Oncorhynchus keta (chum salmon): 118400403
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Entry
118400403 CDS
T09424
Name
(RefSeq) syntaxin-16-like isoform X1
KO
K08489
syntaxin 16
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
118400403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118400403
Membrane trafficking [BR:
oke04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
118400403
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Gene cluster
GFIT
Motif
Pfam:
SNARE
ATG17_like
Syntaxin_2
MCPsignal
DUF5345
Orf78
DUF2116
Motif
Other DBs
NCBI-GeneID:
118400403
NCBI-ProteinID:
XP_035653139
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Position
21:29202618..29215364
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AA seq
329 aa
AA seq
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MATRRLTDAFLLMRNNAIQNRHILAEQVSTYGTRRTLSTRSNAADAGPFTNAVYLADDRM
ALVSGIRLDPEAAIGVTKRLPPKWVDGVDEIQYDITRVQQKMKELAALHDKHMNRPTLDD
SSEEEHAIEITTQEITQMFHRCQRAVRGLQSRCGHCTEQEERLLRNVVSSLAGSLQELST
NFRHTQSSYLKRMKNREERSKHFFDSGPLMEEDEDIALYDRGFTGDQLVLVEQNTVMVEE
REREVRQIVQSISDLNEIFQDLAGLVVEQGTVLDRIDFNVEQSCVKTEEGLKQLQKAEQY
QKKNRKMLVILILTVIVVVLILILFGTKF
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaggcgcttgaccgatgccttcttattaatgcggaacaatgcaatccaaaat
cgtcatatattggctgagcaagtgagtacatacggcacccgtcgtactctgagtacacgt
agcaatgctgcggatgcagggccttttacaaatgctgtctatttggctgatgaccgcatg
gccctggtctctgggatacgtttggacccagaagctgccatcggagtcaccaagagactg
ccgcccaagtgggtagatggggtcgatgagattcagtatgacatcacacgggtccagcag
aaaatgaaggagctggccgccctccatgacaagcacatgaaccgtcccaccctggatgac
agcagtgaagaggagcatgccatagagatcactactcaggagatcacacagatgttccac
cggtgtcagcgtgcggtgagaggtctgcagtctcgctgtggccactgcacagagcaagag
gagaggcttctgagaaacgtggtgtcctcattggcagggagcctgcaggagctgtccacc
aacttcagacacacacagtccagttacctgaaacgcatgaagaatcgcgaggagagatca
aagcacttttttgactccggtcctctaatggaggaggatgaagacatagcactatatgac
agggggtttacaggtgaccagctggtcctggtagagcagaacacagtgatggtggaggaa
cgtgagagagaggtcagacagattgtccagtccatctctgacctgaatgagattttccaa
gacctggctggattggtggtggaacagggcacagtacttgacagaattgacttcaatgtg
gagcaatcgtgtgtcaaaacagaagaggggttgaaacagttacaaaaggctgaacagtat
cagaagaaaaaccgaaagatgctggtcattttaatccttactgttatagttgtcgttcta
atacttattctatttgggaccaagttctag
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