Oncorhynchus keta (chum salmon): 118400553
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Entry
118400553 CDS
T09424
Name
(RefSeq) syntaxin-18-like isoform X1
KO
K08492
syntaxin 18
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04130
SNARE interactions in vesicular transport
oke04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
118400553
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118400553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118400553
Membrane trafficking [BR:
oke04131
]
SNARE
Syntaxin (Qa)
Stx-rER
118400553
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
DUF6331
ACR_tran
DUF4559
DUF7165
Motif
Other DBs
NCBI-GeneID:
118400553
NCBI-ProteinID:
XP_035653416
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Position
21:complement(39393160..39427360)
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AA seq
331 aa
AA seq
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MAVDITLLFKASVKTVKTRNKAMGVVFDSLKDEIFKKSRPNNGFSLKAKEVISNITKLKD
FLLQHRKDYVNAGSLISSDLTRMTDNERDQIDQDAQIFMRTCSEAIKQLRSEAEKRVIST
QIKEHRGAVLDLIEMFLKGVCKLYSEQRAIRVKRVVDKKRLSRLEPEHHHSRMVVQKSPQ
VEQHSEEKTSKEESSSGERSVMEVPENTVSLWEEGQGRVDDELSPEEMQMFEQENQRLVS
EMSNLVDEVRQIEGKVVEISRLQEIFAEKVLMQETEIDSIHQLVVGATENVKEGNEDIRE
AIQNNAGFRVWILFFLVMCSFSLLFLDWYDS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgatataactttactgttcaaagccagtgtaaaaacggtcaaaaccagaaat
aaagctatgggagtagtgtttgattcgcttaaagatgaaatattcaagaagagcagaccg
aataacggattttctctcaaggcgaaagaagtgatctctaacatcaccaagctgaaagac
tttctactgcagcacaggaaggactatgtcaatgctggaagtctcatctcatcagatcta
acccggatgacagacaatgagcgagaccagatcgaccaggacgctcagatcttcatgaga
acctgctctgaagccatcaagcagctccgctctgaagctgagaaacgggtcatatcgacc
cagattaaagagcacaggggggcggtcctcgacctaatcgagatgtttttgaaaggagta
tgcaagctttattccgagcagagggctatacgagtgaagagagtggtagacaagaagaga
ctgtcccgactagagccagagcaccaccacagtaggatggtggtgcagaagagcccacag
gtggaacagcacagcgaggagaaaacatccaaggaggagagcagcagcggtgagcggagc
gtgatggaggtcccggagaacactgtgagcctgtgggaggagggccagggtcgtgtggat
gacgagctctcacctgaggagatgcagatgtttgaacaggagaaccagaggctggtgagt
gagatgagcaacctagtagatgaagtcaggcaaatcgaaggcaaggttgtcgaaatctca
cgtctccaggagatttttgcagagaaggtgctaatgcaagaaactgagatagacagtatc
catcagctagtcgtgggagccactgaaaacgtcaaagagggaaacgaggacatccgagag
gccatccaaaacaatgctggattccgtgtctggattctcttcttcctcgtcatgtgctcc
ttctctctgctcttcctggattggtatgacagctaa
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