Oncorhynchus keta (chum salmon): 118400349
Help
Entry
118400349 CDS
T09424
Name
(RefSeq) retinoic acid receptor gamma-like isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118400349
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oke03310
]
118400349
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118400349
Nuclear receptors [BR:
oke03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
118400349
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
118400349
NCBI-ProteinID:
XP_035652969
LinkDB
All DBs
Position
21:27644539..27721345
Genome browser
AA seq
492 aa
AA seq
DB search
MATNRERQVSHMTGFSPAVYPFAFNSMRSHSPFDLLANSSLFGRFGADLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLLESYELSG
ELEELVNKVSKAHKDTFPSLVQLGKYTTNSSADHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTELVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPQKVDKLQEPLLEALKIY
ARRRRPNKPHMFPRMLMKVTDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFED
SSDSGDSASAPPAIQAIKKEREEKSLEEEDEDEEDEWGDEERERGADSDGEPWGEAAAAE
AVSQKGETGRSQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaacagggaacggcaggtgagtcacatgactggcttttcacctgccgtttac
cccttcgccttcaactccatgaggagccactcacctttcgaccttctggccaatagcagc
ctctttggacgttttggggcagaccttccgaaagaaatggctgcattgtcagtggagacc
cagagcaccagctctgaggagatggtgcccagttcaccctctccaccccctcctccccgc
atttacaagccctgtttcgtgtgccaggacaagtcctctggctaccactatggggtcagc
tcctgtgagggttgcaagggattcttccggcgcagtattcagaagaacatggtgtatacc
tgccaccgagacaagaactgtcagatcaacaaggtgacccgtaatcgctgtcagtactgc
cggctgcaaaagtgctttgaggttggcatgtccaaagaagcggtgcgtaatgacaggaac
aagaagaagaaggatgtgaaggaggaggtggtgttgctggagagctatgagctcagtgga
gaactggaggagctagtcaacaaagtcagcaaggcccacaaagatacctttccctcactt
gtccagctgggcaaatacactacaaactccagtgcagaccaccgtgtacagttggatctg
gggctgtgggataagttcagtgaactctccaccaagtgcatcatcaagatagtggagttt
gccaagcgcctgccaggcttcaccaccctcaccatcgctgaccagatcactctcctcaaa
tcagcctgtctggatatactgatgctgagaatctgcactcgctacactccggagcaggac
acaatgaccttctccgacgggctgaccctgaaccggacccagatgcacaacgcaggcttt
ggccctctcacagagctggtgtttgcctttgctggccagctgctgcctctggagatggac
gacacagaaaccggcctcctcagcgccatctgcctgatctgtggagatcgtatggacctg
gaggagccccagaaggtggacaagctacaggaacccctcctggaggccctgaaaatctac
gcccgccgcagacgccccaacaagcctcacatgttcccccgcatgctgatgaaggtcacc
gacctcaggggcatcagcaccaagggtgctgagagagccatcactctgaagatggagatc
ccaggccccatgcctcctctgatcagggagatgctggagaacccagaggcctttgaggac
agcagcgactctggggacagcgcctccgccccccctgccatccaagccatcaagaaagag
agggaggagaagagcctcgaggaggaagatgaggatgaggaggacgagtggggggatgag
gagagggagaggggggcggacagtgatggggagccctggggggaggctgcagcggcagaa
gcggtgtcccagaaaggggaaactgggagatcccagtga
DBGET
integrated database retrieval system
