNPDIPEWREDVGRVVRTAVSQVSGFPEEQLLVSLFPGVPTTAEL
FILPETQLSEHGKENEEGLVSISDILINALNQGLIQFELKPDTQIIVYITQLTSAPLVDS
NPIHSSSAMLMLLSVAFVGLVAFFIFKFKRKIPWIHVQAEENQEKEPERIGTVRQNNTMS
KMKHSEFPSEKELTEKEKELEARTRGENGRNGERVITREFPTCTNV
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggtcatctcaggttcagtttggtgttgggctattttgacttgcgttttaagctctttt
tacaatatgttgacagcatacgctgaaataaattggccagcgagttccacaacgacgaac
gtttggcttaaccgtgttgatacattgcctttggagctgcgcacaaacctaaagtccgta
tgggtcaaaatcccaaagtatatcgtcaaggaatctgccttttccagagcttttaaaatg
gaaccaattgatggaaaaccggcggttccaaaaggtggagggagattaccaaaggacttg
aagagagttattggaaaagtgacacctgatgctatatcttctggcagagataaaactgcg
ccaaaccgttccaagtattttacggatgacagaaaaaagtctgaccgtttttttgacgta
aatggcggcacacttgctttaagtaaccgtacaaagcgaagtacagccgacggcgaatat
tcggacaggagtcaaattggaggtcctggtgacgcattttcagccgagaagcttttggag
ccttttggtgtttatagtcctaggacagaataccgacgaactggggaagacgcaagaact
ggtccgaggcaaagtgagtcgcttctggtcacctctactttccctctaaccggagactct
gcgcacaaccaggcgatggggcactgggttggagacaacagcagcgtgatcctgaccttg
acgaagcagtatgactttaacttgggtgctttcactgagagttctctctggagatcagtg
gactatgggagcacttatattaaactgaataataaggttgggtcaaccttggcttgcctc
tacgtctgcccaaccaacaagagaaagataatgatgcttagcgacccagagctggaacac
agtgtactcatcagctcagatgaaggtgccagcttcgagaagcaccccattaacttctac
atggacggtctgctgtttcatccaacacaggaaaactggctgctggctagcagtcccgac
aacaaagtgtacagcacaatggactttggaaggaaatggcagttggttagtgagaatgtg
actcctggacgattcttctgggcacaaacgggactggacagagaggcagatatggtccac
atggagacccacatcgccaaaggacgtgctcagtatgttacgtgccgagctcaacgatgc
acagaatcaaacagacagtacctgttcccgggacacatagaccaaaattctctggttgtt
caggacaactatgtgttcgttcaggttaccaagtcagggcaggcgagttactttgtgtcc
tatatgagggaatcattcaaacaaattcaactccccaaatactgtcttcccaaggacatg
cacatcatcagtacagataagaagcaggtgtttgcggctgtacaggagtggaaccagaat
gacacctacagcctgtatatctcagactctccaggggtctacttcactctgtctctagag
aacctccggaccagaagagagccaggcggaaatgtactggttgacatgtataaggtagaa
ggaataaacggcatattttttgccaacaaattggtggaccatgaagtgaagactttcatg
acctataacaagggtcagacctgggccctgctgcaagcccctaacactgatgtggctgga
aacagtctgcactgcatcctgccattttgttctctgcatctgcacctggatatgcctgtg
aacccttacctgcctggacgcatcttcagtaaggactcagcaccagggatcatcgtagcc
acaggcaacattggtacagagttgtcctccactagccttggaatgtttataacatctgat
gctggcaatagctggagacagatatttgaagaagaacttggtgtttggtttcttgacaat
ggaggtgctttagttgcagtgtctttagttgcaacagtacccatccggcacatatggata
agtctggacgagggtaagaaatgggatcgtcacagtttctctctggttcctttgtttctg
gatggagctcttatgcaaccagagaatcacatcatcactttcactggacacttaagtcgt
atttcagaatggcagctgataaagattgactacaaagccatcttcagcaggagatgcatg
gacggagattatcagacttggaacctacataacaagggagagccatgtgtgatgggagaa
aagcagacctttatgaaacggaggccagggaaccgctgtgtgctgacccaggactactcc
cgagtcatatcctcagaaccatgcatctgccgggcctatgattttgaatgtgattatggg
tatgaacgtcaagctgatggaaagtgttcacctgctttttggttcgacccaaatacggta
ccaagaagctgtagcactagccagaattacctaaatagcacagggtacaggaaggttttg
tctaataactgcaaagagggaggaaaggatgtgtactcccccaggaaacaggattgttcc
cccaggcctcccagaggcctcagactgaccaccagccatggagacctcaccgccaacctg
ggcagtaacatcaccttcgtggtgcatctggacgatggaaactcgttgtggacacatatc
cagctagactttggggatggcatcacggtcatgtacaacctgagccggagaggcgatggg
atcaaacacagctatagagcacctgggatcttcagagtgacagcacatgctgagaacagc
cagggatatgacagcagctccatgttcttacatatcaccagcccagtggagcgtgtgtat
ctctcagctcctattgtggcaatcaggaagaagagagccaacctaactgctgtggtctgg
cccgtccaccaaagaacactaacctttttctggtggtttgaaaacagctctgagtcttta
ataaccttgggtggaagcatcgcgtacacgtttcagaaggaaggcatgaacagggtcgtt
gtccaggtgtcttctgggtgcaacatactgcaggataccaaggtcatcattgttaaagag
ttcttcaaatccctgctgttatcattctctccgactttggacgagcacaaccctgacatc
cctgagtggagagaggatgtgggccgtgtggtgaggacagctgtgtcacaggtgtctggg
tttccagaagagcagctgttggtatcattgtttccaggtgttccaacaacagcagaacta
tttatcctgcctgagactcagttgtctgaacatgggaaagagaatgaagagggcttagtg
agtatatcagacattcttataaatgccctgaaccaaggattgatccagtttgagttgaaa
cctgacactcaaataattgtttacatcacacagctaacttcggcacctctggtcgattcc
aatccaattcacagtagctcagccatgctgatgttgctatctgtggcgtttgttggttta
gttgcattcttcatcttcaagttcaaaaggaaaatcccttggatccatgtccaggctgag
gagaaccaggaaaaggagccggagaggatcggcacggttaggcagaacaacaccatgtcc
aagatgaagcacagtgagttcccctcagagaaggaacttacagagaaagagaaagaactg
gaggccaggaccagaggagaaaatggaagaaatggggagagagtgatcacaagagagttt
cctacttgtactaatgtctaa
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