Oncorhynchus keta (chum salmon): 118400317
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Entry
118400317 CDS
T09424
Name
(RefSeq) ras-related protein rab7-like
KO
K07897
Ras-related protein Rab-7A
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04137
Mitophagy - animal
oke04140
Autophagy - animal
oke04144
Endocytosis
oke04145
Phagosome
oke04148
Efferocytosis
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118400317
04145 Phagosome
118400317
04140 Autophagy - animal
118400317
04137 Mitophagy - animal
118400317
04148 Efferocytosis
118400317
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118400317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118400317
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118400317
04031 GTP-binding proteins [BR:
oke04031
]
118400317
Membrane trafficking [BR:
oke04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
118400317
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118400317
Exosomal proteins of other body fluids (saliva and urine)
118400317
Exosomal proteins of colorectal cancer cells
118400317
Exosomal proteins of bladder cancer cells
118400317
GTP-binding proteins [BR:
oke04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
118400317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
ATP_bind_1
cobW
PduV-EutP
nSTAND3
AAA_16
Septin
AAA_22
AAA_7
AAA_24
NTPase_1
AAA_5
ATPase_2
NACHT
ABC_tran
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
118400317
NCBI-ProteinID:
XP_035652915
LinkDB
All DBs
Position
21:24442692..24466569
Genome browser
AA seq
207 aa
AA seq
DB search
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKDNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDRNDRAKPSAEACSC
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaggaagaaagtgctcctgaaagtcatcatccttggggattctggagttggg
aagacctccctgatgaaccagtatgtgaataggaagttcagtaaccagtacaaagccaca
ataggagctgacttcctgaccaaggaggtgatggtggacgatcggctcgtcacaatgcag
atctgggacacggcagggcaggagaggttccagtctctgggtgtggcgttctaccgcggg
gcagactgctgtgtgctggtgtttgatgtgactgctcctaacaccttcaagactctagac
agctggagggacgagttcctcatccaggccagtcccagggaccccgagaacttccctttt
gtggtgctaggcaacaagatcgacctggagaacagacaggtgacgaccaagcgagctcag
gcatggtgtcagagtaaggacaacatcccctactttgagaccagtgctaaggaggccatc
aacgtagagcaggccttccagaccatcgcacgcaatgccctcaaacaggagacggaggtg
gagctgtataatgaattcccagaacccataaagctggacaggaatgatcgagcaaagcct
tcagcagaggcctgcagctgctga
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