Oncorhynchus keta (chum salmon): 118400359
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Entry
118400359 CDS
T09424
Name
(RefSeq) LIM domain and actin-binding protein 1-like isoform X3
KO
K23026
LIM domain and actin-binding protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118400359
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
118400359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
118400359
NCBI-ProteinID:
XP_035653036
LinkDB
All DBs
Position
21:28172211..28219520
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AA seq
752 aa
AA seq
DB search
MEGGSSFSRRSWASQSLRVTARELSLVSTRGKTNAIAERFSKYQRAAEESNAEKKKASVE
SLHPTLRSGNLSVLKKRWEQPGPRQDRPAPLSNGPPRARLSPSAVPKPTPLTEHFPPAKS
PESLNTQGGQSTAFSRFQYPAAAAIAEEGQRGMEKKAQRPSEREEEKELMQVEDEVVPPS
PCTPIEKPSVPLNSLKMMFEKGEGTKGKVRTGLHSSSSEDMEQRLGVLSPDRVVETTSLK
ERMAKYQSAATKKGPLAHTTSQSEREYNSLKENVPPSGVAVSQALESYSRKVAVAETNGD
GMDISSFKGSTSSSSSVHSDLPKAAWKFCLSARETCITCLKTVYPLERLVANTQIFHTTC
FRCLHCNTKLSLGSYASLHGKVYCKPHFSQLFKAKGNYDEGFGHRPHKDLWTPRAEEEEE
EEEGVDRVVEMRSTEWAERTVAVSHPAETPLSPAKQSSPTVEESPLAKVTDLTASHETYS
HISSTEKLSTAEKVPEARRLRVAWPPPADSDAGASSALEGGGVGRPWRAKWPPEGEMSSS
TLSPDRAELKSLRRSSSLKERSRPFSVAPSLTNTNALGPREPRQPLKSLMDRRGSLEDSC
STLKEPEPQLQRGIEEEKEGSKPTPPSGSAVNGEINCEEVESLLATQDKKEEPMKKGKEA
AMEDEEERASLKCKSTSPDILASPPPQPKHNRSSQDVGFWEGEEGGEGEVEEGGEGEGEG
EEGGEGEGEQLTIEEMIKRNRYYEEEEEEDDV
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcggaagttcgttcagccgaaggtcgtgggcgtcgcagtctttacgcgtcact
gccagggagctctcattggtcagcacgcgaggcaagaccaacgccatcgcagagcgcttc
tccaagtaccaaagagctgctgaggagtctaatgcagagaagaagaaagcatcggtggag
agcctgcatcccaccctgcgttcagggaacctgagtgttctgaagaagcgctgggagcag
ccaggtcctcgccaagacagacctgccccgctatccaacgggccaccccgtgcccgcctc
tccccctctgccgtaccaaaaccaacccccctgaccgagcactttcccccagccaagtct
ccggaatccttgaacactcagggtggtcaaagcacagccttcagccgcttccagtatcct
gcagcagcagctatagccgaggagggacagagagggatggagaagaaagcgcagcggcca
agcgagcgagaggaggagaaagagctgatgcaggtggaagacgaggtggtgccacccagc
ccctgcacacccatcgagaaacccagcgtgcctctcaacagcctaaagatgatgtttgag
aagggagagggcaccaagggaaaggtgaggacaggactacacagcagctcctccgaggac
atggagcagagactaggagtgttgtcccctgacagagtggttgagactacctccctgaag
gaaagaatggccaagtaccagtcagccgctaccaaaaagggcccactagcacacactact
agtcagtcagagcgagagtataacagcctgaaggagaatgtgccccctagtggtgtggct
gtgagccaggctttagagtcctacagcagaaaagttgctgtagcagagaccaatggggat
ggcatggacatatctagttttaagggtagcacctcatcttcatcctcagtccacagtgac
ttgcccaaggcagcctggaagttctgcctttccgcgagggagacgtgcattacgtgccta
aagacagtgtacccgctggagaggctggtggccaacacccagatcttccacaccacctgc
ttccgctgtctccactgcaacaccaagctcagcctggggagctatgcctctctacacggt
aaggtctactgcaagccccacttcagccagctgttcaaggccaaaggcaactacgacgag
ggctttggccaccgcccccacaaggacctgtggacgccccgtgccgaggaagaggaggag
gaggaagaaggagtagaccgggtagtggagatgaggtctacggagtgggcagaaagaact
gtggcggtgtcccatccagccgagacaccactctccccagccaagcagtccagccccacg
gtggaggagtctcccctggccaaggtgacggacctgactgcctctcatgagacatacagc
cacatttcctccactgagaaactctccaccgccgagaaagtcccagaggcccgcaggctt
agggttgcctggccccctcctgctgacagtgatgctggagcctcttctgctctggagggt
ggtggtgtgggccggccctggagggccaagtggcccccggagggtgagatgtcatcgtcc
accctgagccccgacagggccgagctgaagagcctcaggaggagctcgtctctgaaggag
cgcagtcggcccttctcggtggcccccagcctcaccaacaccaatgccctggggccacgg
gagccccgccagcccctcaaatccttgatggacaggagggggtcgctggaggacagctgc
tccacgcttaaggaaccagaaccccaactccagagggggattgaggaggagaaagagggg
agtaagcccacaccgcccagcggcagtgcggtgaacggagagatcaactgcgaggaggtg
gagagtctcctggcaacgcaggacaagaaagaagagccgatgaagaaaggaaaagaagca
gcaatggaagatgaagaggaaagagcttctttaaaatgcaaaagtacctctccagacatc
ctagcatctccgcccccgcagcccaaacataaccgcagttcccaggacgtaggcttctgg
gagggggaggagggaggcgaaggggaggtggaggagggaggtgaaggcgaaggggagggg
gaggagggaggcgaaggggagggggaacagctcaccatagaggagatgatcaaaaggaac
cgctattatgaggaagaggaagaggaagatgacgtctga
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