Oncorhynchus keta (chum salmon): 118400199
Help
Entry
118400199 CDS
T09424
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 3-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118400199
03012 Translation factors [BR:
oke03012
]
118400199
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118400199
mRNA cycle factors
Stress granule specific factors
118400199
Translation factors [BR:
oke03012
]
Eukaryotic type
Initiation factors
eIF-4
118400199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
PP_kinase
Motif
Other DBs
NCBI-GeneID:
118400199
NCBI-ProteinID:
XP_035652692
LinkDB
All DBs
Position
21:complement(17291965..17375592)
Genome browser
AA seq
1811 aa
AA seq
DB search
MSLPTKIVPKPTTVAVSGPGTVPSPSSQLRATLTSVSLPPGAPGAPQSNAVPPPQIFLNM
TRPRIPRVQPSLDDRIFPTQPGVTAVYSVPRHPGPPYTAHDITKGHPNLAGTPPGHAHSP
ALSQVSVPTASPYRYPKGWEASGGSPYTTGQNAGSTPLVYSPQTQQMNAQPQSRPSSMPS
PSPSPPVIWNHQFATGPRPTHHQGGFRPIQFFQRAQMQTARPTIPTNTSSLRPGSQNPTA
AVYPPNQPTMMMMAPMPFPSPQAAQYYIPQYRHSTPYVGPPQPFSVQPPGSGTFYPGPGP
GEYPAQYAPGPQFYPGQQVYPPSPPIIVPTPQQPPPAKREKKPSSQIRIRDPNQGGRDIT
EEIMAGGTGSRNPTPPVGRPSSTPTPPQFLWPHPHYPHIFYLKSQQQPSGSQTPEQGQGQ
AHPAYSLEPPKQQQPTPGAADSKPGPVYDKPKLEPVIRKPSSPGIGQPEPSMAWREASAP
VTAPSPPVEKELPSPAPVMVAPIPAPRPVASPNPIEQPSAVEPATPTPSAAEPKTLPPTT
HSQTPNTVEPLPEAPHTLAASPTLTPKALNGHADTGAELDTQAQEPSPLDPSPPQPQAST
PAFREDCSEAVPSEVRAEIPPAVTDSIAPITVVPVTLTSKPAPAFPAPPPGLPPLVQATA
EASKPADTKDVPLKAGTEAFITPDNKPEPQLQALSRKSPTTGYQAAPDAPKTWKKPNEKS
PVGDAQQRETEEELKPLEEAAGDQALPPARSCSTSPLPSAAPSALEAEEMPPAPEENGEA
EPMRNGAGHTSETESSDSGATPGDNEGSTGAPPDLFQEDLETNGKRQYKRDFLLGFQFMA
ACTQKPDGLPQISDVVLDKINQNKLPTRAVESRVISRGPDFTPAFADFGRQMSGGRGGAA
VSHTHSQAHQMMNMGGGARRPPPRKIILNVSANEEVQLKKAENAWKPGMKRAGPSDDPEV
IITQELFRKVRSILNKLTPQMFNQLMKQVTDLTIDTEERLKGVIDLVFEKAIDEPGFSVA
YGNMCRCLTTLKVPMTDKPGTTVNFRKLLLNRCQKEFERDKVDDVVFERKQKELDSAQSS
DQERLRLELEEAKDKARRRSIGNIKFIGELFKLKMLTEAIMHDCVVKLLKNHDEESLECL
CRLLTTIGKDLDFEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVIDLRLHNWVSRRA
DQGPKTIEQIHKEAKIEEQEEQRKVHQQLLSKDTKRRPEQQQQQREQQREQQREQRVQQR
DETWNTVPMTKNSRTIDPTKIPKISKPQMDEKIQLGPRASLNWMKGSSGGAKASDSELSR
SGGGGGASLNRYSALQSTQSHQTTPPAQNLEYDTRRTLGSRSSAGRERSEKPLSPAPSRP
GSFVRGGSAKELLESPALSPEEPRRELESPSVSEDKTEPERSSAREPVKAEPVVAQSPDR
PALSEEEMERKSRAIIDEFLHINDYKEAVQCVDELDMSSQLHVFVRVGVESTLERSQITR
DHMGKLLFQLVQQDILAKSQFFKGFADTLELADDMAIDIPHIWLYLAELLSPVLRDRGFS
MRELFSELSKPLLPVGRAGILFSEILHILCKQMSHRKVGTLWRESGLSWSDFLPEGEDVQ
DFISEQKLQFTEADCSSHEAALATTALSPVVLNQQLERLLLEDMASDEQIFDWVEANLDE
SQMSSSPFLRALMTAVCKAAVKDESASCRVDVAIIQRRLPVLLKYLNSDTERQLQALYAL
QALIVTLDQPPNLLRMFFDCLYDEDVISEDAFYKWETSKDPAEELGKGVALKSVTAFFTW
LREAEEESEDN
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccgacgaaaatagtcccaaaacccaccactgtcgcagtaagtggacctgga
actgtcccgtctccgtcgagccaactgcgggctaccctgacctccgtgtctttaccaccg
ggagccccaggtgctcctcagtcgaacgccgtgccgccacctcaaattttccttaatatg
acgcgtcccaggatccctcgggttcagccatccctggatgaccgcatcttccccacacag
cccggcgtcactgccgtctacagcgtaccgaggcatcctggtcctccctacacggctcat
gacatcacaaagggacaccctaacttggcgggcacaccgccagggcatgcccactcaccg
gcgctctctcaggtatcagtacccacagcttccccatatcgctaccctaagggctgggag
gcaagcggagggtctccatacaccactggacagaatgctggctccacacctctagtgtat
tctcctcagacccagcaaatgaatgcacagccacagagtcgcccgtcatccatgcccagc
cccagccccagcccccctgtcatatggaaccaccagtttgcgacgggccctcgaccaacc
caccatcagggaggattcaggcccatccagtttttccagagggctcagatgcagacagcg
cggccaaccatccccaccaacacttcatctctgcggcccggctctcagaaccccacagcg
gcggtatacccccccaaccagcccaccatgatgatgatggcccccatgcccttcccctcc
ccacaggctgcccagtactacatcccacagtatcgccacagtacgccctatgtggggccg
ccccagccgttttcagtgcagccgccggggtctggcaccttctatcctggccctgggcca
ggggagtaccctgctcagtatgctcccggacctcaattctatccaggacagcaggtgtac
cccccctcaccccccatcatagtgcctacaccgcagcaacctccaccagccaagcgtgag
aagaaaccatcctcccagatccgtatccgtgaccccaatcagggaggcagggacatcaca
gaggagatcatggcagggggcacagggagccggaatccaactccccctgtcggacgaccc
tcctccacccccacccctccgcagtttttatggccgcaccctcattatcctcacattttc
tacctcaaatcgcagcagcagccgagcggcagccagactccggagcagggccaaggccag
gcccacccagcctacagcctggagccccccaagcagcagcagcccacgcctggggctgca
gacagcaaaccagggccagtatatgataagccaaaattggagccggttatccggaagcct
tcctctcccgggattggacaaccagaaccttctatggcgtggcgagaggccagtgcacct
gtaactgccccatctccccctgtagaaaaagagcttccctctcctgccccagtgatggtg
gcacccatccctgcccctcgtcctgttgccagccccaaccccattgagcagccctctgca
gtggagcctgctactcccactccctctgcagctgagcccaagaccctgcctcccacaact
cattcccagaccccaaacacagtggagcctcttccagaagccccacacaccctggctgct
tcccccaccctaaccccaaaagctttgaatggccatgctgacactggggctgagctggac
acccaggcccaggagccctcccccctagatccctccccaccccagccccaggcttcaacc
ccggccttcagagaagactgtagtgaggctgtgcccagtgaggtgagagcagagatcccc
cctgctgtcacggactctatcgcacccatcactgtagtgccagtcactctgacctccaaa
cctgcgcctgcttttccagcacctccccctggccttccaccactagtgcaggccacagcg
gaggccagcaagcccgccgacactaaagacgtccctctcaaagcagggacagaggcattc
ataacaccagacaacaagcctgaaccacagctacaagccctctccagaaagagtcccact
acaggatatcaggctgctcctgatgcaccaaagacctggaagaaaccaaatgaaaagagt
cctgttggagatgcccaacagagggagactgaggaggagctcaagcctttggaagaggct
gctggagaccaggccctgccacccgccaggagctgcagcacctcacccctaccctcagca
gctccctcagccctggaggcagaggagatgcccccagcccctgaggaaaacggggaggct
gagcccatgaggaacggagcaggacacacctcggagactgagagcagtgacagcggggcc
acccctggggacaatgagggctccacaggagcccccccagacctcttccaggaagatctg
gagactaatgggaagcgtcaatacaaacgggacttcctgctgggctttcagttcatggct
gcctgtacacagaagccagacgggctgcctcagatcagtgacgttgtgctggacaagata
aaccaaaacaagctgccaacccgggcggtagaatccagggtgatctcccgaggccctgac
ttcacaccggcctttgctgactttggcagacagatgagtggaggacgcggcggagctgca
gtgagtcacactcactcccaggctcaccagatgatgaacatgggggggggtgcccggcgg
cccccgcccaggaagattatcctgaacgtgtcagcgaatgaagaggtgcagctgaagaag
gctgagaatgcctggaaacctggcatgaagagggcggggccatcagatgaccctgaggtc
attataacacaggagctcttccggaaggtgcgcagtatcctcaacaaactgacacctcag
atgttcaaccagctgatgaagcaggtgacagacctcaccatcgacacggaggagcgcctc
aagggcgtcatcgacctggtctttgagaaggccatcgacgagcccggcttctctgtggcc
tacgggaacatgtgtcgctgcctcaccacgctcaaagtgcccatgacggacaaacccgga
accacagtgaacttccgcaaactgctgctcaaccgttgtcagaaggagtttgagcgggac
aaggtggatgatgtggtgtttgaaaggaaacagaaggaacttgactctgcacagtccagt
gatcaagagagactacggttagagctggaggaggccaaggacaaggcccgccggcgctcc
atagggaacatcaagttcatcggggagctgttcaagctcaagatgctgacagaggccatc
atgcacgactgtgtggtcaagctgctgaagaaccatgacgaggaatcgctggagtgcctt
tgcaggctgctcaccaccatcggcaaggacctggactttgagaaggccaagcctcgcatg
gatcagtatttcaaccagatggagaaaatagttaaggagcggaagacatcgtctcggata
cggtttatgctgcaggacgtgatagacctccgattgcacaactgggtgtccaggagagct
gaccagggccctaagaccatcgagcagatccacaaagaggccaagattgaggagcaggag
gagcagaggaaggtgcaccagcagctgctctccaaggacaccaagagaaggccagagcaa
caacagcagcagagagaacagcaaagggagcagcagagggagcagcgtgtgcaacagaga
gacgagacctggaacactgtgcccatgaccaagaacagcaggacaatcgaccccaccaag
atccccaagatctccaagcctcagatggatgagaagatccaactaggaccacgagcctca
ctcaactggatgaagggcagcagcggaggggccaaggccagtgactccgaattatcccgg
tctggtggtggtggtggtgccagtttaaaccggtactctgcactccagtccactcaatct
catcaaaccaccccaccggcacagaacctagagtatgacactagaagaaccttgggcagt
cgaagcagtgcagggagagagcgaagtgagaagcccctgagcccagctccgtcgaggccc
ggttccttcgtccgaggcgggagtgccaaggagcttctggagagcccggccctgagccct
gaggagccccgcagagagctggagagccccagcgtaagcgaggacaagactgagccagag
cgaagcagtgccagggagcctgtgaaagcagagcctgtggtggcccagtctccagacaga
cctgccctctctgaggaggagatggagaggaagtccagagctatcattgacgagttcttg
cacatcaacgattataaggaggctgtgcagtgtgtggatgagctggacatgtcctctcag
ctccatgtgtttgtgcgtgtgggggtggagtccactctggagcgcagtcagatcacacgg
gaccacatgggcaagctcctcttccagttggtgcagcaggacatcctggccaagtcccaa
ttcttcaaagggtttgctgacacccttgagctggcggatgacatggccattgacattccc
catatctggctgtatctggccgagctgctcagccctgtgctgagagacaggggcttctct
atgagagagctctttagtgaattaagcaaacctttacttcctgtgggaagagctgggatc
ttattttctgaaatactgcacatactatgcaaacaaatgagccataggaaagtgggcacc
ttgtggagagagtcgggcctcagctggagtgacttcttgccagagggagaggatgtccag
gatttcatctcagagcagaagctccagttcactgaggcagactgctccagccatgaggca
gccctcgccacgacagcactgtcccctgtggtgctcaaccagcagctagaaaggctgctg
ctggaggacatggccagtgatgagcagatctttgactgggtagaggcaaatctagatgaa
tctcagatgagctcctctccgttcctgagagctctgatgacggctgtgtgtaaggcagcg
gtgaaagatgaaagtgcttcctgtcgagtggacgtagccatcattcagaggagattgccc
gtattactcaagtaccttaactcagacactgagcgacagcttcaagcactttatgcactg
caggcgctgatagtcactttggatcagcctcctaacctgctccggatgttctttgattgt
ctgtatgatgaggacgtcatctcggaggacgctttttacaagtgggagaccagcaaagac
ccagcagaggagctgggcaagggtgtggctctcaagtctgtaacggctttcttcacttgg
ctgagggaagccgaagaggagtcggaggataattga
DBGET
integrated database retrieval system
