Oncorhynchus keta (chum salmon): 118400598
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Entry
118400598 CDS
T09424
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118400598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118400598
Membrane trafficking [BR:
oke04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
118400598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF758
Motif
Other DBs
NCBI-GeneID:
118400598
NCBI-ProteinID:
XP_052333052
LinkDB
All DBs
Position
2:42918831..43041533
Genome browser
AA seq
1865 aa
AA seq
DB search
MVDKSIYIVQGEICTVVGAIKRNSRWNTHTPLDEEQDPLLNGFSHLKEILNNMKELSDVE
PNIFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDANHEAATEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSFVGANMKKLKMRAGGMSESSKWKKQKRSPHPPRHM
VRSASGGLEQAPTTTLSNNNLSGGVSFIEQDSLSVSDSVASSMSTPTDSGLDTCSKATSR
EDLTDLDQSSSAATTPSTEPGHLYTQSEGRQVEHAQSASVESIPEVLEDGESVTEHSDLA
SLHDMDYVNPRGVRFTPQQTQRDGAALIPYSLPCLRELFRFLISLTNPHDRHNTDAMMHM
GLQLLTVALEAAHIAPYQSLLGLVKDELCRHLFQLLSVDRMNLYAASIRACFLLFESMRG
HLKFQLEMYLKKLMDIITSENMKMPYEMKEMALEALVQLSRIPSFVTELYINHDCDFYCS
NLFEDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEAHCQAKVLNSTTQQDHSAEM
VLAEGECSTNDRTDTTTEASRQVNSANGQNVPEADSVPLPPTSGHLMAEKMRLGRQDQEE
TEPAEKKEPKKPQRFSSCLPDSQELLDIRNKKKLLNSGTEQFNQKPKKGIQFLQEKGLLS
SPMDNNEVAQWLRENPRLDKKQIGEFISDRKYMELLDSFVNTFTFRGLRIDEALRLYLEA
FRLPGEAPVIHRLLETFTDTWHKVNGSPFMTNDAGFALAYAVIMLNTDQHNNNVRKQNIP
MTIEQFKKNLKGVNGNTDFDQDMLEDIYNAIKNEEIVMPDEQSGLVKENYVWNVLLHRGA
TSEGVFLHVPAGSYDHDLFTMTWGPTIAALSYVFDKSLDDTIIQKAIAGFRKCAMISAHY
GFSDVFDNLIISLCKFTTLSSESVENLPTVFGSNGKAQIAAKTMFHLAHRHGDILREGWK
NIMDSMLQLFRAELLPKAMVEVEDFVEPNGTISLQREETPSNRGESAVLSFVNWLTLSGA
EQSGQRGPSTENQEAKQAAMLCIKQCDPEKLITESKFLQLESLQELMKALISVTPDEETY
DEEDAAFCLEMLLRIVMENRYRCVCLWQTVRDHLCHLCVQATESCFLVERAVVGLIRLAI
RLLRREDISSQVLLSLRLLLMMKPHVLARVSREVAYGLHELLKTNAANIHCTDDWFTLFA
LIECIGAGIKPPASFKVTSTTPDIDTGAQSDSELSFHHLSEVSLDRGYTSDSEVYTEHGK
SRMPRSVTDVDVTSSGWLVVGKDDLDISKVAASGSKTLANPLVNQYSLSLGQDMGFHDTK
SLIKCVESLSFIVRDAAHVTPENFELCVKAIRVFVEASLNGGYRTYEKKKNHKYDSQKSR
VRRKPRDKEGASRRAKASSQRPSRSHSDDEEDEGVPASYHTVSLQVSQDLLDLMHTLHTR
ASSIYSSWAEEQRRLEPVGKKIEADSQTLWTSCWCPLLQGIAWLCCDARRLVRMQALTYL
QRALLVHDLQTLDAVEWESCFNKVLFPLLTKLLDNISPADVCGMEETRMRACTLLSKVFL
QHLSPLLSLSTFTALWLTILDFMDKYMHAGSSDLLLEAIPESLKNMLLVMDTAGIFHSAD
SRTGYSDLWEITWERIDCFLPNLREELFKQTVIPQPDPAPSPPVELVQQAAPCPPASPPP
AQALSPVPVPASPTEPKTSSRPVSPQDPPPPSTNGTDRSSPVPPSTPPMPTPVKMSPQIS
SPLIQSPTSQSPLILQPLASHLQVGGVPPMSLPIILNPALIEASCPVPLLPAPHPTEHSD
TPQVK
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaagagtatatacattgtccaaggggagatctgtactgttgtaggtgccatc
aagaggaattcaaggtggaatacccatactcctttggatgaggaacaagatccattgctt
aacggtttcagccacctgaaagagattctcaacaatatgaaagagctgtcagatgtggag
cccaacatattcctgcgtcccttcctggaggtggtacgatctgaagataccaccggacca
atcacaggcctggccctcacctctgtcaacaagttcctttcctacggcctcatagatgct
aaccatgaggcggcgacggaggccatcgagaacatggcggatgccgtcacacacgccaga
ttcgtagggacggaccccgccagcgatgaagtagtgctcatgaaaatcctacaggtcctg
aggactttgctgctcacgcccgtaggagcccacctgaccaacgagtctgtgtgtgagatc
atgcagtcgtgtttccgcatctgcttcgagatgcgcctcagcgagctcctgaggaaatca
gccgaacacacactggtggatatggtgcagctgctgttttccagactaccccagtttaaa
gaggaggccaaaagttttgtgggcgccaacatgaagaagctgaagatgcgtgctggtggg
atgagtgagtcgtcaaagtggaagaagcagaagcgctcgccccaccccccccgccacatg
gtgcgaagtgcctcgggcggattggagcaggcccctaccaccaccctcagcaacaacaac
ctctctggtggagtctcattcatcgagcaggatagtttgtctgtttcagacagcgtggcc
tcctccatgtccacccccacagacagtggcctggacacctgctccaaggccacctccaga
gaggacctgacagacctggaccagagcagctctgccgccaccaccccttccacagagcct
ggacacctgtacactcagtctgagggtaggcaggtggagcatgcccagtcagcctcggtg
gagtccatccctgaggtcctggaggacggagaatctgtgacagagcattcggacttagcc
tcattacatgacatggactatgtcaacccccgaggagtccgcttcacaccacagcaaaca
cagagagacggtgcggctctcatcccctactccctgccctgtctgcgggagctcttccgc
ttcctcatctcactgaccaacccccatgaccgccacaacacggacgccatgatgcacatg
ggcctgcagttgctgaccgtggctctggaggcggctcacatcgccccctaccagtcactg
ctgggcctggtcaaagacgaactctgcagacacctcttccagttgctaagtgtggaccgt
atgaacctgtatgccgcctccatccgagcgtgcttcttactctttgagagcatgcgagga
catttgaagtttcagctcgagatgtatctgaagaagctgatggacatcatcacgtcagag
aacatgaagatgccctatgagatgaaggagatggccctggaggccctggtgcagctttcg
aggatccccagcttcgtcaccgagctctacatcaatcatgactgtgacttctactgctca
aacctgtttgaagacctcaccaagctgctctccaagaatgccttccctgtgtccggacag
ctctacacaacccacctcctctcactagaggccctactcactgtgattgacagcactgag
gcccactgccaggcaaaggtgctcaacagcaccactcagcaggaccactcagcagaaatg
gtgttggcagaaggggagtgctcaaccaacgaccgtacagacacaaccacggaagcgagc
aggcaggtgaacagtgccaacggtcagaatgttccagaggctgacagtgtgcccctacca
cctaccagcgggcacctgatggcagagaagatgagactgggcagacaagaccaggaggag
acagaaccagctgagaagaaagaaccaaaaaagccacaacgcttctcgtcttgtttaccg
gattctcaagagctgttggacatcagaaataaaaagaagctgctgaacagtggcacagag
cagttcaaccagaagcctaagaagggcatccagttcctgcaggagaagggtctcctcagc
agccccatggacaacaacgaggtggcccagtggctccgggagaacccccgcctcgacaag
aagcagatcggagagttcatcagtgaccgcaaatatatggagctactggacagctttgtc
aacacgttcaccttccgagggctgcgtattgacgaggcgctgcgtctgtatctggaggcc
ttcagactgccaggagaggctccggtcatccatagacttttggaaaccttcacagacacc
tggcataaagtgaacggctctcccttcatgaccaacgacgcaggcttcgccctggcctat
gctgtcatcatgctcaacacggaccagcacaacaacaatgtgcgcaagcagaacatcccc
atgactattgagcaattcaagaagaatctgaagggtgtgaatggaaatacagactttgat
caggatatgctggaggacatctacaatgcaatcaagaatgaagagatagtgatgccagac
gagcagtctggcctggtgaaggagaactatgtatggaacgtgctgctccaccggggggcc
acctccgagggggtcttcctccatgtgcctgccggcagctacgaccatgacctgttcacc
atgacctgggggcccaccatcgcagccctctcctacgtcttcgacaagagcctggacgac
acaatcatccagaaggccatagctggctttaggaaatgtgccatgatatcagctcattat
ggattcagtgacgtttttgataatttgatcatttccctctgcaagtttacaacgctcagc
agtgagtcggtggagaacctgcccacagtgtttgggagtaacgggaaggcacagatagcg
gcgaaaacgatgttccacctcgcccaccggcacggtgacatcctgagggagggctggaaa
aacatcatggactccatgctgcagctgttcagagccgagctgctgcccaaggccatggtg
gaggtggaggattttgtggagccaaatggaacgatttcccttcaaagagaagagacaccg
tcaaatcggggtgagtctgcagtgctgagctttgtgaactggctgacactgagtggagcg
gagcagtctggtcaacgtgggccctctactgagaaccaggaggccaagcaggcagccatg
ctctgtatcaagcaatgtgacccagagaagctgatcacagagagtaaattcctgcagctg
gagtctctacaggagctgatgaaggccttgatctcagtcacacctgatgaggagacgtat
gatgaggaggatgctgcattctgcctggagatgctgctacgcatagtcatggagaacagg
tacaggtgtgtgtgtttatggcagacggtgcgagatcacctgtgccacctgtgtgtccag
gctacagagagctgcttcctggtggagagggccgtggtgggcctcatcagactggccatc
cgcctgctgcgcagagaggacatcagctcccaggtgctgctgtccctgcgtctcctgttg
atgatgaaaccacacgtcctggcccgggttagccgggaggtggcctatggcctccatgag
ctgcttaagaccaacgctgccaacatccactgcacagacgactggttcacccttttcgcc
ctaatcgagtgcatcggggccgggatcaaaccgcccgcctccttcaaggtcacctctact
accccagacatcgacacaggtgcccagtcggacagtgagctgtcgttccaccacctcagt
gaggtgagtctggaccgggggtacacctcagactctgaggtctacacagagcatggaaag
tccaggatgccccgctctgtcactgacgtggacgtgactagcagcggatggctagtggtt
gggaaagacgacctggacatcagcaaggtagcggcttctggatccaagaccctggcaaac
cctctagtgaaccagtacagcctgtccctgggtcaagacatgggtttccacgacaccaag
tctctcatcaagtgtgtggagtccctctccttcatagtacgagatgctgcacatgtcacc
cccgagaactttgagctgtgtgtcaaggccatccgggtgtttgtggaggccagcctaaac
ggaggctacaggacctatgagaagaagaagaaccacaagtacgactcccagaagtcccgt
gtgaggaggaagccccgggacaaggagggtgcgtcccgccgcgccaaggcctccagccag
aggccttcccgttcccatagcgatgacgaggaagacgagggggtccctgccagctaccac
acggtgtcattacaggttagtcaggacctgttagatctgatgcacacgctgcatacgagg
gcctccagcatctacagctcctgggcagaggagcagcgccgcctggagccagtagggaag
aagattgaggccgactcccagacactgtggaccagctgctggtgcccactgctccaaggg
atagcctggctgtgctgcgacgccaggaggctggtgcgaatgcaggccctgacctacctc
cagagggcactgttggtccatgacctgcagacactagatgctgtggagtgggagtcctgc
tttaacaaggtgctgttccccctgctgaccaagcttctggacaatattagccctgcagac
gtgtgtggcatggaggagaccaggatgagggcttgcaccctgctgtcaaaggtgttcctg
cagcacctctctcccttgttgtctctgtccaccttcactgccctgtggctcaccatcctg
gacttcatggacaagtacatgcacgctggctccagtgacctgctgctggaggccatccca
gagtctctgaagaacatgctgctggtgatggacacagcaggaatcttccacagcgctgac
tctcgtacgggatactctgacctgtgggagatcacttgggaacgcatcgactgcttcctg
cctaacctccgggaggagctcttcaaacagacagtcataccacaaccagatcctgctcct
agtcccccagtggagcttgtccagcaggctgccccctgccccccagcctcgccaccccca
gctcaggccctatctcctgtgccagtgccagcttcccccacagagccaaagacctccagc
agaccagtgtcgccccaagatcccccaccacctagtaccaacggaacagacagatcatct
ccagtgcctccatcgactccccccatgcccaccccagtgaagatgtccccccagatctct
agcccactgatccagtcccccacgagtcagtcccccctcatcctgcagcccctggcctcc
catctgcaggtggggggcgtgccccctatgtccctccccattatcctcaaccccgccctc
attgaggccagttgccctgtcccgctgctccccgcccctcaccccactgaacatagtgac
accccgcaggtcaaatag
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